Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p2023_0047 Quercus lobata HOM05D010293 ORTHO05D009871 6.4e-91 337.4 172 100.0
QL08p018353 Quercus lobata HOM05D010293 ORTHO05D009871 4.9e-83 311.2 196 85.2
QL08p018585 Quercus lobata HOM05D010293 ORTHO05D009871 1.4e-69 266.5 286 56.3
QL08p018333 Quercus lobata HOM05D010293 ORTHO05D009871 7.9e-41 171.0 225 50.7
QL08p018535 Quercus lobata HOM05D010293 ORTHO05D009871 2.3e-40 169.5 108 83.3
FvH4_3g20890 Fragaria vesca HOM05D010293 ORTHO05D009871 9.3e-26 120.9 233 37.3
FAN11G0092 Fragaria x ananassa HOM05D010293 ORTHO05D009871 9.3e-26 120.9 233 37.3
Haze_09525 Corylus avellana HOM05D008666 ORTHO05D009871 1.5e-23 113.6 203 43.8
Actinidia18749 Actinidia chinensis HOM05D008666 ORTHO05D009871 3.3e-23 112.5 192 38.0
Ciclev10009573m.g Citrus clementina HOM05D008666 ORTHO05D009871 3.3e-23 112.5 194 38.7
QL93p2023_0014 Quercus lobata HOM05D010293 ORTHO05D009871 4.3e-23 112.1 64 87.5
FAN21G2602 Fragaria x ananassa HOM05D001272 ORTHO05D001843 7.4e-23 111.3 225 36.0
Dinv08338 Davidia involucrata HOM05D008666 ORTHO05D009871 4.1e-21 105.5 192 38.0
CiPaw.11G176000 Carya illinoinensis HOM05D008666 ORTHO05D009871 2.6e-20 102.8 159 43.4
MD03G1219600 Malus domestica HOM05D010293 ORTHO05D009871 2.6e-20 102.8 203 35.0
Hma1.2p1_1003F.1_g246770 Hydrangea macrophylla HOM05D008666 ORTHO05D009871 1.2e-17 94.0 193 35.8
Cc10_g08880 Coffea canephora HOM05D008666 ORTHO05D009871 3.0e-16 89.4 171 34.5
Cc05_g12640 Coffea canephora HOM05D008666 ORTHO05D009871 6.7e-16 88.2 197 31.0
Migut.H01908 Erythranthe guttata HOM05D008666 ORTHO05D009871 2.2e-14 83.2 203 31.5
Sopen12g006880 Solanum pennellii HOM05D008666 ORTHO05D009871 2.2e-14 83.2 197 32.0
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 2.8e-14 82.8 206 33.5
Oeu008032.1 Olea europaea HOM05D008666 ORTHO05D009871 4.8e-14 82.0 189 32.3
Solyc12g013530.2 Solanum lycopersicum HOM05D008666 ORTHO05D009871 1.1e-13 80.9 196 32.7
Prupe.4G189400 Prunus persica HOM05D010293 ORTHO05D009871 1.0e-11 74.3 121 38.8
THA.LOC104799910 Tarenaya hassleriana HOM05D008666 ORTHO05D009871 1.7e-11 73.6 205 31.2
Ah.10g037450 Amaranthus hybridus HOM05D014664 ORTHO05D009871 3.8e-11 72.4 185 24.9
Peaxi162Scf00000g00503 Petunia axillaris HOM05D008666 ORTHO05D009871 3.8e-11 72.4 183 35.0
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 6.5e-11 71.6 199 31.7
Nitab4.5_0000639g0010 Nicotiana tabacum HOM05D008666 ORTHO05D009871 8.5e-11 71.2 197 33.5
Thecc.07G071900 Theobroma cacao HOM05D008666 ORTHO05D009871 8.5e-11 71.2 169 36.7
MSTRG.14377 Avicennia marina HOM05D008666 ORTHO05D009871 1.4e-10 70.5 170 32.4
EL10Ac5g12049 Beta vulgaris HOM05D014664 ORTHO05D009871 2.5e-10 69.7 184 26.6
Sc11g0008030 Simmondsia chinensis HOM05D014664 ORTHO05D009871 5.5e-10 68.6 197 29.9
CSS0038280 Camellia sinensis var. sinensis HOM05D010293 ORTHO05D009871 9.4e-10 67.8 174 33.3
Potri.008G084200 Populus trichocarpa HOM05D008666 ORTHO05D009871 9.4e-10 67.8 142 31.7
AUR62026950 Chenopodium quinoa HOM05D014664 ORTHO05D009871 1.2e-09 67.4 194 24.2
Prupe.4G189500 Prunus persica HOM05D010293 ORTHO05D009871 2.7e-09 66.2 139 31.7
CANSAT11G1747 Cannabis sativa HOM05D008666 ORTHO05D009871 3.6e-09 65.9 67 47.8
AUR62043278 Chenopodium quinoa HOM05D014664 ORTHO05D009871 6.1e-09 65.1 190 26.3
RcHm_v2.0_Chr5g0035311 Rosa chinensis HOM05D010293 ORTHO05D009871 6.1e-09 65.1 132 34.8
Rhsim04G0017800 Rhododendron simsii HOM05D008666 ORTHO05D009871 3.0e-08 62.8 215 28.8
COL.COLO4_09475 Corchorus olitorius HOM05D008666 ORTHO05D009871 6.7e-08 61.6 182 34.1
MBI18_g11119_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 1.1e-07 60.8 67 46.3
FAN25G3202 Fragaria x ananassa HOM05D010293 ORTHO05D009871 7.4e-07 58.2 104 37.5
Oeu030433.2 Olea europaea HOM05D008666 ORTHO05D009871 9.7e-07 57.8 68 42.6
Hund16095 Selenicereus undatus HOM05D014664 ORTHO05D009871 1.3e-06 57.4 129 30.2
vmacro09555 Vaccinium macrocarpon HOM05D008666 ORTHO05D009871 1.3e-06 57.4 173 31.8
FAN25G1744 Fragaria x ananassa HOM05D010293 ORTHO05D009871 1.7e-06 57.0 90 41.1
MBI18_g11116_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 4.8e-06 55.5 68 47.1
PGSC0003DMG400008566 Solanum tuberosum HOM05D008666 ORTHO05D009871 8.2e-06 54.7 190 26.8


User provided reference genes

Program Settings