Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_CPg0502841 Rosa chinensis HOM05D008285 ORTHO05D010431 4.8e-21 103.6 53 100.0
RcHm_v2.0_Chr4g0421191 Rosa chinensis HOM05D008285 ORTHO05D010431 2.4e-20 101.3 53 98.1
Gohir.1Z049931 Gossypium hirsutum HOM05D008285 ORTHO05D010431 2.7e-16 87.8 47 91.5
Gohir.A02G134106 Gossypium hirsutum HOM05D008285 ORTHO05D010431 2.7e-16 87.8 47 91.5
Gorai.009G442800 Gossypium raimondii HOM05D008285 ORTHO05D010431 2.7e-16 87.8 47 91.5
Nn031s41612 Nelumbo nucifera HOM05D008285 ORTHO05D010431 4.6e-16 87.0 47 93.6
Nn064s42214 Nelumbo nucifera HOM05D008285 ORTHO05D010431 4.6e-16 87.0 47 93.6
SalBow1G4672 Salvia bowleyana HOM05D008285 ORTHO05D010431 4.6e-16 87.0 53 86.8
SalBow1G6462 Salvia bowleyana HOM05D008285 ORTHO05D010431 4.6e-16 87.0 53 86.8
Gohir.1Z049481 Gossypium hirsutum HOM05D008285 ORTHO05D010431 6.0e-16 86.7 47 91.5
Hma1.2p1_0859F.1_g229500 Hydrangea macrophylla HOM05D008285 ORTHO05D010431 7.9e-16 86.3 53 86.8
Gohir.A01G140110 Gossypium hirsutum HOM05D008285 ORTHO05D010431 1.0e-15 85.9 47 89.4
ATCG01020 Arabidopsis thaliana HOM05D008285 ORTHO05D010431 1.8e-15 85.1 53 83.0
C09p40390 Brassica napus HOM05D008285 ORTHO05D010431 1.8e-15 85.1 53 83.0
BolSC29t60502H Brassica oleracea HOM05D008285 ORTHO05D010431 1.8e-15 85.1 53 83.0
BolSC35t60700H Brassica oleracea HOM05D008285 ORTHO05D010431 1.8e-15 85.1 53 83.0
BolSC44t60819H Brassica oleracea HOM05D008285 ORTHO05D010431 1.8e-15 85.1 53 83.0
BraSC103t45425Z Brassica rapa HOM05D008285 ORTHO05D010431 1.8e-15 85.1 53 83.0
BraSC138t45538Z Brassica rapa HOM05D008285 ORTHO05D010431 1.8e-15 85.1 53 83.0
BraSC25t45906Z Brassica rapa HOM05D008285 ORTHO05D010431 1.8e-15 85.1 53 83.0
BraSC59t46547Z Brassica rapa HOM05D008285 ORTHO05D010431 1.8e-15 85.1 53 83.0
PGSC0003DMG400000878 Solanum tuberosum HOM05D008285 ORTHO05D010431 1.8e-15 85.1 47 91.5
PGR111G0120 Punica granatum HOM05D008285 ORTHO05D010431 2.3e-15 84.7 47 91.5
CSS0043912 Camellia sinensis var. sinensis HOM05D008285 ORTHO05D010431 3.0e-15 84.3 54 85.2
C02p28770 Brassica napus HOM05D008285 ORTHO05D010431 5.1e-15 83.6 53 81.1
BolC2t08924H Brassica oleracea HOM05D008285 ORTHO05D010431 5.1e-15 83.6 53 81.1
PSO548G0110 Papaver somniferum HOM05D008285 ORTHO05D010431 5.1e-15 83.6 53 88.7
Gohir.A12G229600 Gossypium hirsutum HOM05D008285 ORTHO05D010431 6.7e-15 83.2 47 85.1
PSO063G2603 Papaver somniferum HOM05D008285 ORTHO05D010431 6.7e-15 83.2 52 82.7
BolC9t56929H Brassica oleracea HOM05D008285 ORTHO05D010431 8.7e-15 82.8 53 81.1
Manes.18G138300 Manihot esculenta HOM05D008285 ORTHO05D010431 8.7e-15 82.8 47 89.4
