Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0202431 Rosa chinensis HOM05D008644 ORTHO05D010816 2.0e-29 131.7 66 100.0
RcHm_v2.0_CPg0502061 Rosa chinensis HOM05D008644 ORTHO05D010816 2.0e-29 131.7 66 100.0
MD06G1065900 Malus domestica HOM05D008644 ORTHO05D010816 1.2e-21 105.9 56 92.9
ClCG02G011240 Citrullus lanatus HOM05D008644 ORTHO05D010816 3.5e-21 104.4 70 80.0
Nitab4.5_0001152g0400 Nicotiana tabacum HOM05D002194 ORTHO05D002840 1.7e-15 85.5 69 66.7
PGR111G0013 Punica granatum HOM05D008644 ORTHO05D010816 1.2e-13 79.3 41 97.6
Glyma.12G232800 Glycine max HOM05D008644 ORTHO05D010816 1.6e-13 79.0 41 97.6
Hund12893 Selenicereus undatus HOM05D008644 ORTHO05D010816 1.6e-13 79.0 40 97.5
Hund31441 Selenicereus undatus HOM05D008644 ORTHO05D010816 1.6e-13 79.0 40 97.5
Gohir.D10G212950 Gossypium hirsutum HOM05D008644 ORTHO05D010816 2.7e-13 78.2 41 97.6
DCAR_032498 Daucus carota HOM05D008644 ORTHO05D010816 4.5e-13 77.4 41 95.1
ATCG00550 Arabidopsis thaliana HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BNapus_Darmor_BZH_scaffold_287p00160 Brassica napus HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BolSC29t60469H Brassica oleracea HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BolSC29t60592H Brassica oleracea HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BolSC35t60650H Brassica oleracea HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BolSC35t60747H Brassica oleracea HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BolSC46t61003H Brassica oleracea HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BolSC46t61032H Brassica oleracea HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BolSC47t61094H Brassica oleracea HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BolSC49t61180H Brassica oleracea HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BraA06t25420Z Brassica rapa HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BraSC103t45463Z Brassica rapa HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BraSC103t45469Z Brassica rapa HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BraSC138t45573Z Brassica rapa HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BraSC25t45851Z Brassica rapa HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BraSC58t46423Z Brassica rapa HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
BraSC59t46588Z Brassica rapa HOM05D008644 ORTHO05D010816 5.9e-13 77.0 41 92.7
Gohir.A04G059100 Gossypium hirsutum HOM05D008644 ORTHO05D010816 1.3e-12 75.9 41 92.7
BolC8t52429H Brassica oleracea HOM05D008644 ORTHO05D010816 2.3e-12 75.1 39 89.7
Gohir.D06G105400 Gossypium hirsutum HOM05D008644 ORTHO05D010816 2.3e-12 75.1 41 95.1
Lsat_1_v5_gn_4_50801 Lactuca sativa HOM05D000216 ORTHO05D010816 5.0e-12 73.9 41 87.8
Gohir.D01G101904 Gossypium hirsutum HOM05D008644 ORTHO05D010816 8.6e-12 73.2 41 92.7
PSO548G0116 Papaver somniferum HOM05D008644 ORTHO05D010816 1.1e-11 72.8 41 87.8
Gohir.A04G003900 Gossypium hirsutum HOM05D008644 ORTHO05D010816 4.3e-11 70.9 41 87.8
CAN.G885.5 Capsicum annuum HOM05D008644 ORTHO05D010816 5.6e-11 70.5 41 87.8
CAN.G882.3 Capsicum annuum HOM05D008644 ORTHO05D010816 9.5e-11 69.7 41 87.8
Gohir.A07G094400 Gossypium hirsutum HOM05D008644 ORTHO05D010816 1.6e-10 68.9 41 90.2
Gohir.A08G088600 Gossypium hirsutum HOM05D008644 ORTHO05D010816 2.8e-10 68.2 41 87.8
ClCG09G011570 Citrullus lanatus HOM05D005106 ORTHO05D006224 6.1e-10 67.0 40 80.0
Gohir.D05G322750 Gossypium hirsutum HOM05D008644 ORTHO05D010816 1.4e-09 65.9 38 86.8
Gohir.A05G221550 Gossypium hirsutum HOM05D008644 ORTHO05D010816 1.8e-09 65.5 41 82.9
FAN01G1944 Fragaria x ananassa HOM05D002194 ORTHO05D002840 2.3e-09 65.1 66 63.6
Gohir.A02G018302 Gossypium hirsutum HOM05D008644 ORTHO05D010816 6.8e-09 63.5 41 82.9
Migut.N00910 Erythranthe guttata HOM05D008644 ORTHO05D010816 2.0e-08 62.0 35 85.7
Gohir.D07G234250 Gossypium hirsutum HOM05D008644 ORTHO05D010816 1.3e-07 59.3 41 75.6
MBI04_g06628_MAGBIO Magnolia biondii HOM05D002194 ORTHO05D002840 2.9e-07 58.2 62 58.1
Phvul.002G236100 Phaseolus vulgaris HOM05D008644 ORTHO05D010816 6.4e-07 57.0 37 81.1
BraSC25t45863Z Brassica rapa HOM05D008644 ORTHO05D010816 1.9e-06 55.5 29 89.7
Gohir.A01G154450 Gossypium hirsutum HOM05D008644 ORTHO05D010816 3.2e-06 54.7 41 73.2
Gohir.A04G096550 Gossypium hirsutum HOM05D008644 ORTHO05D010816 7.0e-06 53.5 29 93.1


User provided reference genes

Program Settings