Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p0428_0015 Quercus lobata HOM05D001828 ORTHO05D009885 1.4e-130 469.5 232 100.0
QL93p0381_0031 Quercus lobata HOM05D007855 ORTHO05D003704 2.6e-79 299.3 148 100.0
QL93p0258_0004 Quercus lobata HOM05D001029 ORTHO05D000917 7.1e-37 158.3 105 77.1
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 8.2e-17 91.7 61 73.8
QL02p029509 Quercus lobata HOM05D001828 ORTHO05D001745 5.3e-16 89.0 52 80.8
QL02p029498 Quercus lobata HOM05D001828 ORTHO05D001745 6.9e-16 88.6 50 80.0
QL02p004526 Quercus lobata HOM05D001828 ORTHO05D001745 1.5e-15 87.4 50 80.0
QL04p056327 Quercus lobata HOM05D001828 ORTHO05D009885 2.0e-15 87.0 47 83.0
arahy.Tifrunner.gnm1.ann1.HA5ZC6 Arachis hypogaea HOM05D001828 ORTHO05D009885 3.4e-15 86.3 62 72.6
Atru.chr10.37 Acer truncatum HOM05D001828 ORTHO05D001745 1.7e-14 84.0 45 86.7
Atru.chr10.43 Acer truncatum HOM05D001828 ORTHO05D001745 1.7e-14 84.0 45 86.7
Atru.chr9.1 Acer truncatum HOM05D001828 ORTHO05D001745 1.7e-14 84.0 45 86.7
Atru.chr9.218 Acer truncatum HOM05D001828 ORTHO05D001745 1.7e-14 84.0 45 86.7
FAN07G1979 Fragaria x ananassa HOM05D029018 ORTHO05D009885 2.9e-14 83.2 45 86.7
FAN28G0217 Fragaria x ananassa HOM05D029018 ORTHO05D009885 2.9e-14 83.2 45 86.7
arahy.Tifrunner.gnm1.ann1.CYZ3KW Arachis hypogaea HOM05D001828 ORTHO05D001745 3.8e-14 82.8 61 68.9
arahy.Tifrunner.gnm1.ann1.V6U7IH Arachis hypogaea HOM05D001828 ORTHO05D001745 6.5e-14 82.0 53 75.5
CSS0048211 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D009885 8.5e-14 81.6 183 35.0
Sopen00g001870 Solanum pennellii HOM05D003608 ORTHO05D000917 1.1e-13 81.3 106 45.3
CSS0027849 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 1.4e-13 80.9 52 73.1
unitig_676.g29551 Utricularia gibba HOM05D001029 ORTHO05D000917 2.5e-13 80.1 49 79.6
arahy.Tifrunner.gnm1.ann1.B2M0SA Arachis hypogaea HOM05D001828 ORTHO05D001745 3.2e-13 79.7 79 54.4
FAN08G2289 Fragaria x ananassa HOM05D001828 ORTHO05D009885 3.2e-13 79.7 45 82.2
CSS0030230 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 4.2e-13 79.3 49 77.6
unitig_135.g35493 Utricularia gibba HOM05D001029 ORTHO05D009885 7.2e-13 78.6 48 79.2
CDE02G0001 Ceratophyllum demersum HOM05D001828 ORTHO05D001745 1.6e-12 77.4 44 77.3
CDE02G2883 Ceratophyllum demersum HOM05D001828 ORTHO05D001745 1.6e-12 77.4 44 77.3
CDE02G3303 Ceratophyllum demersum HOM05D001828 ORTHO05D001745 1.6e-12 77.4 44 77.3
PGSC0003DMG400044276 Solanum tuberosum HOM05D001828 ORTHO05D001745 1.6e-12 77.4 44 81.8
CSS0047713 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 2.3e-11 73.6 52 67.3
ScUNg0000970 Simmondsia chinensis HOM05D007167 ORTHO05D009885 2.3e-11 73.6 44 77.3
LjContig00371g0019658 Lotus japonicus HOM05D001828 ORTHO05D000917 3.0e-11 73.2 62 62.9
LjContig00372g0002420 Lotus japonicus HOM05D001828 ORTHO05D000917 3.0e-11 73.2 62 62.9
Oeu020383.1 Olea europaea HOM05D000920 ORTHO05D004854 3.9e-11 72.8 48 70.8
EL10As7g23711 Beta vulgaris HOM05D001828 ORTHO05D001745 2.6e-10 70.1 55 65.5
Medtr0055s0130 Medicago truncatula HOM05D001828 ORTHO05D001745 4.4e-10 69.3 50 70.0
Oeu006837.1 Olea europaea HOM05D001828 ORTHO05D001745 7.4e-10 68.6 52 63.5
PGSC0003DMG400035737 Solanum tuberosum HOM05D001828 ORTHO05D001745 7.4e-10 68.6 38 84.2
FAN25G1010 Fragaria x ananassa HOM05D008177 ORTHO05D010128 1.3e-09 67.8 44 70.5
Psat3g188680 Pisum sativum HOM05D003608 ORTHO05D010128 1.7e-09 67.4 35 88.6
Sc06g0003800 Simmondsia chinensis HOM05D001828 ORTHO05D009885 2.2e-09 67.0 35 88.6
Sopen07g009460 Solanum pennellii HOM05D003608 ORTHO05D010452 3.7e-09 66.2 94 42.6
Medtr5g031940 Medicago truncatula HOM05D001828 ORTHO05D009885 6.3e-09 65.5 45 68.9
EL10Ac2g03013 Beta vulgaris HOM05D001828 ORTHO05D001745 8.2e-09 65.1 45 71.1
Sopen00g005120 Solanum pennellii HOM05D000691 ORTHO05D000378 2.4e-08 63.5 57 56.1
Sc06g0003810 Simmondsia chinensis HOM05D007167 ORTHO05D009885 4.1e-08 62.8 48 62.5
Psat7g211960 Pisum sativum HOM05D001828 ORTHO05D001745 8.5e-06 55.1 33 75.8


User provided reference genes

Program Settings