Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p0209_0016 Quercus lobata HOM05D009378 ORTHO05D010101 6.3e-143 510.8 259 100.0
QL09p024175 Quercus lobata HOM05D009378 ORTHO05D010101 5.5e-139 497.7 259 97.7
QL09p024149 Quercus lobata HOM05D009378 ORTHO05D010101 2.3e-116 422.5 259 83.4
QL93p0209_0042 Quercus lobata HOM05D009378 ORTHO05D010101 2.3e-116 422.5 259 83.4
QL09p024465 Quercus lobata HOM05D000125 ORTHO05D010101 3.9e-84 315.5 255 65.5
QL09p024439 Quercus lobata HOM05D009378 ORTHO05D010101 2.1e-82 309.7 256 65.2
Haze_13413 Corylus avellana HOM05D000125 ORTHO05D010101 4.2e-62 242.3 264 55.3
QL05p062837 Quercus lobata HOM05D009378 ORTHO05D010101 1.5e-59 233.8 275 50.2
QL09p024027 Quercus lobata HOM05D009378 ORTHO05D010101 1.3e-50 204.1 265 47.2
Haze_14777 Corylus avellana HOM05D000125 ORTHO05D010101 4.8e-50 202.2 268 49.6
Cfa016029 Carpinus fangiana HOM05D009378 ORTHO05D010101 4.5e-48 195.7 253 45.1
Cfa016027 Carpinus fangiana HOM05D009378 ORTHO05D010101 1.7e-47 193.7 257 45.1
Cfa007320 Carpinus fangiana HOM05D000125 ORTHO05D010101 8.5e-47 191.4 269 49.4
QL09p024013 Quercus lobata HOM05D008014 ORTHO05D010101 4.2e-46 189.1 263 45.2
CiPaw.06G031800 Carya illinoinensis HOM05D000125 ORTHO05D010101 9.4e-46 188.0 266 45.9
Haze_00404 Corylus avellana HOM05D000125 ORTHO05D010101 1.6e-45 187.2 250 43.2
QL02p073603 Quercus lobata HOM05D000125 ORTHO05D010101 5.1e-44 182.2 201 51.2
Cfa016030 Carpinus fangiana HOM05D000125 ORTHO05D010101 3.3e-43 179.5 258 44.6
Haze_00427 Corylus avellana HOM05D000125 ORTHO05D010101 9.7e-43 177.9 266 44.4
Haze_00406 Corylus avellana HOM05D000125 ORTHO05D010101 2.8e-42 176.4 260 43.5
Cfa016031 Carpinus fangiana HOM05D000125 ORTHO05D010101 6.3e-42 175.3 258 43.4
Haze_00511 Corylus avellana HOM05D009378 ORTHO05D010101 9.4e-38 161.4 184 51.6
Cfa013571 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.8e-33 147.1 263 38.0
QL09p028133 Quercus lobata HOM05D009378 ORTHO05D010101 6.5e-31 138.7 260 37.7
QL09p045403 Quercus lobata HOM05D000125 ORTHO05D010101 1.3e-26 124.4 124 58.9
TWI81G0642 Tripterygium wilfordii HOM05D000125 ORTHO05D010101 2.2e-26 123.6 282 32.6
Haze_19953 Corylus avellana HOM05D009378 ORTHO05D010101 3.7e-26 122.9 242 35.5
Cfa016894 Carpinus fangiana HOM05D000125 ORTHO05D010101 9.1e-25 118.2 264 32.6
Haze_00401 Corylus avellana HOM05D009378 ORTHO05D010101 3.6e-21 106.3 106 53.8
QL04p029779 Quercus lobata HOM05D020596 ORTHO05D010101 1.8e-20 104.0 151 41.1
CSS0003795 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D010101 6.8e-20 102.1 235 33.2
CSS0030731 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.5e-19 100.9 259 30.5
Cpa.g.sc623.3 Carica papaya HOM05D009378 ORTHO05D010101 1.1e-17 94.7 258 30.6
QL04p029580 Quercus lobata HOM05D000125 ORTHO05D000120 1.4e-17 94.4 163 37.4
QL04p029877 Quercus lobata HOM05D020596 ORTHO05D010101 1.4e-17 94.4 163 37.4
PGR031G1316 Punica granatum HOM05D000125 ORTHO05D010101 1.8e-17 94.0 256 27.0
Haze_00441 Corylus avellana HOM05D000125 ORTHO05D010101 7.0e-17 92.0 160 38.8
