Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p2023_0115 Quercus lobata HOM05D000461 ORTHO05D009768 7.6e-264 913.3 468 100.0
QL08p018730 Quercus lobata HOM05D000461 ORTHO05D009768 6.9e-257 890.2 517 90.5
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 1.3e-239 832.8 462 91.8
Potri.011G127400 Populus trichocarpa HOM05D000461 ORTHO05D009768 2.6e-227 792.0 469 83.8
Prupe.4G188800 Prunus persica HOM05D000461 ORTHO05D009768 3.3e-227 791.6 467 84.2
RcHm_v2.0_Chr5g0035161 Rosa chinensis HOM05D000461 ORTHO05D009768 2.4e-225 785.4 466 83.5
Dinv08334 Davidia involucrata HOM05D000461 ORTHO05D009768 5.3e-225 784.3 462 83.8
TAR626G0736 Trochodendron aralioides HOM05D000461 ORTHO05D009768 9.1e-225 783.5 466 84.1
MD03G1220100 Malus domestica HOM05D000461 ORTHO05D009768 1.2e-224 783.1 466 82.8
Haze_09517 Corylus avellana HOM05D000461 ORTHO05D009768 2.0e-224 782.3 463 87.3
Gorai.002G075600 Gossypium raimondii HOM05D000461 ORTHO05D009768 5.9e-224 780.8 466 83.5
Hma1.2p1_1003F.1_g246700 Hydrangea macrophylla HOM05D000461 ORTHO05D009768 1.3e-223 779.6 466 82.8
Gohir.D01G055500 Gossypium hirsutum HOM05D000461 ORTHO05D009768 8.5e-223 776.9 466 82.8
Manes.03G115700 Manihot esculenta HOM05D000461 ORTHO05D009768 8.5e-223 776.9 466 83.0
Nn1g03933 Nelumbo nucifera HOM05D000461 ORTHO05D009768 2.5e-222 775.4 466 84.8
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 2.1e-221 772.3 464 82.1
Lalb_Chr19g0134451 Lupinus albus HOM05D000461 ORTHO05D009768 2.1e-221 772.3 463 82.5
Lj3g0022224 Lotus japonicus HOM05D000461 ORTHO05D009768 1.4e-220 769.6 460 82.4
Medtr8g093250 Medicago truncatula HOM05D000461 ORTHO05D009768 1.4e-220 769.6 466 82.0
TPR.G37406 Trifolium pratense HOM05D000461 ORTHO05D009768 4.0e-220 768.1 466 81.5
FvH4_3g20850 Fragaria vesca HOM05D000461 ORTHO05D009768 8.8e-220 766.9 467 82.7
arahy.Tifrunner.gnm1.ann1.QNW6LA Arachis hypogaea HOM05D000461 ORTHO05D009768 7.5e-219 763.8 487 79.9
TWI39G0712 Tripterygium wilfordii HOM05D000461 ORTHO05D009768 7.5e-219 763.8 466 81.8
Ca_17659_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009768 1.3e-218 763.1 466 81.8
Rhsim04G0018400 Rhododendron simsii HOM05D000461 ORTHO05D009768 3.7e-218 761.5 491 78.8
arahy.Tifrunner.gnm1.ann1.58XN2N Arachis hypogaea HOM05D000461 ORTHO05D009768 4.8e-218 761.1 473 81.0
Glyma.12G147900 Glycine max HOM05D000461 ORTHO05D009768 4.1e-217 758.1 409 90.0
Phvul.011G154500 Phaseolus vulgaris HOM05D000461 ORTHO05D009768 4.1e-217 758.1 409 89.2
Atru.chr2.2833 Acer truncatum HOM05D000461 ORTHO05D009768 1.6e-216 756.1 403 90.6
Solyc07g063510.3 Solanum lycopersicum HOM05D000461 ORTHO05D009768 1.6e-216 756.1 466 80.5
CANSAT11G0348 Cannabis sativa HOM05D000461 ORTHO05D009768 7.7e-216 753.8 492 78.0
VMungo1127G1042 Vigna mungo HOM05D000461 ORTHO05D009768 2.9e-215 751.9 409 88.8
