Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p2009_0025 Quercus lobata HOM05D002263 ORTHO05D012916 1.5e-80 303.1 194 100.0
QL08p031651 Quercus lobata HOM05D002263 ORTHO05D012916 3.6e-74 282.0 233 82.8
QL08p037214 Quercus lobata HOM05D002263 ORTHO05D005465 2.4e-54 216.1 273 64.5
QL08p003462 Quercus lobata HOM05D002263 ORTHO05D012916 1.3e-47 193.7 333 52.9
QL05p087728 Quercus lobata HOM05D000176 ORTHO05D000106 2.6e-32 142.9 76 96.1
QL02p048481 Quercus lobata HOM05D002263 ORTHO05D012916 1.3e-31 140.6 237 56.5
QL04p008589 Quercus lobata HOM05D002263 ORTHO05D003537 1.6e-26 123.6 189 51.3
QL02p053675 Quercus lobata HOM05D002263 ORTHO05D012916 3.6e-26 122.5 105 96.2
CiPaw.14G001600 Carya illinoinensis HOM05D002263 ORTHO05D003537 8.1e-26 121.3 214 44.4
CiPaw.05G149100 Carya illinoinensis HOM05D002263 ORTHO05D003537 1.1e-25 120.9 191 47.6
QL05p088556 Quercus lobata HOM05D002263 ORTHO05D012916 5.8e-24 115.2 188 62.2
QL03p030217 Quercus lobata HOM05D000176 ORTHO05D000106 1.4e-22 110.5 192 59.4
QL02p043717 Quercus lobata HOM05D002263 ORTHO05D012916 2.4e-22 109.8 172 65.1
QL04p008574 Quercus lobata HOM05D002263 ORTHO05D003537 2.4e-22 109.8 188 56.9
Cfa010797 Carpinus fangiana HOM05D002263 ORTHO05D003537 1.1e-19 100.9 187 54.0
Haze_03174 Corylus avellana HOM05D002263 ORTHO05D003537 5.6e-19 98.6 187 57.8
QL12p004084 Quercus lobata HOM05D000176 ORTHO05D000106 1.2e-18 97.4 185 60.0
QL04p008074 Quercus lobata HOM05D002263 ORTHO05D003537 1.3e-15 87.4 188 46.3
QL04p008050 Quercus lobata HOM05D002263 ORTHO05D012916 4.9e-15 85.5 106 68.9
QL09p040356 Quercus lobata HOM05D002263 ORTHO05D012916 3.2e-14 82.8 46 100.0
QL08p021041 Quercus lobata HOM05D002263 ORTHO05D012916 1.4e-09 67.4 180 36.1
Actinidia19405 Actinidia chinensis HOM05D002263 ORTHO05D003537 1.5e-08 63.9 186 36.6
QL02p000117 Quercus lobata HOM05D003289 ORTHO05D004594 1.7e-07 60.5 28 96.4
QL02p084804 Quercus lobata HOM05D000165 ORTHO05D005214 1.7e-07 60.5 28 96.4
QL09p040321 Quercus lobata HOM05D005380 ORTHO05D006601 4.9e-07 58.9 44 77.3
TAR622G0048 Trochodendron aralioides HOM05D000165 ORTHO05D005214 4.9e-07 58.9 39 69.2
MD09G1054900 Malus domestica HOM05D000165 ORTHO05D005214 1.1e-06 57.8 39 69.2
MD09G1055300 Malus domestica HOM05D000165 ORTHO05D005214 1.1e-06 57.8 39 69.2
MD17G1053000 Malus domestica HOM05D000165 ORTHO05D005214 1.1e-06 57.8 39 69.2
TWI73G0071 Tripterygium wilfordii HOM05D002263 ORTHO05D003537 1.4e-06 57.4 179 34.6
GSVIVG01011459001 Vitis vinifera HOM05D000165 ORTHO05D005214 1.4e-06 57.4 34 70.6
PGR083G2318 Punica granatum HOM05D000165 ORTHO05D005214 1.9e-06 57.0 28 89.3
Eucgr.G02070 Eucalyptus grandis HOM05D000165 ORTHO05D005214 2.4e-06 56.6 28 85.7
Lj2g0010444 Lotus japonicus HOM05D000165 ORTHO05D005214 3.2e-06 56.2 43 60.5
Ciclev10030505m.g Citrus clementina HOM05D002263 ORTHO05D003537 4.2e-06 55.8 176 39.8
CSS0021570 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 5.4e-06 55.5 186 35.5
MSTRG.15468 Avicennia marina HOM05D000165 ORTHO05D005214 7.1e-06 55.1 28 89.3
Peaxi162Scf00247g00320 Petunia axillaris HOM05D000165 ORTHO05D005214 7.1e-06 55.1 28 85.7
PGSC0003DMG400018560 Solanum tuberosum HOM05D000165 ORTHO05D005214 7.1e-06 55.1 28 85.7
Lalb_Chr06g0175221 Lupinus albus HOM05D000165 ORTHO05D005214 9.3e-06 54.7 28 82.1
Solyc11g070175.1 Solanum lycopersicum HOM05D000165 ORTHO05D005214 9.3e-06 54.7 28 85.7
Solyc11g070187.1 Solanum lycopersicum HOM05D000165 ORTHO05D005214 9.3e-06 54.7 28 85.7
vmacro18176 Vaccinium macrocarpon HOM05D000165 ORTHO05D005214 9.3e-06 54.7 28 82.1


User provided reference genes

Program Settings