Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 4.1e-93 344.7 177 100.0
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 1.6e-57 226.5 122 95.9
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 4.6e-52 208.4 174 68.4
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 8.6e-51 204.1 168 64.3
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 1.1e-50 203.8 171 66.1
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 1.1e-50 203.8 172 68.0
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 2.4e-45 186.0 179 62.0
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 3.2e-45 185.7 166 59.6
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 4.6e-44 181.8 171 60.8
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 7.8e-44 181.0 167 58.7
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 1.0e-43 180.6 175 56.6
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 3.0e-43 179.1 175 61.1
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 3.0e-43 179.1 168 57.1
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 5.1e-43 178.3 174 58.6
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 8.7e-43 177.6 170 58.2
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 1.1e-42 177.2 175 58.3
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 1.1e-42 177.2 178 55.1
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 1.5e-42 176.8 176 56.8
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 5.6e-42 174.9 132 66.7
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 7.3e-42 174.5 137 73.0
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 2.8e-41 172.6 174 58.6
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 8.1e-41 171.0 179 58.7
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 8.1e-41 171.0 168 55.4
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 1.1e-40 170.6 168 55.4
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 3.1e-40 169.1 170 59.4
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 3.1e-40 169.1 181 52.5
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 3.1e-40 169.1 178 58.4
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 4.0e-40 168.7 117 73.5
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 6.9e-40 167.9 176 54.5
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 6.9e-40 167.9 121 69.4
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 6.9e-40 167.9 169 57.4
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 9.0e-40 167.5 175 60.6
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 1.2e-39 167.2 168 55.4
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.5e-39 166.8 180 59.4
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 2.0e-39 166.4 180 59.4
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 3.4e-39 165.6 173 55.5
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 4.4e-39 165.2 120 68.3
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 7.6e-39 164.5 179 57.5
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 1.3e-38 163.7 179 57.0
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 2.2e-38 162.9 151 60.3
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 6.4e-38 161.4 118 69.5
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 6.4e-38 161.4 92 81.5
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.4e-37 160.2 164 59.1
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 5.4e-37 158.3 163 54.0
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 2.1e-36 156.4 132 62.1
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 2.7e-36 156.0 155 56.1
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 1.0e-35 154.1 181 53.0
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 2.3e-35 152.9 183 51.4
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 2.3e-35 152.9 133 63.9
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 3.9e-35 152.1 183 49.7
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 8.7e-35 151.0 120 66.7
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 1.5e-34 150.2 121 67.8
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 1.9e-34 149.8 171 52.6
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 4.3e-34 148.7 145 56.6
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 9.6e-34 147.5 118 66.1
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 1.6e-33 146.7 116 65.5
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 1.6e-33 146.7 172 50.0
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 1.6e-33 146.7 126 61.9
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 2.1e-33 146.4 116 65.5
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 2.1e-33 146.4 116 65.5
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 6.2e-33 144.8 147 57.8
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 8.1e-33 144.4 116 64.7
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 8.1e-33 144.4 116 64.7
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 1.1e-32 144.1 115 63.5
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 1.4e-32 143.7 107 72.9
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 1.8e-32 143.3 124 63.7
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 4.0e-32 142.1 175 45.1
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 5.3e-32 141.7 117 64.1
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 9.0e-32 141.0 114 63.2
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 9.0e-32 141.0 175 46.3
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 1.5e-31 140.2 147 51.7
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 2.0e-31 139.8 88 78.4
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 4.5e-31 138.7 88 77.3
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 5.8e-31 138.3 83 78.3
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 3.8e-30 135.6 116 58.6
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 8.4e-30 134.4 121 58.7
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.4e-29 133.7 84 75.0
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 5.4e-29 131.7 118 53.4
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 9.3e-29 131.0 87 70.1
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 3.5e-28 129.0 96 67.7
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 1.8e-27 126.7 76 80.3
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 3.3e-26 122.5 87 69.0
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 1.1e-24 117.5 95 57.9
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 4.9e-22 108.6 125 60.0
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 1.4e-21 107.1 91 52.7
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 2.5e-21 106.3 132 44.7
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 6.0e-20 101.7 68 67.6
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 1.6e-17 93.6 92 48.9
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 7.6e-15 84.7 115 54.8
Glyma.07G171100 Glycine max HOM05D007597 ORTHO05D009608 2.9e-14 82.8 120 42.5
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 5.5e-13 78.6 118 50.8
FAN07G1480 Fragaria x ananassa HOM05D007597 ORTHO05D009608 6.7e-11 71.6 72 63.9
FAN07G2660 Fragaria x ananassa HOM05D007597 ORTHO05D009608 6.7e-11 71.6 72 63.9
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 1.5e-10 70.5 89 40.4
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 1.3e-09 67.4 120 44.2
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 1.1e-08 64.3 79 54.4


User provided reference genes

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