Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p2019_0012 Quercus lobata HOM05D001607 ORTHO05D001893 1.0e-34 149.4 71 100.0
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 1.4e-23 112.5 58 89.7
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 1.8e-23 112.1 58 93.1
Dinv28425 Davidia involucrata HOM05D001607 ORTHO05D001893 4.0e-23 110.9 58 89.7
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 5.2e-23 110.5 58 87.9
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 6.8e-23 110.2 58 87.9
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 8.9e-23 109.8 58 87.9
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 1.2e-22 109.4 58 89.7
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 1.5e-22 109.0 58 87.9
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 1.5e-22 109.0 58 89.7
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 2.0e-22 108.6 58 91.4
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 2.0e-22 108.6 58 87.9
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 2.6e-22 108.2 58 86.2
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 2.6e-22 108.2 58 86.2
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 2.6e-22 108.2 58 89.7
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 3.4e-22 107.8 67 74.6
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 3.4e-22 107.8 58 86.2
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 4.4e-22 107.5 58 84.5
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 7.5e-22 106.7 58 84.5
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 7.5e-22 106.7 62 80.6
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 7.5e-22 106.7 62 80.6
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 7.5e-22 106.7 58 84.5
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 9.8e-22 106.3 62 80.6
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 9.8e-22 106.3 58 81.0
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 9.8e-22 106.3 58 86.2
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 9.8e-22 106.3 58 87.9
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 1.3e-21 105.9 58 86.2
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 2.2e-21 105.1 58 86.2
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 2.9e-21 104.8 58 82.8
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 2.9e-21 104.8 58 82.8
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 2.9e-21 104.8 58 82.8
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.9e-21 104.8 61 82.0
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 2.9e-21 104.8 67 74.6
unitig_46.g18794 Utricularia gibba HOM05D001607 ORTHO05D001893 2.9e-21 104.8 58 82.8
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 4.9e-21 104.0 58 84.5
Gorai.004G118300 Gossypium raimondii HOM05D001607 ORTHO05D001893 4.9e-21 104.0 58 84.5
Peaxi162Scf00444g00717 Petunia axillaris HOM05D001607 ORTHO05D001893 8.3e-21 103.2 58 82.8
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 1.1e-20 102.8 62 74.2
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 1.1e-20 102.8 58 82.8
CiPaw.03G107800 Carya illinoinensis HOM05D001607 ORTHO05D001893 1.4e-20 102.4 58 84.5
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.4e-20 102.4 61 78.7
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.4e-20 102.4 61 78.7
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 1.9e-20 102.1 67 74.6
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 1.9e-20 102.1 58 81.0
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 2.4e-20 101.7 58 82.8
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.4e-20 101.7 61 80.3
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.4e-20 101.7 61 80.3
Nitab4.5_0001842g0120 Nicotiana tabacum HOM05D001607 ORTHO05D001893 2.4e-20 101.7 58 81.0
Nitab4.5_0005845g0050 Nicotiana tabacum HOM05D001607 ORTHO05D001893 2.4e-20 101.7 58 81.0
Sopen03g004440 Solanum pennellii HOM05D001607 ORTHO05D001893 2.4e-20 101.7 58 82.8
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 3.2e-20 101.3 67 71.6
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 4.1e-20 100.9 58 81.0
THA.LOC104824860 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 4.1e-20 100.9 58 84.5
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 5.4e-20 100.5 58 79.3
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 5.4e-20 100.5 67 74.6
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 7.0e-20 100.1 61 78.7
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 7.0e-20 100.1 61 78.7
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 7.0e-20 100.1 61 78.7
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 7.0e-20 100.1 61 78.7
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 7.0e-20 100.1 58 79.3
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 9.2e-20 99.8 57 82.5
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 9.2e-20 99.8 58 79.3
Lsat_1_v5_gn_8_8420 Lactuca sativa HOM05D001607 ORTHO05D001893 9.2e-20 99.8 64 73.4
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 1.2e-19 99.4 59 74.6
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 1.2e-19 99.4 57 82.5
vmacro06666 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 1.2e-19 99.4 58 79.3
BcaNung04147 Brassica carinata HOM05D001607 ORTHO05D001893 1.6e-19 99.0 57 82.5
