Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p0107_0362 Quercus lobata HOM05D002270 ORTHO05D002866 1.2e-91 339.7 161 100.0
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 1.0e-82 310.1 154 96.1
QL01p053604 Quercus lobata HOM05D002270 ORTHO05D002866 1.2e-80 303.1 146 99.3
QL01p053642 Quercus lobata HOM05D002270 ORTHO05D002866 8.6e-74 280.4 134 98.5
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 2.7e-51 205.7 156 68.6
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 4.3e-49 198.4 170 63.5
COL.COLO4_12569 Corchorus olitorius HOM05D002270 ORTHO05D002866 3.2e-44 182.2 157 60.5
COL.COLO4_30723 Corchorus olitorius HOM05D002270 ORTHO05D002866 3.2e-44 182.2 157 60.5
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 3.2e-44 182.2 149 63.8
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 3.2e-44 182.2 150 62.7
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 3.2e-44 182.2 149 63.8
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 3.2e-44 182.2 148 64.2
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 9.3e-44 180.6 149 63.1
arahy.Tifrunner.gnm1.ann1.VXKY2I Arachis hypogaea HOM05D002270 ORTHO05D002866 2.1e-43 179.5 143 61.5
Cpa.g.sc30.17 Carica papaya HOM05D002270 ORTHO05D002866 2.1e-43 179.5 153 56.9
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 2.1e-43 179.5 143 62.9
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 4.6e-43 178.3 143 63.6
Lalb_Chr20g0113881 Lupinus albus HOM05D002270 ORTHO05D002866 4.6e-43 178.3 146 58.9
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 2.3e-42 176.0 146 61.6
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 3.9e-42 175.3 146 63.0
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 1.1e-41 173.7 152 57.9
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 1.1e-41 173.7 155 58.1
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 4.3e-41 171.8 147 60.5
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 7.4e-41 171.0 156 59.0
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 1.6e-40 169.9 156 58.3
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 6.2e-40 167.9 156 57.7
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 1.1e-39 167.2 165 53.3
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 1.1e-39 167.2 146 55.5
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 1.4e-39 166.8 151 55.6
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 1.2e-38 163.7 144 59.0
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 2.0e-38 162.9 147 56.5
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 2.6e-38 162.5 148 56.8
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 2.6e-38 162.5 145 53.8
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 4.5e-38 161.8 142 58.5
Nitab4.5_0003025g0030 Nicotiana tabacum HOM05D002270 ORTHO05D002866 4.5e-38 161.8 151 55.0
Solyc04g072270.1 Solanum lycopersicum HOM05D002270 ORTHO05D002866 5.8e-38 161.4 153 54.2
TAR636G1163 Trochodendron aralioides HOM05D002270 ORTHO05D002866 5.8e-38 161.4 156 51.9
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 7.6e-38 161.0 158 50.6
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 7.6e-38 161.0 147 55.1
Peaxi162Scf00226g00824 Petunia axillaris HOM05D002270 ORTHO05D002866 7.6e-38 161.0 156 50.0
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 1.0e-37 160.6 143 60.1
TPR.G9777 Trifolium pratense HOM05D002270 ORTHO05D002866 1.0e-37 160.6 146 55.5
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 1.7e-37 159.8 142 57.7
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 1.7e-37 159.8 143 55.9
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 1.7e-37 159.8 152 54.6
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 2.2e-37 159.5 149 58.4
Oeu047969.1 Olea europaea HOM05D002270 ORTHO05D002866 2.2e-37 159.5 149 53.7
Nitab4.5_0000433g0190 Nicotiana tabacum HOM05D002270 ORTHO05D002866 4.9e-37 158.3 151 54.3
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 6.5e-37 157.9 155 52.3
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 1.9e-36 156.4 150 56.0
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 5.5e-36 154.8 145 55.9
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 7.1e-36 154.5 153 52.9
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 9.3e-36 154.1 141 54.6
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 1.6e-35 153.3 145 53.1
TPR.G29953 Trifolium pratense HOM05D002270 ORTHO05D002866 2.1e-35 152.9 146 53.4
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 2.1e-35 152.9 147 55.1
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 1.0e-34 150.6 145 54.5
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 1.0e-34 150.6 148 52.0
Lsat_1_v5_gn_7_1960 Lactuca sativa HOM05D002270 ORTHO05D002866 1.3e-34 150.2 155 49.7
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 2.3e-34 149.4 155 50.3
VMungo0464G1016 Vigna mungo HOM05D002270 ORTHO05D002866 3.0e-34 149.1 135 59.3
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 3.9e-34 148.7 147 49.7
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 8.7e-34 147.5 143 51.0
Lsat_1_v5_gn_7_1981 Lactuca sativa HOM05D002270 ORTHO05D002866 2.5e-33 146.0 155 48.4
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 1.3e-32 143.7 153 51.0
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 2.2e-32 142.9 151 49.7
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 3.7e-32 142.1 145 51.0
ECA232G4141 Erigeron canadensis HOM05D002270 ORTHO05D002866 1.1e-31 140.6 155 47.7
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 1.1e-31 140.6 125 59.2
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 3.1e-31 139.0 152 48.0
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 5.3e-31 138.3 185 45.4
vmacro22219 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 9.0e-31 137.5 128 57.8
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 2.6e-30 136.0 146 52.7
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 4.5e-30 135.2 146 52.1
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 1.0e-29 134.0 147 49.0
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 1.0e-29 134.0 187 41.7
Hund05751 Selenicereus undatus HOM05D002270 ORTHO05D002866 1.7e-29 133.3 149 50.3
Sp5g22070 Schrenkiella parvula HOM05D002270 ORTHO05D002866 2.9e-29 132.5 146 49.3
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 3.8e-29 132.1 146 50.0
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 6.5e-29 131.3 147 49.7
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 1.9e-28 129.8 147 49.0
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 1.9e-28 129.8 148 48.0
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 4.2e-28 128.6 147 48.3
CDE12G0416 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 4.2e-28 128.6 155 43.2
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 7.9e-27 124.4 143 49.7
C05p38670 Brassica napus HOM05D002270 ORTHO05D002866 7.9e-27 124.4 143 49.7
Os10g0456950 Oryza sativa ssp. japonica HOM05D002270 ORTHO05D002866 8.8e-26 120.9 147 44.2
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 8.8e-26 120.9 147 44.2
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.5e-25 120.2 144 46.5
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.9e-25 119.8 146 44.5
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 4.3e-25 118.6 148 45.9
Ah.08g216540 Amaranthus hybridus HOM05D002270 ORTHO05D002866 9.7e-25 117.5 150 42.7
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 4.5e-22 108.6 151 41.7
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 5.9e-22 108.2 98 56.1
ATR0736G170 Amborella trichopoda HOM05D002270 ORTHO05D002866 1.7e-21 106.7 139 44.6
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 1.8e-18 96.7 111 51.4
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 2.3e-18 96.3 131 43.5
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 7.4e-17 91.3 154 35.7
SEGI_39038 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 1.3e-16 90.5 139 36.0
BcaC03g14803 Brassica carinata HOM05D002270 ORTHO05D002866 5.9e-14 81.6 89 48.3
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 5.9e-14 81.6 55 70.9
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 7.7e-14 81.3 106 48.1
SEGI_19104 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 6.7e-10 68.2 122 33.6
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 2.6e-09 66.2 116 31.0
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 9.7e-09 64.3 56 57.1
CBR_g742 Chara braunii HOM05D002270 ORTHO05D002866 7.0e-07 58.2 143 31.5


User provided reference genes

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