Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p0790_0012 Quercus lobata HOM05D003666 ORTHO05D004770 6.0e-71 270.8 141 100.0
Haze_27149 Corylus avellana HOM05D003666 ORTHO05D004770 1.3e-25 120.2 70 82.9
TAR022G0002 Trochodendron aralioides HOM05D003666 ORTHO05D004770 5.0e-17 91.7 76 61.8
Lsat_1_v5_gn_4_39621 Lactuca sativa HOM05D003666 ORTHO05D004770 1.1e-11 73.9 72 56.9
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 1.4e-11 73.6 72 56.9
Lsat_1_v5_gn_3_108200 Lactuca sativa HOM05D003666 ORTHO05D004770 4.1e-11 72.0 113 41.6
Ah.10g028210 Amaranthus hybridus HOM05D003666 ORTHO05D004770 7.0e-11 71.2 72 55.6
Ah.10g028760 Amaranthus hybridus HOM05D003666 ORTHO05D004770 7.0e-11 71.2 72 55.6
AUR62042334 Chenopodium quinoa HOM05D003666 ORTHO05D004770 7.0e-11 71.2 72 55.6
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 2.2e-09 66.2 116 39.7
HanXRQChr02g0045121 Helianthus annuus HOM05D003666 ORTHO05D004770 5.0e-09 65.1 72 52.8
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 1.9e-08 63.2 67 52.2
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 1.9e-08 63.2 116 37.9
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 1.9e-08 63.2 116 37.9
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.9e-08 63.2 69 50.7
Sp3g25750 Schrenkiella parvula HOM05D003666 ORTHO05D004770 1.9e-08 63.2 116 37.9
Potri.007G061921 Populus trichocarpa HOM05D003666 ORTHO05D004770 5.5e-08 61.6 64 53.1
Haze_26858 Corylus avellana HOM05D000729 ORTHO05D001063 1.2e-07 60.5 77 42.9
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 1.2e-07 60.5 116 37.9
Peaxi162Scf00147g00311 Petunia axillaris HOM05D003666 ORTHO05D004770 2.1e-07 59.7 64 53.1
arahy.Tifrunner.gnm1.ann1.A5I0RB Arachis hypogaea HOM05D003666 ORTHO05D004770 4.7e-07 58.5 64 50.0
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 4.7e-07 58.5 64 51.6
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 4.7e-07 58.5 64 51.6
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 4.7e-07 58.5 116 37.9
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 6.1e-07 58.2 67 50.7
Lj2A1228G69 Lonicera japonica HOM05D003666 ORTHO05D004770 1.0e-06 57.4 111 37.8
ECA039G0030 Erigeron canadensis HOM05D005794 ORTHO05D006814 1.4e-06 57.0 58 41.4
Duzib116G0905 Durio zibethinus HOM05D005794 ORTHO05D006814 1.8e-06 56.6 58 41.4
Gorai.001G162400 Gossypium raimondii HOM05D005794 ORTHO05D006814 1.8e-06 56.6 58 41.4
Thhalv10015949m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 2.3e-06 56.2 60 51.7
Ah.10g027990 Amaranthus hybridus HOM05D005794 ORTHO05D006814 3.0e-06 55.8 58 39.7
EL10Ac1g02199 Beta vulgaris HOM05D005794 ORTHO05D006814 3.0e-06 55.8 58 39.7
Solyc00g013180.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 3.0e-06 55.8 109 38.5
CANSAT16G0022 Cannabis sativa HOM05D005794 ORTHO05D006814 4.0e-06 55.5 58 39.7
Gohir.D09G016300 Gossypium hirsutum HOM05D003666 ORTHO05D004770 4.0e-06 55.5 99 40.4
Ah.02g118920 Amaranthus hybridus HOM05D005794 ORTHO05D006814 5.2e-06 55.1 65 35.4
Ah.10g028710 Amaranthus hybridus HOM05D005794 ORTHO05D006814 5.2e-06 55.1 66 34.8
VMungo0720G2970 Vigna mungo HOM05D005794 ORTHO05D006814 6.7e-06 54.7 62 38.7
Gohir.A12G076865 Gossypium hirsutum HOM05D003666 ORTHO05D004770 8.8e-06 54.3 51 56.9
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 8.8e-06 54.3 79 45.6


User provided reference genes

Program Settings