BolC9t56809H Brassica oleracea HOM05D008285 ORTHO05D010431 1.1e-14 82.4 53 81.1
Nn212s45209 Nelumbo nucifera HOM05D008285 ORTHO05D010431 1.1e-14 82.4 48 91.7
CARHR282410 Cardamine hirsuta HOM05D008285 ORTHO05D010431 1.5e-14 82.0 53 83.0
PSO339G5238 Papaver somniferum HOM05D008285 ORTHO05D010431 1.5e-14 82.0 52 80.8
CAN.G1045.12 Capsicum annuum HOM05D008285 ORTHO05D010431 2.5e-14 81.3 47 87.2
CAN.G1045.15 Capsicum annuum HOM05D008285 ORTHO05D010431 2.5e-14 81.3 47 87.2
CAN.G222.14 Capsicum annuum HOM05D008285 ORTHO05D010431 2.5e-14 81.3 47 87.2
CAN.G413.8 Capsicum annuum HOM05D008285 ORTHO05D010431 2.5e-14 81.3 47 87.2
CAN.G657.10 Capsicum annuum HOM05D008285 ORTHO05D010431 2.5e-14 81.3 47 87.2
HanXRQCPg0580381 Helianthus annuus HOM05D008285 ORTHO05D010431 2.5e-14 81.3 53 86.8
MBI10_g47591_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 3.3e-14 80.9 47 85.1
Nn8g41105 Nelumbo nucifera HOM05D008285 ORTHO05D010431 4.3e-14 80.5 47 87.2
CAN.G1431.2 Capsicum annuum HOM05D008285 ORTHO05D010431 7.4e-14 79.7 47 85.1
CAN.G965.8 Capsicum annuum HOM05D008285 ORTHO05D010431 1.3e-13 79.0 47 85.1
Solyc03g013610.1 Solanum lycopersicum HOM05D008285 ORTHO05D010431 1.6e-13 78.6 52 78.8
DCAR_032534 Daucus carota HOM05D008285 ORTHO05D010431 2.1e-13 78.2 47 87.2
CAN.G8.24 Capsicum annuum HOM05D008285 ORTHO05D010431 3.7e-13 77.4 47 83.0
CAN.G1324.6 Capsicum annuum HOM05D008285 ORTHO05D010431 6.2e-13 76.6 47 83.0
Nitab4.5_0015353g0010 Nicotiana tabacum HOM05D008285 ORTHO05D010431 6.2e-13 76.6 45 88.9
CAN.G213.15 Capsicum annuum HOM05D008285 ORTHO05D010431 8.1e-13 76.3 54 75.9
Nn1g08636 Nelumbo nucifera HOM05D008285 ORTHO05D010431 8.1e-13 76.3 47 83.0
BolC2t10592H Brassica oleracea HOM05D008285 ORTHO05D010431 1.4e-12 75.5 49 79.6
CAN.G262.5 Capsicum annuum HOM05D008285 ORTHO05D010431 3.1e-12 74.3 52 75.0
SGA_v2.0_scaffold36G14477 Striga asiatica HOM05D008285 ORTHO05D010431 3.1e-12 74.3 46 82.6
Medtr4g006140 Medicago truncatula HOM05D008285 ORTHO05D010431 6.9e-12 73.2 52 75.0
Lalb_Chr07g0191721 Lupinus albus HOM05D008285 ORTHO05D010431 2.6e-11 71.2 48 77.1
Aqoxy1G03262 Aquilegia oxysepala HOM05D008285 ORTHO05D010431 5.8e-11 70.1 47 78.7
BolSC45t60913H Brassica oleracea HOM05D008285 ORTHO05D010431 9.9e-11 69.3 48 81.2
Psat5g142800 Pisum sativum HOM05D008285 ORTHO05D010431 2.9e-10 67.8 46 73.9
Potri.009G163200 Populus trichocarpa HOM05D008285 ORTHO05D010431 1.1e-09 65.9 45 77.8
SMO230G0005 Selaginella moellendorffii HOM05D008285 ORTHO05D010431 2.5e-06 54.7 51 58.8


User provided reference genes

Program Settings