Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_CPg0501731 Rosa chinensis HOM05D012647 ORTHO05D010933 1.5e-25 118.6 55 100.0
Oeu060399.1 Olea europaea HOM05D012647 ORTHO05D010933 2.3e-18 94.7 55 80.0
SabraPtG0006400 Salix brachista HOM05D012647 ORTHO05D014727 6.2e-16 86.7 48 81.2
Gohir.D02G117576 Gossypium hirsutum HOM05D008931 ORTHO05D010933 1.3e-13 79.0 48 77.1
arahy.Tifrunner.gnm1.ann1.FVNR0N Arachis hypogaea HOM05D008931 ORTHO05D010933 5.5e-12 73.6 37 83.8
arahy.Tifrunner.gnm1.ann1.CA7A2G Arachis hypogaea HOM05D000580 ORTHO05D001362 1.0e-10 69.3 36 80.6
Gohir.A03G085801 Gossypium hirsutum HOM05D008931 ORTHO05D010933 1.9e-09 65.1 50 66.0
Gohir.A04G039346 Gossypium hirsutum HOM05D008931 ORTHO05D010933 1.9e-09 65.1 50 66.0
Gohir.A05G323764 Gossypium hirsutum HOM05D008931 ORTHO05D010933 1.9e-09 65.1 50 66.0
Gohir.D02G152020 Gossypium hirsutum HOM05D008931 ORTHO05D010933 1.9e-09 65.1 50 66.0
arahy.Tifrunner.gnm1.ann1.V0TL6F Arachis hypogaea HOM05D008931 ORTHO05D010933 2.5e-09 64.7 36 75.0
Sed0023617 Sechium edule HOM05D012647 ORTHO05D014727 4.3e-09 63.9 33 84.8
Sed0023799 Sechium edule HOM05D012647 ORTHO05D014727 4.3e-09 63.9 33 84.8
Gohir.A11G179666 Gossypium hirsutum HOM05D008931 ORTHO05D010933 5.7e-09 63.5 50 64.0
Sed0008100 Sechium edule HOM05D012647 ORTHO05D014727 1.3e-08 62.4 32 84.4
Sed0011710 Sechium edule HOM05D012647 ORTHO05D014727 1.3e-08 62.4 32 84.4
Sed0012014 Sechium edule HOM05D012647 ORTHO05D014727 1.3e-08 62.4 32 84.4
Sed0016577 Sechium edule HOM05D012647 ORTHO05D014727 1.3e-08 62.4 32 84.4
Sed0016952 Sechium edule HOM05D012647 ORTHO05D014727 1.3e-08 62.4 33 81.8
Sed0024822 Sechium edule HOM05D012647 ORTHO05D014727 1.3e-08 62.4 32 84.4
LjContig00319g0003005 Lotus japonicus HOM05D000445 ORTHO05D000314 2.8e-08 61.2 38 73.7
Gohir.A13G086515 Gossypium hirsutum HOM05D008931 ORTHO05D010933 3.7e-08 60.8 40 70.0
Gohir.D02G124533 Gossypium hirsutum HOM05D008931 ORTHO05D010933 3.7e-08 60.8 49 63.3
SHI36399 Sapria himalayana HOM05D008931 ORTHO05D010933 2.6e-06 54.7 30 76.7
SHI36887 Sapria himalayana HOM05D008931 ORTHO05D010933 5.9e-06 53.5 28 78.6


User provided reference genes

Program Settings