PGR031G1223 Punica granatum HOM05D009378 ORTHO05D010101 2.0e-16 90.5 266 26.3
PGR042G0442 Punica granatum HOM05D000125 ORTHO05D000807 2.7e-16 90.1 223 32.3
CANSAT21G1400 Cannabis sativa HOM05D000125 ORTHO05D010101 5.0e-15 85.9 262 29.8
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 5.0e-15 85.9 153 36.6
CSS0003791 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 6.6e-15 85.5 100 47.0
CSS0029307 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.9e-14 84.0 206 34.0
QL04p029513 Quercus lobata HOM05D000125 ORTHO05D000120 1.9e-14 84.0 209 32.1
CSS0032415 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.5e-14 83.6 142 38.7
QL04p029700 Quercus lobata HOM05D020596 ORTHO05D010101 3.3e-14 83.2 144 36.1
CSS0022186 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.5e-14 82.4 141 37.6
CSS0042755 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.5e-14 82.4 218 29.8
CANSAT21G1703 Cannabis sativa HOM05D000125 ORTHO05D000120 7.2e-14 82.0 263 29.3
Eucgr.E00385 Eucalyptus grandis HOM05D000125 ORTHO05D010101 7.2e-14 82.0 223 27.4
Actinidia02169 Actinidia chinensis HOM05D000125 ORTHO05D030879 2.8e-13 80.1 181 30.9
QL04p029334 Quercus lobata HOM05D020596 ORTHO05D010101 3.6e-13 79.7 144 36.1
CSS0010878 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.7e-13 79.3 136 36.8
CSS0034581 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.7e-13 79.3 198 29.3
CSS0027146 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.4e-12 77.8 142 37.3
Sed0024411 Sechium edule HOM05D024292 ORTHO05D010101 2.3e-12 77.0 262 25.2
CSS0047661 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.0e-12 76.6 118 35.6
Gohir.A04G040400 Gossypium hirsutum HOM05D008014 ORTHO05D009981 3.0e-12 76.6 146 31.5
Cpa.g.sc623.1 Carica papaya HOM05D009378 ORTHO05D010101 6.8e-12 75.5 115 36.5
PGR102G3309 Punica granatum HOM05D000125 ORTHO05D010101 8.9e-12 75.1 255 27.5
PGR044G2047 Punica granatum HOM05D009378 ORTHO05D010101 1.2e-11 74.7 212 26.4
Ciclev10027164m.g Citrus clementina HOM05D000125 ORTHO05D000120 1.5e-11 74.3 189 29.6
Actinidia13804 Actinidia chinensis HOM05D000125 ORTHO05D030879 2.6e-11 73.6 157 31.8
Gohir.A04G040100 Gossypium hirsutum HOM05D008014 ORTHO05D009981 3.4e-11 73.2 130 29.2
PGR042G3408 Punica granatum HOM05D000125 ORTHO05D000120 4.4e-11 72.8 109 36.7
Eucgr.E00390 Eucalyptus grandis HOM05D009378 ORTHO05D010101 5.7e-11 72.4 175 30.3
Gorai.009G371800 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.7e-10 70.9 130 29.2
Gohir.A04G040200 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.2e-10 70.5 130 28.5
Gohir.D05G343433 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.2e-10 70.5 215 23.3
Gorai.009G369600 Gossypium raimondii HOM05D008014 ORTHO05D009981 2.2e-10 70.5 130 28.5
Gohir.D05G342750 Gossypium hirsutum HOM05D008014 ORTHO05D009981 4.9e-10 69.3 130 31.5
COL.COLO4_30081 Corchorus olitorius HOM05D008014 ORTHO05D009981 1.1e-09 68.2 168 29.2
Gorai.009G369100 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.4e-09 67.8 130 30.8
