Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p2023_0014 Quercus lobata HOM05D010293 ORTHO05D009871 7.0e-56 220.3 106 100.0
QL08p018353 Quercus lobata HOM05D010293 ORTHO05D009871 5.7e-34 147.5 87 83.9
QL08p018333 Quercus lobata HOM05D010293 ORTHO05D009871 3.7e-33 144.8 86 84.9
QL93p2023_0047 Quercus lobata HOM05D010293 ORTHO05D009871 1.6e-23 112.8 64 87.5
CiPaw.11G176000 Carya illinoinensis HOM05D008666 ORTHO05D009871 1.1e-16 90.1 89 56.2
QL08p018585 Quercus lobata HOM05D010293 ORTHO05D009871 1.4e-16 89.7 51 84.3
Actinidia18749 Actinidia chinensis HOM05D008666 ORTHO05D009871 3.0e-14 82.0 91 45.1
Dinv08338 Davidia involucrata HOM05D008666 ORTHO05D009871 3.9e-14 81.6 91 46.2
Hma1.2p1_1003F.1_g246770 Hydrangea macrophylla HOM05D008666 ORTHO05D009871 3.9e-14 81.6 91 47.3
Haze_09525 Corylus avellana HOM05D008666 ORTHO05D009871 2.5e-13 79.0 88 47.7
Prupe.4G189400 Prunus persica HOM05D010293 ORTHO05D009871 4.3e-13 78.2 89 46.1
Migut.H01908 Erythranthe guttata HOM05D008666 ORTHO05D009871 5.6e-13 77.8 92 45.7
Manes.01G178300 Manihot esculenta HOM05D008666 ORTHO05D009871 4.7e-12 74.7 87 42.5
Oeu030433.2 Olea europaea HOM05D008666 ORTHO05D009871 1.4e-11 73.2 93 41.9
MSTRG.14377 Avicennia marina HOM05D008666 ORTHO05D009871 1.8e-11 72.8 87 42.5
MD03G1219600 Malus domestica HOM05D010293 ORTHO05D009871 2.3e-11 72.4 89 43.8
THA.LOC104799910 Tarenaya hassleriana HOM05D008666 ORTHO05D009871 3.1e-11 72.0 98 43.9
FAN21G2602 Fragaria x ananassa HOM05D001272 ORTHO05D001843 8.9e-11 70.5 107 40.2
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 1.2e-10 70.1 88 46.6
MBI18_g11116_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 1.5e-10 69.7 94 43.6
Oeu008032.1 Olea europaea HOM05D008666 ORTHO05D009871 2.6e-10 68.9 91 40.7
Potri.008G084200 Populus trichocarpa HOM05D008666 ORTHO05D009871 2.6e-10 68.9 91 41.8
FvH4_3g20890 Fragaria vesca HOM05D010293 ORTHO05D009871 4.4e-10 68.2 107 40.2
FAN11G0092 Fragaria x ananassa HOM05D010293 ORTHO05D009871 4.4e-10 68.2 107 40.2
Haze_09524 Corylus avellana HOM05D010293 ORTHO05D009871 5.8e-10 67.8 87 40.2
CANSAT11G1747 Cannabis sativa HOM05D008666 ORTHO05D009871 2.2e-09 65.9 91 41.8
Ciclev10009573m.g Citrus clementina HOM05D008666 ORTHO05D009871 8.4e-09 63.9 94 41.5
Cc05_g12640 Coffea canephora HOM05D008666 ORTHO05D009871 8.4e-09 63.9 91 40.7
Solyc12g013530.2 Solanum lycopersicum HOM05D008666 ORTHO05D009871 1.1e-08 63.5 91 42.9
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 1.1e-08 63.5 88 44.3
TAR599G0004 Trochodendron aralioides HOM05D008666 ORTHO05D009871 1.1e-08 63.5 96 36.5
HanXRQChr03g0075931 Helianthus annuus HOM05D008666 ORTHO05D009871 3.2e-08 62.0 91 40.7
MBI18_g11119_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 3.2e-08 62.0 75 44.0
Prupe.4G189500 Prunus persica HOM05D010293 ORTHO05D009871 5.4e-08 61.2 99 38.4
Nitab4.5_0000662g0020 Nicotiana tabacum HOM05D008666 ORTHO05D009871 7.1e-08 60.8 92 41.3
Sopen12g006880 Solanum pennellii HOM05D008666 ORTHO05D009871 1.2e-07 60.1 91 41.8
Thecc.07G071900 Theobroma cacao HOM05D008666 ORTHO05D009871 1.6e-07 59.7 93 41.9
Cc10_g08880 Coffea canephora HOM05D008666 ORTHO05D009871 1.0e-06 57.0 100 37.0
Nitab4.5_0005141g0060 Nicotiana tabacum HOM05D008666 ORTHO05D009871 1.3e-06 56.6 98 35.7
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 3.9e-06 55.1 56 48.2
Nitab4.5_0000639g0010 Nicotiana tabacum HOM05D008666 ORTHO05D009871 8.6e-06 53.9 85 38.8
Hund16095 Selenicereus undatus HOM05D014664 ORTHO05D009871 8.6e-06 53.9 79 36.7


User provided reference genes

Program Settings