Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p2025_0050 Quercus lobata HOM05D003920 ORTHO05D337666 1.1e-226 789.6 409 100.0
QL04p005704 Quercus lobata HOM05D003920 ORTHO05D004877 2.1e-28 131.0 100 78.0
Sp5g00030 Schrenkiella parvula HOM05D003920 ORTHO05D004877 3.7e-12 77.0 247 38.1
QL04p007133 Quercus lobata HOM05D003920 ORTHO05D004877 4.8e-12 76.6 90 70.0
Actinidia31057 Actinidia chinensis HOM05D003920 ORTHO05D004877 9.1e-11 72.4 274 35.0
Haze_03212 Corylus avellana HOM05D003920 ORTHO05D004877 5.0e-09 66.6 94 62.8
Thecc.01G412100 Theobroma cacao HOM05D003920 ORTHO05D004877 4.2e-08 63.5 86 62.8
Gohir.A08G027700 Gossypium hirsutum HOM05D003920 ORTHO05D004877 5.5e-08 63.2 81 66.7
Gohir.D08G038400 Gossypium hirsutum HOM05D003920 ORTHO05D004877 5.5e-08 63.2 81 66.7
QL05p013448 Quercus lobata HOM05D001342 ORTHO05D017698 5.5e-08 63.2 35 85.7
vmacro13655 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 5.5e-08 63.2 37 78.4
Gorai.004G036900 Gossypium raimondii HOM05D003920 ORTHO05D004877 1.6e-07 61.6 79 68.4
Rhsim07G0054700 Rhododendron simsii HOM05D003920 ORTHO05D004877 1.6e-07 61.6 31 90.3
Thhalv10023829m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 2.1e-07 61.2 323 31.9
Lj3g0003225 Lotus japonicus HOM05D003920 ORTHO05D004877 2.1e-07 61.2 108 53.7
Nitab4.5_0000634g0100 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.1e-07 61.2 35 77.1
Cc02_g27780 Coffea canephora HOM05D003920 ORTHO05D017698 2.7e-07 60.8 32 84.4
COL.COLO4_23923 Corchorus olitorius HOM05D003920 ORTHO05D004877 2.7e-07 60.8 30 90.0
MBI04_g13623_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D004877 2.7e-07 60.8 36 77.8
ECA248G0446 Erigeron canadensis HOM05D003920 ORTHO05D004877 6.1e-07 59.7 30 90.0
Eucgr.J01264 Eucalyptus grandis HOM05D003920 ORTHO05D004877 6.1e-07 59.7 30 90.0
Nn2g15431 Nelumbo nucifera HOM05D003920 ORTHO05D004877 6.1e-07 59.7 30 90.0
FvH4_7g00890 Fragaria vesca HOM05D003920 ORTHO05D004877 7.9e-07 59.3 70 71.4
FAN01G3017 Fragaria x ananassa HOM05D003920 ORTHO05D004877 7.9e-07 59.3 70 71.4
FAN03G2194 Fragaria x ananassa HOM05D003920 ORTHO05D004877 7.9e-07 59.3 70 71.4
FAN06G2354 Fragaria x ananassa HOM05D003920 ORTHO05D004877 7.9e-07 59.3 70 71.4
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea HOM05D003920 ORTHO05D004877 1.4e-06 58.5 36 72.2
Thhalv10010518m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 1.4e-06 58.5 115 49.6
PGR044G2195 Punica granatum HOM05D003920 ORTHO05D004877 1.4e-06 58.5 38 71.1
Sc10g0000010 Simmondsia chinensis HOM05D003920 ORTHO05D004877 1.4e-06 58.5 39 66.7
HanXRQChr01g0016141 Helianthus annuus HOM05D003920 ORTHO05D004877 1.8e-06 58.2 30 83.3
Nitab4.5_0004786g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.8e-06 58.2 79 44.3
TAR633G1074 Trochodendron aralioides HOM05D003920 ORTHO05D004877 1.8e-06 58.2 32 81.2
unitig_85.g27216 Utricularia gibba HOM05D003920 ORTHO05D004877 1.8e-06 58.2 30 86.7
Glyma.15G272400 Glycine max HOM05D003920 ORTHO05D004877 2.3e-06 57.8 73 69.9
MD07G1008500 Malus domestica HOM05D003920 ORTHO05D004877 2.3e-06 57.8 107 52.3
Nitab4.5_0001299g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.3e-06 57.8 31 83.9