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 1.6e-19 99.0 57 82.5
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 1.6e-19 99.0 58 79.3
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 1.6e-19 99.0 58 77.6
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 1.6e-19 99.0 58 81.0
BcaC09g51300 Brassica carinata HOM05D001607 ORTHO05D001893 2.1e-19 98.6 57 80.7
C01p14680 Brassica napus HOM05D001607 ORTHO05D001893 2.1e-19 98.6 57 80.7
BolC1t01419H Brassica oleracea HOM05D001607 ORTHO05D001893 2.1e-19 98.6 57 80.7
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 2.1e-19 98.6 61 77.0
Eucgr.A02780 Eucalyptus grandis HOM05D001607 ORTHO05D001893 2.1e-19 98.6 61 77.0
HanXRQChr10g0304171 Helianthus annuus HOM05D001607 ORTHO05D001893 2.1e-19 98.6 64 71.9
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 2.1e-19 98.6 58 77.6
THA.LOC104824854 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 2.1e-19 98.6 58 82.8
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 2.7e-19 98.2 57 80.7
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 2.7e-19 98.2 58 77.6
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 3.5e-19 97.8 58 75.9
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 3.5e-19 97.8 58 75.9
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 3.5e-19 97.8 58 82.8
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 3.5e-19 97.8 58 75.9
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 4.6e-19 97.4 57 80.7
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 4.6e-19 97.4 57 80.7
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 4.6e-19 97.4 57 80.7
BraA03t14327Z Brassica rapa HOM05D001607 ORTHO05D001893 4.6e-19 97.4 57 80.7
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 4.6e-19 97.4 58 79.3
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 4.6e-19 97.4 58 79.3
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 4.6e-19 97.4 58 79.3
Psat0s3405g0080 Pisum sativum HOM05D001607 ORTHO05D001893 4.6e-19 97.4 58 75.9
ECA233G5223 Erigeron canadensis HOM05D001607 ORTHO05D001893 6.0e-19 97.1 66 68.2
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 6.0e-19 97.1 58 75.9
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 6.0e-19 97.1 57 78.9
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 7.8e-19 96.7 59 71.2
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 7.8e-19 96.7 59 74.6
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 7.8e-19 96.7 59 74.6
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 7.8e-19 96.7 57 80.7
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 7.8e-19 96.7 58 75.9
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 7.8e-19 96.7 58 75.9
A01p12270 Brassica napus HOM05D001607 ORTHO05D001893 1.3e-18 95.9 57 78.9
BraA01t01171Z Brassica rapa HOM05D001607 ORTHO05D001893 1.3e-18 95.9 57 78.9
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 1.7e-18 95.5 58 75.9
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 2.3e-18 95.1 67 68.7
SGA_v2.0_scaffold60G21061 Striga asiatica HOM05D001607 ORTHO05D001893 2.3e-18 95.1 58 75.9
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 3.0e-18 94.7 57 78.9
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 3.0e-18 94.7 58 72.4
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 5.1e-18 94.0 59 72.9
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 8.6e-18 93.2 57 77.2
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 1.5e-17 92.4 58 70.7
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 1.5e-17 92.4 61 68.9
CAN.G307.23 Capsicum annuum HOM05D001607 ORTHO05D001893 2.5e-17 91.7 47 91.5
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 5.6e-17 90.5 58 72.4
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 9.5e-17 89.7 58 70.7
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 9.5e-17 89.7 51 82.4
THA.LOC104825607 Tarenaya hassleriana HOM05D001607 ORTHO05D000093 1.2e-16 89.4 52 82.7
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 2.1e-16 88.6 58 67.2
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 2.8e-16 88.2 58 72.4
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 2.8e-16 88.2 58 72.4
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 1.1e-15 86.3 57 68.4
HPP92_011359 Vanilla planifolia HOM05D001607 ORTHO05D001893 4.0e-15 84.3 57 66.7
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 5.2e-15 84.0 50 78.0
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 1.5e-14 82.4 57 64.9
SMO367G0172 Selaginella moellendorffii HOM05D001607 ORTHO05D001893 1.7e-13 79.0 58 63.8
Pp3c7_23000 Physcomitrium patens HOM05D001607 ORTHO05D001893 4.1e-12 74.3 58 56.9
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 9.2e-12 73.2 142 37.3
AagrBONN_evm.TU.Sc2ySwM_344.3434 Anthoceros agrestis HOM05D001607 ORTHO05D001893 2.1e-11 72.0 58 51.7
Mapoly0069s0029 Marchantia polymorpha HOM05D001607 ORTHO05D001893 2.7e-11 71.6 58 55.2
Pp3c2_32420 Physcomitrium patens HOM05D001607 ORTHO05D001893 6.6e-10 67.0 57 50.9
PRCOL_00005219 Prasinoderma coloniale HOM05D001607 ORTHO05D001893 2.8e-08 61.6 67 41.8
Glyma.09G137500 Glycine max HOM05D001607 ORTHO05D001893 8.9e-07 56.6 35 68.6
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 7.6e-06 53.5 55 58.2


User provided reference genes

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