Actinidia13806 Actinidia chinensis HOM05D000125 ORTHO05D030879 1.8e-09 67.4 190 27.4
Ciclev10027597m.g Citrus clementina HOM05D000125 ORTHO05D000120 2.4e-09 67.0 199 27.6
Gohir.D05G342800 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.4e-09 67.0 141 29.1
Gorai.009G369400 Gossypium raimondii HOM05D008014 ORTHO05D009981 2.4e-09 67.0 128 30.5
Gohir.D01G044000 Gossypium hirsutum HOM05D008014 ORTHO05D009981 5.4e-09 65.9 132 29.5
ClCG01G004320 Citrullus lanatus HOM05D024292 ORTHO05D010101 9.2e-09 65.1 208 27.4
Duzib213G1088 Durio zibethinus HOM05D008014 ORTHO05D009981 9.2e-09 65.1 126 28.6
Gorai.002G063200 Gossypium raimondii HOM05D008014 ORTHO05D009981 9.2e-09 65.1 132 28.8
Thecc.04G233100 Theobroma cacao HOM05D021021 ORTHO05D022794 1.2e-08 64.7 191 28.3
MELO3C005509.2 Cucumis melo HOM05D024292 ORTHO05D010101 1.6e-08 64.3 252 23.0
CANSAT11G2008 Cannabis sativa HOM05D000125 ORTHO05D010101 5.9e-08 62.4 206 26.2
Ciclev10014060m.g Citrus clementina HOM05D000125 ORTHO05D000120 5.9e-08 62.4 164 29.3
Gohir.A01G057332 Gossypium hirsutum HOM05D008014 ORTHO05D009981 5.9e-08 62.4 172 27.9
Thecc.07G105600 Theobroma cacao HOM05D008014 ORTHO05D009981 5.9e-08 62.4 195 23.1
Gohir.A01G057400 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.3e-07 61.2 125 28.8
Dinv20791 Davidia involucrata HOM05D000699 ORTHO05D000519 1.7e-07 60.8 163 28.2
Duzib213G0359 Durio zibethinus HOM05D008014 ORTHO05D009981 2.3e-07 60.5 130 26.9
Gohir.A13G148400 Gossypium hirsutum HOM05D008014 ORTHO05D009981 3.9e-07 59.7 178 23.6
Gohir.D01G043800 Gossypium hirsutum HOM05D008014 ORTHO05D009981 3.9e-07 59.7 125 28.0
Gorai.002G063000 Gossypium raimondii HOM05D008014 ORTHO05D009981 3.9e-07 59.7 125 28.0
Gohir.A01G057600 Gossypium hirsutum HOM05D008014 ORTHO05D009981 5.0e-07 59.3 135 29.6
Gorai.009G369900 Gossypium raimondii HOM05D008014 ORTHO05D009981 6.6e-07 58.9 130 27.7
Gohir.D01G043732 Gossypium hirsutum HOM05D008014 ORTHO05D009981 1.5e-06 57.8 136 29.4
Gorai.002G062900 Gossypium raimondii HOM05D008014 ORTHO05D009981 1.5e-06 57.8 136 29.4
Thecc.07G106000 Theobroma cacao HOM05D008014 ORTHO05D009981 1.5e-06 57.8 126 27.8
Thecc.03G303700 Theobroma cacao HOM05D008014 ORTHO05D009981 1.9e-06 57.4 189 26.5
Gohir.D13G153000 Gossypium hirsutum HOM05D008014 ORTHO05D009981 2.5e-06 57.0 101 30.7
Duzib187G0568 Durio zibethinus HOM05D008014 ORTHO05D009981 5.6e-06 55.8 131 27.5
Duzib187G1128 Durio zibethinus HOM05D008014 ORTHO05D009981 5.6e-06 55.8 110 30.9
Duzib187G1296 Durio zibethinus HOM05D008014 ORTHO05D009981 5.6e-06 55.8 141 29.1
Duzib187G1720 Durio zibethinus HOM05D008014 ORTHO05D009981 5.6e-06 55.8 110 30.9
Duzib187G1989 Durio zibethinus HOM05D008014 ORTHO05D009981 5.6e-06 55.8 110 30.9
Gorai.013G172900 Gossypium raimondii HOM05D008014 ORTHO05D009981 5.6e-06 55.8 114 28.1
Duzib170G0545 Durio zibethinus HOM05D008014 ORTHO05D009981 9.5e-06 55.1 186 24.2


User provided reference genes

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