Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_CPg0501791 Rosa chinensis HOM05D008299 ORTHO05D010400 5.7e-52 207.2 98 100.0
RcHm_v2.0_CPg0502621 Rosa chinensis HOM05D008299 ORTHO05D010400 2.1e-30 135.6 98 70.4
RcHm_v2.0_Chr5g0051131 Rosa chinensis HOM05D008299 ORTHO05D010400 2.3e-29 132.1 98 69.4
Potri.019G028450 Populus trichocarpa HOM05D008299 ORTHO05D010400 1.8e-13 79.3 58 67.2
Medtr0002s0330 Medicago truncatula HOM05D008299 ORTHO05D010400 5.7e-12 74.3 60 68.3
CAN.G343.2 Capsicum annuum HOM05D000445 ORTHO05D010400 7.5e-12 73.9 33 90.9
CAN.G219.11 Capsicum annuum HOM05D000445 ORTHO05D010400 9.8e-12 73.6 40 72.5
CAN.G1298.15 Capsicum annuum HOM05D008299 ORTHO05D010400 3.7e-11 71.6 33 87.9
Solyc11g018700.3 Solanum lycopersicum HOM05D008299 ORTHO05D010400 3.7e-11 71.6 33 87.9
CSS0008439 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 4.8e-11 71.2 34 88.2
CSS0021182 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 4.8e-11 71.2 34 88.2
CAN.G100.36 Capsicum annuum HOM05D008299 ORTHO05D010400 6.3e-11 70.9 33 87.9
CAN.G1648.16 Capsicum annuum HOM05D008299 ORTHO05D010400 1.8e-10 69.3 33 84.8
CAN.G719.1 Capsicum annuum HOM05D008299 ORTHO05D010400 9.1e-10 67.0 33 81.8
Migut.L00537 Erythranthe guttata HOM05D008299 ORTHO05D010400 2.0e-09 65.9 34 79.4
Solyc00g500038.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 2.0e-09 65.9 31 83.9
Solyc00g500045.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 2.0e-09 65.9 31 83.9
Solyc00g500082.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 2.0e-09 65.9 31 83.9
Solyc00g500127.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 2.0e-09 65.9 31 83.9
Solyc00g500197.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 2.0e-09 65.9 31 83.9
Solyc00g500300.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 2.0e-09 65.9 31 83.9
Solyc00g500326.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 2.0e-09 65.9 31 83.9
ClCG00G002340 Citrullus lanatus HOM05D008299 ORTHO05D010400 2.7e-09 65.5 30 93.3
Solyc01g017080.2 Solanum lycopersicum HOM05D008299 ORTHO05D010400 2.7e-09 65.5 40 65.0
Gohir.A09G103316 Gossypium hirsutum HOM05D000216 ORTHO05D000634 5.9e-09 64.3 30 90.0
CAN.G129.17 Capsicum annuum HOM05D008299 ORTHO05D010400 1.7e-08 62.8 31 80.6
Solyc01g017150.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 5.0e-08 61.2 33 72.7
Solyc02g011920.2 Solanum lycopersicum HOM05D000445 ORTHO05D000314 5.0e-08 61.2 40 65.0
Solyc11g021080.3 Solanum lycopersicum HOM05D008299 ORTHO05D010400 6.5e-08 60.8 33 75.8
SGA_v2.0_scaffold379G50347 Striga asiatica HOM05D008299 ORTHO05D010400 4.2e-07 58.2 34 73.5
MD11G1013500 Malus domestica HOM05D008299 ORTHO05D010400 2.1e-06 55.8 27 92.6
MD17G1255700 Malus domestica HOM05D008299 ORTHO05D010400 2.1e-06 55.8 27 92.6
Solyc03g058240.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 6.1e-06 54.3 33 66.7


User provided reference genes

Program Settings