Potri.009G062600 Populus trichocarpa HOM05D003920 ORTHO05D004877 2.3e-06 57.8 30 86.7
Prupe.2G011700 Prunus persica HOM05D003920 ORTHO05D004877 2.3e-06 57.8 70 71.4
RcHm_v2.0_Chr1g0315781 Rosa chinensis HOM05D003920 ORTHO05D004877 2.3e-06 57.8 70 70.0
Sabra09G0046300 Salix brachista HOM05D003920 ORTHO05D004877 2.3e-06 57.8 30 83.3
SGA_v2.0_scaffold167G38446 Striga asiatica HOM05D003920 ORTHO05D004877 2.3e-06 57.8 30 86.7
Actinidia36714 Actinidia chinensis HOM05D003920 ORTHO05D004877 3.0e-06 57.4 235 28.5
MSTRG.5016 Avicennia marina HOM05D003920 ORTHO05D004877 3.0e-06 57.4 31 80.6
Peaxi162Scf00407g00639 Petunia axillaris HOM05D003920 ORTHO05D004877 3.0e-06 57.4 68 45.6
TWI73G0359 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 3.0e-06 57.4 30 86.7
CAN.G709.1 Capsicum annuum HOM05D003920 ORTHO05D004877 3.9e-06 57.0 30 86.7
Medtr3g028190 Medicago truncatula HOM05D003920 ORTHO05D004877 3.9e-06 57.0 90 57.8
PSO339G5616 Papaver somniferum HOM05D003920 ORTHO05D004877 3.9e-06 57.0 30 83.3
PSO384G3532 Papaver somniferum HOM05D003920 ORTHO05D004877 3.9e-06 57.0 30 83.3
Potri.001G268200 Populus trichocarpa HOM05D003920 ORTHO05D004877 3.9e-06 57.0 29 86.2
Sabra16G0164300 Salix brachista HOM05D003920 ORTHO05D004877 3.9e-06 57.0 29 86.2
Aa31LG10G17420 Aethionema arabicum HOM05D003920 ORTHO05D004877 5.1e-06 56.6 38 71.1
AL5G46410 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 5.1e-06 56.6 65 72.3
BolC8t48153H Brassica oleracea HOM05D003920 ORTHO05D017698 5.1e-06 56.6 33 75.8
Dinv43454 Davidia involucrata HOM05D003920 ORTHO05D004877 5.1e-06 56.6 30 83.3
MD02G1313900 Malus domestica HOM05D003920 ORTHO05D004877 5.1e-06 56.6 69 71.0
Peaxi162Scf00428g00618 Petunia axillaris HOM05D003920 ORTHO05D004877 5.1e-06 56.6 30 86.7
TPR.G12140 Trifolium pratense HOM05D003920 ORTHO05D004877 5.1e-06 56.6 34 70.6
GSVIVG01032073001 Vitis vinifera HOM05D003920 ORTHO05D004877 5.1e-06 56.6 30 83.3
Atru.chr11.2647 Acer truncatum HOM05D003920 ORTHO05D004877 6.7e-06 56.2 91 58.2
Aqoxy2G00138 Aquilegia oxysepala HOM05D003920 ORTHO05D004877 6.7e-06 56.2 30 83.3
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea HOM05D003920 ORTHO05D004877 6.7e-06 56.2 30 83.3
CSS0030964 Camellia sinensis var. sinensis HOM05D003920 ORTHO05D004877 6.7e-06 56.2 117 48.7
Lj9C630T11 Lonicera japonica HOM05D003920 ORTHO05D004877 6.7e-06 56.2 30 83.3
Sp1g00020 Schrenkiella parvula HOM05D003920 ORTHO05D004877 6.7e-06 56.2 38 71.1
THA.LOC104827426 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 6.7e-06 56.2 30 86.7
HPP92_005768 Vanilla planifolia HOM05D003920 ORTHO05D004877 6.7e-06 56.2 30 83.3
arahy.Tifrunner.gnm1.ann1.RPY2B8 Arachis hypogaea HOM05D004014 ORTHO05D031593 8.8e-06 55.8 34 73.5
BraA08t34788Z Brassica rapa HOM05D003920 ORTHO05D017698 8.8e-06 55.8 40 67.5
Lalb_Chr01g0015291 Lupinus albus HOM05D003920 ORTHO05D004877 8.8e-06 55.8 30 83.3
Nitab4.5_0011837g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 8.8e-06 55.8 30 83.3
Oeu039134.1 Olea europaea HOM05D003920 ORTHO05D004877 8.8e-06 55.8 30 83.3
Solyc10g038000.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 8.8e-06 55.8 30 83.3


User provided reference genes

Program Settings