Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p0141_0004 Quercus lobata HOM05D001070 ORTHO05D010233 8.4e-76 287.0 147 100.0
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 2.9e-44 182.2 144 72.2
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.2e-42 176.8 127 75.6
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 2.2e-36 156.0 116 70.7
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 1.5e-35 153.3 142 59.2
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 1.2e-34 150.2 139 62.6
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 2.1e-34 149.4 139 61.2
ClCG11G009260 Citrullus lanatus HOM05D001070 ORTHO05D010233 3.6e-34 148.7 113 69.9
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 2.4e-30 136.0 127 59.1
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 2.4e-30 136.0 127 60.6
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 2.4e-30 136.0 127 60.6
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 4.1e-30 135.2 134 59.7
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 4.1e-30 135.2 134 59.7
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 4.1e-30 135.2 134 59.7
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 4.1e-30 135.2 139 59.7
Gorai.008G099100 Gossypium raimondii HOM05D001070 ORTHO05D010233 5.3e-30 134.8 132 58.3
C09p25520 Brassica napus HOM05D001070 ORTHO05D010233 7.0e-30 134.4 127 58.3
Gorai.006G095000 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.2e-29 133.7 116 62.9
PSO357G0427 Papaver somniferum HOM05D001070 ORTHO05D010233 1.2e-29 133.7 127 59.8
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 4.5e-29 131.7 127 59.1
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.7e-28 129.8 111 67.6
Sed0027483 Sechium edule HOM05D001070 ORTHO05D010233 3.8e-28 128.6 111 63.1
Gohir.D12G091540 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.9e-27 126.3 114 62.3
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 9.4e-27 124.0 123 61.8
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 8.8e-25 117.5 111 61.3
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 9.8e-24 114.0 110 60.9
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.8e-22 109.8 133 49.6
C02p28780 Brassica napus HOM05D001070 ORTHO05D010233 2.0e-21 106.3 99 59.6
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 2.7e-21 105.9 138 46.4
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 2.9e-20 102.4 82 65.9
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 3.3e-19 99.0 131 45.0
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 7.2e-19 97.8 92 62.0
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 2.8e-18 95.9 140 42.1
Nitab4.5_0004841g0070 Nicotiana tabacum HOM05D001070 ORTHO05D022991 1.0e-17 94.0 90 61.1
Gorai.012G102000 Gossypium raimondii HOM05D001070 ORTHO05D010233 2.3e-17 92.8 62 75.8
CsaV3_1G025500 Cucumis sativus L. HOM05D001070 ORTHO05D010233 4.0e-17 92.0 101 59.4
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 1.2e-16 90.5 146 42.5
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 3.4e-16 89.0 131 44.3
HanXRQChr09g0258461 Helianthus annuus HOM05D001070 ORTHO05D010233 3.4e-16 89.0 131 44.3
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 3.4e-16 89.0 131 44.3
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 3.4e-16 89.0 131 44.3
ScUNg0000260 Simmondsia chinensis HOM05D001070 ORTHO05D002096 4.9e-15 85.1 65 70.8
HanXRQChr15g0465401 Helianthus annuus HOM05D001070 ORTHO05D002096 6.3e-15 84.7 122 45.9
Eucgr.I00434 Eucalyptus grandis HOM05D001070 ORTHO05D010233 5.4e-14 81.6 94 50.0
arahy.Tifrunner.gnm1.ann1.9IC8RT Arachis hypogaea HOM05D000533 ORTHO05D002807 4.5e-13 78.6 72 54.2
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 1.3e-12 77.0 53 71.7
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 1.3e-12 77.0 53 71.7
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 3.8e-12 75.5 53 69.8
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 1.1e-11 73.9 109 45.9
LjContig00318g0026726 Lotus japonicus HOM05D000445 ORTHO05D000314 2.5e-11 72.8 83 55.4
Nn1g08628 Nelumbo nucifera HOM05D001070 ORTHO05D002096 2.8e-10 69.3 52 65.4
ClCG02G009780 Citrullus lanatus HOM05D000445 ORTHO05D010658 1.0e-09 67.4 54 68.5
Peaxi162Scf01305g00039 Petunia axillaris HOM05D001070 ORTHO05D010233 1.0e-09 67.4 64 57.8
Psat0s1160g0280 Pisum sativum HOM05D001070 ORTHO05D002096 1.0e-09 67.4 132 34.1
Sc18g0005530 Simmondsia chinensis HOM05D001070 ORTHO05D010233 5.2e-09 65.1 45 75.6
Psat5g037720 Pisum sativum HOM05D001070 ORTHO05D010233 6.8e-09 64.7 133 33.8
AUR62015545 Chenopodium quinoa HOM05D000533 ORTHO05D001069 2.9e-07 59.3 83 45.8
AUR62014094 Chenopodium quinoa HOM05D000216 ORTHO05D000634 3.7e-07 58.9 64 54.7
Sed0020476 Sechium edule HOM05D020378 ORTHO05D010652 4.9e-07 58.5 47 57.4
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 1.9e-06 56.6 44 68.2
Migut.G00823 Erythranthe guttata HOM05D001070 ORTHO05D010233 3.2e-06 55.8 65 53.8
Migut.G01153 Erythranthe guttata HOM05D001070 ORTHO05D010233 5.4e-06 55.1 65 52.3
Eucgr.L00730 Eucalyptus grandis HOM05D001070 ORTHO05D010233 9.2e-06 54.3 37 73.0
HanXRQChr15g0465501 Helianthus annuus HOM05D001070 ORTHO05D010233 9.2e-06 54.3 51 56.9


User provided reference genes

Program Settings