Sopen07g031690 Solanum pennellii HOM05D000461 ORTHO05D009768 3.8e-215 751.5 466 80.3
MBI02_g10553_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009768 8.6e-215 750.4 482 77.8
Peaxi162Scf01111g00017 Petunia axillaris HOM05D000461 ORTHO05D009768 5.5e-214 747.7 466 79.2
vmacro09551 Vaccinium macrocarpon HOM05D000461 ORTHO05D009768 1.2e-213 746.5 514 76.1
PGSC0003DMG400019289 Solanum tuberosum HOM05D000461 ORTHO05D009768 2.1e-213 745.7 466 79.6
Cpa.g.sc80.105 Carica papaya HOM05D000461 ORTHO05D009768 2.8e-213 745.3 404 89.6
HanXRQChr11g0330921 Helianthus annuus HOM05D000461 ORTHO05D009768 6.1e-213 744.2 407 88.2
ECA236G2753 Erigeron canadensis HOM05D000461 ORTHO05D009768 8.0e-213 743.8 407 88.5
Duzib213G0388 Durio zibethinus HOM05D000461 ORTHO05D009768 3.0e-212 741.9 447 81.7
Lsat_1_v5_gn_7_106360 Lactuca sativa HOM05D000461 ORTHO05D009768 8.9e-212 740.3 407 88.2
Sed0023337 Sechium edule HOM05D000461 ORTHO05D009768 1.2e-211 740.0 466 79.2
Eucgr.H00422 Eucalyptus grandis HOM05D000461 ORTHO05D009768 1.5e-211 739.6 406 88.9
Cc05_g12580 Coffea canephora HOM05D000461 ORTHO05D009768 2.0e-211 739.2 408 87.0
CsaV3_3G044400 Cucumis sativus L. HOM05D000461 ORTHO05D009768 2.0e-211 739.2 466 79.0
SGA_v2.0_scaffold34G13718 Striga asiatica HOM05D000461 ORTHO05D009768 2.8e-210 735.3 465 78.3
MSTRG.6849 Avicennia marina HOM05D000461 ORTHO05D009768 3.7e-210 734.9 409 86.8
CAN.G162.98 Capsicum annuum HOM05D000461 ORTHO05D009768 5.4e-209 731.1 477 77.6
Thecc.07G073000 Theobroma cacao HOM05D000461 ORTHO05D009768 5.4e-209 731.1 466 79.0
Nitab4.5_0002565g0060 Nicotiana tabacum HOM05D000461 ORTHO05D009768 2.3e-207 725.7 451 80.3
Migut.M00870 Erythranthe guttata HOM05D000461 ORTHO05D009768 5.0e-207 724.5 465 77.0
Ah.04g164990 Amaranthus hybridus HOM05D000461 ORTHO05D009768 2.5e-206 722.2 467 77.9
Sc03g0009640 Simmondsia chinensis HOM05D000461 ORTHO05D009768 5.6e-206 721.1 469 76.8
CiPaw.11G175300 Carya illinoinensis HOM05D000461 ORTHO05D009768 8.3e-202 707.2 367 94.3
AUR62015610 Chenopodium quinoa HOM05D000461 ORTHO05D009768 3.0e-199 698.7 511 71.4
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 3.9e-199 698.4 398 87.2
HPP92_016586 Vanilla planifolia HOM05D000461 ORTHO05D009768 1.1e-198 696.8 408 82.1
Lj1C852T3 Lonicera japonica HOM05D000461 ORTHO05D009768 1.8e-196 689.5 468 76.5
SEGI_18811 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 9.2e-193 677.2 409 78.2
ClCG11G018420 Citrullus lanatus HOM05D000461 ORTHO05D009768 4.6e-192 674.9 466 73.8
EL10Ac4g08080 Beta vulgaris HOM05D000461 ORTHO05D009768 6.0e-192 674.5 391 84.7
SalBow8G3533 Salvia bowleyana HOM05D000461 ORTHO05D009768 7.8e-192 674.1 387 84.5
AUR62029323 Chenopodium quinoa HOM05D000461 ORTHO05D009768 9.9e-187 657.1 486 71.2
