Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p2023_0080 Quercus lobata HOM05D008538 ORTHO05D010142 8.8e-65 250.4 148 100.0
QL08p018693 Quercus lobata HOM05D008538 ORTHO05D010142 7.0e-62 240.7 149 94.6
Haze_09520 Corylus avellana HOM05D008538 ORTHO05D010142 4.4e-40 168.3 149 64.4
Cfa020514 Carpinus fangiana HOM05D008538 ORTHO05D010142 7.8e-37 157.5 151 62.3
QL08p018608 Quercus lobata HOM05D008538 ORTHO05D010142 1.1e-35 153.7 278 43.9
QL08p018385 Quercus lobata HOM05D000101 ORTHO05D000089 2.2e-23 112.8 87 80.5
FAN21G1320 Fragaria x ananassa HOM05D008538 ORTHO05D010142 1.6e-18 96.7 139 43.9
Prupe.4G189200 Prunus persica HOM05D008538 ORTHO05D010142 4.7e-18 95.1 145 42.8
MD03G1219700 Malus domestica HOM05D008538 ORTHO05D010142 6.2e-18 94.7 139 46.0
FAN25G2351 Fragaria x ananassa HOM05D001272 ORTHO05D001843 8.1e-18 94.4 143 42.7
Thecc.07G072500 Theobroma cacao HOM05D019219 ORTHO05D010142 1.8e-17 93.2 148 43.2
CSS0013852 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 2.3e-17 92.8 146 42.5
CSS0046110 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 2.3e-17 92.8 146 42.5
FvH4_3g20870 Fragaria vesca HOM05D008538 ORTHO05D010142 2.3e-17 92.8 139 43.2
FAN11G3526 Fragaria x ananassa HOM05D008538 ORTHO05D010142 2.3e-17 92.8 139 43.2
ClCG10G006550 Citrullus lanatus HOM05D008538 ORTHO05D010142 3.1e-17 92.4 148 43.2
Hma1.2p1_1003F.1_g246760 Hydrangea macrophylla HOM05D008538 ORTHO05D010142 5.2e-17 91.7 148 41.9
MELO3C016550.2 Cucumis melo HOM05D008538 ORTHO05D010142 6.8e-17 91.3 142 43.7
Actinidia18751 Actinidia chinensis HOM05D008538 ORTHO05D010142 8.9e-17 90.9 146 41.8
Dinv08337 Davidia involucrata HOM05D008538 ORTHO05D010142 4.4e-16 88.6 148 40.5
Manes.03G116200 Manihot esculenta HOM05D008538 ORTHO05D010142 2.9e-15 85.9 148 39.2
CsaV3_3G006000 Cucumis sativus L. HOM05D008538 ORTHO05D010142 4.9e-15 85.1 158 44.3
Atru.chr2.2829 Acer truncatum HOM05D008538 ORTHO05D010142 6.4e-15 84.7 141 44.0
Cc05_g12630 Coffea canephora HOM05D008538 ORTHO05D010142 1.9e-14 83.2 146 40.4
Manes.15G083500 Manihot esculenta HOM05D008538 ORTHO05D010142 4.1e-14 82.0 149 40.9
Ciclev10010245m.g Citrus clementina HOM05D008538 ORTHO05D010142 7.1e-14 81.3 150 39.3
Cpa.g.sc80.108 Carica papaya HOM05D008538 ORTHO05D010142 1.2e-13 80.5 116 43.1
Sed0026392 Sechium edule HOM05D008538 ORTHO05D010142 2.7e-13 79.3 152 39.5
Lsat_1_v5_gn_5_6940 Lactuca sativa HOM05D008538 ORTHO05D010142 1.1e-11 73.9 134 38.8
TWI39G0570 Tripterygium wilfordii HOM05D008538 ORTHO05D010142 5.6e-11 71.6 127 37.8
Eucgr.D01016 Eucalyptus grandis HOM05D008538 ORTHO05D010142 6.2e-10 68.2 149 35.6
ECA246G3043 Erigeron canadensis HOM05D008538 ORTHO05D010142 1.5e-08 63.5 128 38.3
Nitab4.5_0000207g0250 Nicotiana tabacum HOM05D008538 ORTHO05D010142 5.8e-08 61.6 152 37.5
VMungo1127G1310 Vigna mungo HOM05D011644 ORTHO05D010142 1.3e-07 60.5 134 36.6
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 1.7e-07 60.1 84 32.1
Phvul.011G154700 Phaseolus vulgaris HOM05D011644 ORTHO05D010142 2.2e-07 59.7 130 36.2
Glyma.06G253800 Glycine max HOM05D011644 ORTHO05D010142 6.4e-07 58.2 134 35.8
PGSC0003DMG400025004 Solanum tuberosum HOM05D008538 ORTHO05D010142 1.4e-06 57.0 130 38.5
Duzib268G1845 Durio zibethinus HOM05D019219 ORTHO05D010142 1.9e-06 56.6 149 31.5
Glyma.12G147600 Glycine max HOM05D011644 ORTHO05D010142 2.4e-06 56.2 131 35.9
Gohir.A11G283900 Gossypium hirsutum HOM05D019219 ORTHO05D010142 4.2e-06 55.5 137 33.6
Lalb_Chr19g0134471 Lupinus albus HOM05D011644 ORTHO05D010142 7.1e-06 54.7 128 34.4
Rhsim04G0018000 Rhododendron simsii HOM05D008538 ORTHO05D010142 7.1e-06 54.7 48 56.2


User provided reference genes

Program Settings