Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 7.0e-41 170.2 89 100.0
RcHm_v2.0_CPg0502811 Rosa chinensis HOM05D001200 ORTHO05D010401 7.0e-41 170.2 89 100.0
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 4.5e-40 167.5 89 98.9
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 3.0e-36 154.8 89 89.9
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.1e-35 152.9 86 90.7
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.1e-35 152.9 86 90.7
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 4.4e-35 151.0 89 84.3
Ciclev10030459m.g Citrus clementina HOM05D001200 ORTHO05D010401 7.4e-35 150.2 83 91.6
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 9.7e-35 149.8 88 85.2
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 1.3e-34 149.4 89 85.4
Gohir.A02G134201 Gossypium hirsutum HOM05D001200 ORTHO05D010401 1.7e-34 149.1 89 85.4
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 8.2e-34 146.7 87 87.4
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 8.2e-34 146.7 87 87.4
GSVIVG01004976001 Vitis vinifera HOM05D001200 ORTHO05D010401 8.2e-34 146.7 89 85.4
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 1.1e-33 146.4 87 85.1
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 1.1e-33 146.4 85 85.9
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 1.1e-33 146.4 85 85.9
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 1.1e-33 146.4 85 85.9
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 1.4e-33 146.0 87 86.2
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 1.4e-33 146.0 87 86.2
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 82.0
Gorai.012G007400 Gossypium raimondii HOM05D001200 ORTHO05D010401 1.8e-33 145.6 89 84.3
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 82.0
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 82.0
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 82.0
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 82.0
HanXRQChr06g0183001 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 82.0
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 82.0
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 82.0
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-33 145.6 89 82.0
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 4.1e-33 144.4 89 83.1
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 1.6e-32 142.5 84 83.3
Phvul.002G050301 Phaseolus vulgaris HOM05D001200 ORTHO05D002731 2.6e-32 141.7 85 84.7
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 3.5e-32 141.4 89 82.0
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 1.7e-31 139.0 89 79.8
Migut.D01255 Erythranthe guttata HOM05D001200 ORTHO05D010401 3.8e-31 137.9 89 78.7
Oeu048498.1 Olea europaea HOM05D001200 ORTHO05D010401 6.5e-31 137.1 81 84.0
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 8.5e-31 136.7 86 81.4
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 1.1e-30 136.3 89 78.7
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 1.5e-30 136.0 87 79.3
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 1.5e-30 136.0 87 79.3
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 1.5e-30 136.0 87 79.3
BolSC35t60702H Brassica oleracea HOM05D001200 ORTHO05D002731 1.5e-30 136.0 87 79.3
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 1.5e-30 136.0 87 79.3
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 1.5e-30 136.0 87 79.3
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 1.5e-30 136.0 87 79.3
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 9.4e-30 133.3 85 82.4
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 1.2e-29 132.9 87 77.0
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 2.7e-29 131.7 77 87.0
BolSC45t60911H Brassica oleracea HOM05D001200 ORTHO05D010401 1.2e-27 126.3 77 81.8
BraSC25t45908Z Brassica rapa HOM05D001200 ORTHO05D010401 2.6e-27 125.2 78 80.8
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 1.7e-26 122.5 88 72.7
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 5.9e-24 114.0 63 92.1
MBI10_g47590_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 5.9e-24 114.0 69 78.3
CAN.G386.25 Capsicum annuum HOM05D001200 ORTHO05D010401 5.0e-23 110.9 66 80.3
C06p42260 Brassica napus HOM05D001200 ORTHO05D010401 3.0e-20 101.7 60 80.0
Oeu012765.1 Olea europaea HOM05D001200 ORTHO05D002731 7.5e-19 97.1 89 62.9
Solyc11g021213.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 8.3e-18 93.6 87 64.4
Hund08792 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund12715 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund12842 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund23967 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund27632 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund27679 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund27756 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund27832 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund28331 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund28439 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund28447 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund28537 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund28586 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund28595 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund28849 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund28945 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund28950 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund28955 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund28960 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund28973 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29027 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29090 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29108 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29180 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29185 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29243 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29248 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29250 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29255 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29262 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29272 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29276 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29280 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29284 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29289 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29317 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29435 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29437 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29452 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29498 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29653 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 65.0
Hund29714 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29756 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29813 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund29817 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund30037 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund30038 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund30121 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Hund30178 Selenicereus undatus HOM05D001200 ORTHO05D010401 1.1e-17 93.2 80 66.2
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 1.8e-17 92.4 89 59.6
Hund28980 Selenicereus undatus HOM05D001200 ORTHO05D010401 5.4e-17 90.9 80 65.0
Solyc01g065620.1 Solanum lycopersicum HOM05D001200 ORTHO05D010401 7.0e-17 90.5 70 68.6
Solyc01g065640.3 Solanum lycopersicum HOM05D001200 ORTHO05D010401 6.6e-15 84.0 62 67.7
arahy.Tifrunner.gnm1.ann1.2QK9Z7 Arachis hypogaea HOM05D001200 ORTHO05D002731 2.8e-13 78.6 86 53.5
Oeu012819.1 Olea europaea HOM05D001200 ORTHO05D002731 1.5e-11 72.8 76 56.6
Potri.008G202133 Populus trichocarpa HOM05D001200 ORTHO05D002731 9.8e-11 70.1 68 57.4
CAN.G95.10 Capsicum annuum HOM05D001200 ORTHO05D002731 1.3e-10 69.7 45 73.3
Lalb_Chr07g0191751 Lupinus albus HOM05D001200 ORTHO05D002731 2.2e-10 68.9 54 70.4
SMO086G0020 Selaginella moellendorffii HOM05D001200 ORTHO05D002731 2.8e-10 68.6 72 54.2
HanXRQChr08g0211981 Helianthus annuus HOM05D001200 ORTHO05D002731 6.3e-10 67.4 41 82.9
Solyc02g011740.1 Solanum lycopersicum HOM05D001200 ORTHO05D010401 1.4e-09 66.2 51 62.7
SabraPtG0005600 Salix brachista HOM05D000533 ORTHO05D006151 1.8e-09 65.9 64 56.2
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 2.4e-09 65.5 59 59.3
MD04G1189100 Malus domestica HOM05D001200 ORTHO05D002731 7.0e-09 63.9 35 94.3
HanXRQChr00c0894g0577811 Helianthus annuus HOM05D001200 ORTHO05D002731 2.0e-08 62.4 91 45.1


User provided reference genes

Program Settings