Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p1844_0084 Quercus lobata HOM05D001331 ORTHO05D001157 1.1e-136 490.0 246 100.0
QL02p072114 Quercus lobata HOM05D001331 ORTHO05D001157 8.4e-129 463.8 248 94.8
QL02p072043 Quercus lobata HOM05D001331 ORTHO05D001157 4.5e-122 441.4 249 90.0
Haze_14837 Corylus avellana HOM05D001331 ORTHO05D001157 1.6e-71 273.5 237 59.1
CiPaw.03G052700 Carya illinoinensis HOM05D001331 ORTHO05D001157 2.5e-64 249.6 238 60.1
MD17G1015200 Malus domestica HOM05D001331 ORTHO05D001157 2.5e-40 169.9 243 43.6
Prupe.3G302600 Prunus persica HOM05D001331 ORTHO05D001157 5.2e-38 162.2 238 45.0
Potri.017G067400 Populus trichocarpa HOM05D001331 ORTHO05D001157 1.2e-34 151.0 235 41.7
RcHm_v2.0_Chr2g0174831 Rosa chinensis HOM05D001331 ORTHO05D001157 1.1e-30 137.9 236 38.1
Sabra17G0062300 Salix brachista HOM05D001331 ORTHO05D001157 4.4e-29 132.5 235 39.6
MD09G1015100 Malus domestica HOM05D001331 ORTHO05D001157 3.8e-28 129.4 241 39.8
Manes.15G158100 Manihot esculenta HOM05D001331 ORTHO05D001157 2.8e-23 113.2 261 31.4
Ciclev10014314m.g Citrus clementina HOM05D001331 ORTHO05D001157 2.2e-20 103.6 195 39.5
RcHm_v2.0_Chr2g0174821 Rosa chinensis HOM05D001331 ORTHO05D001157 2.2e-20 103.6 264 33.3
Atru.chr6.2517 Acer truncatum HOM05D001331 ORTHO05D001157 6.7e-17 92.0 222 32.0
FvH4_6g53040 Fragaria vesca HOM05D001331 ORTHO05D001157 1.6e-15 87.4 270 30.7
TWI12G0610 Tripterygium wilfordii HOM05D001331 ORTHO05D001157 6.2e-15 85.5 252 28.6
FAN09G0670 Fragaria x ananassa HOM05D001331 ORTHO05D001157 1.1e-14 84.7 270 30.4
MELO3C008211.2 Cucumis melo HOM05D001331 ORTHO05D001157 9.3e-11 71.6 235 28.5
Duzib093G1964 Durio zibethinus HOM05D001331 ORTHO05D001157 9.3e-11 71.6 184 33.2
Dinv25676 Davidia involucrata HOM05D001331 ORTHO05D001157 2.1e-10 70.5 222 28.4
Sed0009999 Sechium edule HOM05D001331 ORTHO05D001157 7.9e-10 68.6 240 27.5
Gorai.009G259300 Gossypium raimondii HOM05D001331 ORTHO05D001157 1.0e-09 68.2 246 29.7
TAR622G0469 Trochodendron aralioides HOM05D001331 ORTHO05D001157 1.0e-09 68.2 100 46.0
Gohir.A05G246800 Gossypium hirsutum HOM05D001331 ORTHO05D001157 1.3e-09 67.8 246 30.1
Gohir.D05G248300 Gossypium hirsutum HOM05D001331 ORTHO05D001157 2.3e-09 67.0 175 33.7
ClCG11G006940 Citrullus lanatus HOM05D001331 ORTHO05D001157 6.7e-09 65.5 230 27.0
CANSAT64G1743 Cannabis sativa HOM05D001331 ORTHO05D001157 8.7e-09 65.1 135 37.0
COL.COLO4_13736 Corchorus olitorius HOM05D001331 ORTHO05D001157 7.4e-08 62.0 250 29.6
GSVIVG01001820001 Vitis vinifera HOM05D001331 ORTHO05D001157 9.6e-08 61.6 95 40.0
Rhsim08G0045100 Rhododendron simsii HOM05D001331 ORTHO05D001157 2.8e-07 60.1 128 34.4
Actinidia30892 Actinidia chinensis HOM05D001331 ORTHO05D001157 1.4e-06 57.8 128 33.6
Dinv33362 Davidia involucrata HOM05D001331 ORTHO05D001157 5.3e-06 55.8 60 50.0


User provided reference genes

Program Settings