Zm00001eb069190 Zea mays HOM05D000461 ORTHO05D009768 1.7e-186 656.4 410 77.3
Hund27427 Selenicereus undatus HOM05D000461 ORTHO05D009768 4.6e-184 648.3 442 75.1
unitig_747.g21565 Utricularia gibba HOM05D000461 ORTHO05D009768 4.6e-184 648.3 409 77.3
Nitab4.5_0000297g0070 Nicotiana tabacum HOM05D000461 ORTHO05D009768 1.7e-183 646.4 406 79.8
MELO3C018201.2 Cucumis melo HOM05D000461 ORTHO05D009768 7.3e-182 641.0 470 71.7
Mapoly0032s0012 Marchantia polymorpha HOM05D000461 ORTHO05D009768 8.9e-180 634.0 410 73.7
Pp3c15_6180 Physcomitrium patens HOM05D000461 ORTHO05D009768 1.0e-175 620.5 407 72.2
AagrBONN_evm.TU.Sc2ySwM_344.1693 Anthoceros agrestis HOM05D000461 ORTHO05D009768 3.5e-168 595.5 436 66.3
SMO137G0173 Selaginella moellendorffii HOM05D000461 ORTHO05D009768 1.3e-167 593.6 409 69.7
Psat7g047120 Pisum sativum HOM05D000461 ORTHO05D009768 3.0e-167 592.4 380 78.7
Oeu019359.1 Olea europaea HOM05D000461 ORTHO05D009768 7.9e-160 567.8 377 76.9
CBR_g31136 Chara braunii HOM05D000461 ORTHO05D009768 6.7e-159 564.7 408 65.4
CDE12G0333 Ceratophyllum demersum HOM05D000461 ORTHO05D009768 1.4e-156 557.0 362 75.4
Cre06.g301650 Chlamydomonas reinhardtii HOM05D000461 ORTHO05D009768 3.8e-130 469.2 394 58.6
PRCOL_00003908 Prasinoderma coloniale HOM05D000461 ORTHO05D009768 1.2e-123 447.6 386 59.8
GSVIVG01014420001 Vitis vinifera HOM05D000461 ORTHO05D009768 7.2e-113 411.8 228 86.4
Glyma.06G253602 Glycine max HOM05D000461 ORTHO05D009768 3.5e-107 392.9 243 79.4
Gohir.A01G068201 Gossypium hirsutum HOM05D000461 ORTHO05D009768 2.2e-93 347.1 250 73.2
Zm00001eb291490 Zea mays HOM05D000461 ORTHO05D009768 2.9e-77 293.5 183 77.6
Zm00001eb057620 Zea mays HOM05D000461 ORTHO05D009768 8.3e-77 292.0 183 77.0
Zm00001eb222780 Zea mays HOM05D000461 ORTHO05D009768 8.3e-77 292.0 183 77.0
Zm00001eb308580 Zea mays HOM05D000461 ORTHO05D009768 8.3e-77 292.0 183 77.0
Gohir.A01G068251 Gossypium hirsutum HOM05D000461 ORTHO05D009768 1.4e-68 264.6 140 92.9
ATR0274G001 Amborella trichopoda HOM05D000461 ORTHO05D009768 9.2e-68 261.9 146 86.3
SEGI_34047 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 1.8e-55 221.1 220 55.5
Os04g0636300 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009768 1.6e-48 198.0 138 71.7
GSVIVG01014419001 Vitis vinifera HOM05D000461 ORTHO05D009768 1.7e-37 161.4 94 87.2
Lalb_Chr19g0134431 Lupinus albus HOM05D000461 ORTHO05D038317 2.2e-16 91.3 98 53.1
arahy.Tifrunner.gnm1.ann1.AV15VC Arachis hypogaea HOM05D000296 ORTHO05D000175 2.0e-14 84.7 44 93.2
ATR0693G093 Amborella trichopoda HOM05D000461 ORTHO05D038317 5.5e-12 76.6 104 46.2
SEGI_16587 Sequoiadendron giganteum HOM05D000415 ORTHO05D385778 2.0e-09 68.2 89 41.6
Nn1g06725 Nelumbo nucifera HOM05D000461 ORTHO05D009768 2.0e-06 58.2 43 69.8


User provided reference genes

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