Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p0107_0129 Quercus lobata HOM05D000290 ORTHO05D007356 1.2e-29 132.5 66 100.0
Cfa001193 Carpinus fangiana HOM05D000290 ORTHO05D007356 1.2e-18 95.9 60 83.3
Haze_17371 Corylus avellana HOM05D000290 ORTHO05D007356 1.2e-18 95.9 60 83.3
QL08p065093 Quercus lobata HOM05D000290 ORTHO05D007356 1.8e-17 92.0 60 80.0
Sed0001960 Sechium edule HOM05D000290 ORTHO05D007356 5.2e-17 90.5 57 78.9
Thecc.10G185100 Theobroma cacao HOM05D000290 ORTHO05D007356 8.9e-17 89.7 60 78.3
MELO3C020171.2 Cucumis melo HOM05D000290 ORTHO05D007356 1.2e-16 89.4 57 78.9
CiPaw.01G307500 Carya illinoinensis HOM05D000290 ORTHO05D007356 2.6e-16 88.2 57 80.7
Ciclev10031187m.g Citrus clementina HOM05D000290 ORTHO05D007356 4.4e-16 87.4 60 73.3
CsaV3_5G011120 Cucumis sativus L. HOM05D000290 ORTHO05D007356 4.4e-16 87.4 57 77.2
Duzib114G0405 Durio zibethinus HOM05D000290 ORTHO05D007356 4.4e-16 87.4 60 75.0
Atru.chr12.193 Acer truncatum HOM05D000290 ORTHO05D007356 9.8e-16 86.3 60 73.3
Eucgr.G03148 Eucalyptus grandis HOM05D000290 ORTHO05D007356 1.3e-15 85.9 59 76.3
Manes.07G142100 Manihot esculenta HOM05D000290 ORTHO05D007356 1.7e-15 85.5 60 71.7
Lalb_Chr10g0102831 Lupinus albus HOM05D000290 ORTHO05D007356 2.2e-15 85.1 59 74.6
TAR623G1031 Trochodendron aralioides HOM05D000290 ORTHO05D007356 2.2e-15 85.1 60 73.3
ClCG07G005270 Citrullus lanatus HOM05D000290 ORTHO05D007356 2.8e-15 84.7 57 75.4
Potri.019G061300 Populus trichocarpa HOM05D000290 ORTHO05D007356 3.7e-15 84.3 60 71.7
Prupe.2G265700 Prunus persica HOM05D000290 ORTHO05D007356 3.7e-15 84.3 60 70.0
RcHm_v2.0_Chr1g0372581 Rosa chinensis HOM05D000290 ORTHO05D007356 4.9e-15 84.0 59 72.9
BcaB01g05943 Brassica carinata HOM05D000290 ORTHO05D007356 6.3e-15 83.6 60 75.0
A03p02240 Brassica napus HOM05D000290 ORTHO05D007356 6.3e-15 83.6 60 75.0
A10p30990 Brassica napus HOM05D000290 ORTHO05D007356 6.3e-15 83.6 60 73.3
C03p02580 Brassica napus HOM05D000290 ORTHO05D007356 6.3e-15 83.6 60 75.0
C09p71500 Brassica napus HOM05D000290 ORTHO05D007356 6.3e-15 83.6 60 73.3
BolC9t59913H Brassica oleracea HOM05D000290 ORTHO05D007356 6.3e-15 83.6 60 73.3
BraA03t09588Z Brassica rapa HOM05D000290 ORTHO05D007356 6.3e-15 83.6 60 75.0
BraA10t45144Z Brassica rapa HOM05D000290 ORTHO05D007356 6.3e-15 83.6 60 73.3
CANSAT56G2455 Cannabis sativa HOM05D000290 ORTHO05D007356 6.3e-15 83.6 60 70.0
Thhalv10013198m.g Eutrema salsugineum HOM05D000290 ORTHO05D007356 6.3e-15 83.6 60 75.0
TWI09G1541 Tripterygium wilfordii HOM05D000290 ORTHO05D007356 6.3e-15 83.6 57 77.2
Aa31LG11G6040 Aethionema arabicum HOM05D000290 ORTHO05D007356 8.3e-15 83.2 60 73.3
Cpa.g.sc19.40 Carica papaya HOM05D000290 ORTHO05D007356 8.3e-15 83.2 58 75.9
BcaB01g05718 Brassica carinata HOM05D000290 ORTHO05D007356 1.1e-14 82.8 60 73.3
BcaC06g32229 Brassica carinata HOM05D000290 ORTHO05D007356 1.1e-14 82.8 60 73.3
FvH4_7g26150 Fragaria vesca HOM05D000290 ORTHO05D007356 1.1e-14 82.8 59 71.2
FAN01G0461 Fragaria x ananassa HOM05D000290 ORTHO05D007356 1.1e-14 82.8 59 71.2
FAN06G0462 Fragaria x ananassa HOM05D000290 ORTHO05D007356 1.1e-14 82.8 59 71.2
Gohir.D04G011400 Gossypium hirsutum HOM05D000290 ORTHO05D007356 1.4e-14 82.4 60 70.0
Gorai.012G013600 Gossypium raimondii HOM05D000290 ORTHO05D007356 1.4e-14 82.4 60 70.0
arahy.Tifrunner.gnm1.ann1.FMIL5U Arachis hypogaea HOM05D000290 ORTHO05D007356 1.8e-14 82.0 59 69.5
arahy.Tifrunner.gnm1.ann1.S15XUX Arachis hypogaea HOM05D000290 ORTHO05D007356 1.8e-14 82.0 59 69.5
Sp6g37630 Schrenkiella parvula HOM05D000290 ORTHO05D007356 1.8e-14 82.0 60 73.3
Hma1.2p1_1805F.1_g303120 Hydrangea macrophylla HOM05D000290 ORTHO05D007356 2.4e-14 81.6 60 70.0
MD07G1235400 Malus domestica HOM05D000290 ORTHO05D007356 2.4e-14 81.6 60 68.3
Phvul.008G186400 Phaseolus vulgaris HOM05D000290 ORTHO05D007356 2.4e-14 81.6 59 71.2
GSVIVG01032656001 Vitis vinifera HOM05D000290 ORTHO05D007356 2.4e-14 81.6 60 71.7
Carub.0006s0413 Capsella rubella HOM05D000290 ORTHO05D007356 3.1e-14 81.3 60 73.3
Sabra19G0075100 Salix brachista HOM05D000290 ORTHO05D007356 4.1e-14 80.9 65 64.6
AL6G15040 Arabidopsis lyrata HOM05D000290 ORTHO05D007356 5.4e-14 80.5 61 72.1
AT5G05200 Arabidopsis thaliana HOM05D000290 ORTHO05D007356 5.4e-14 80.5 60 73.3
PGR142G4431 Punica granatum HOM05D000290 ORTHO05D007356 5.4e-14 80.5 58 75.9
COL.COLO4_19476 Corchorus olitorius HOM05D000290 ORTHO05D007356 7.0e-14 80.1 53 79.2
Oeu039386.1 Olea europaea HOM05D000290 ORTHO05D007356 7.0e-14 80.1 54 77.8
vmacro06903 Vaccinium macrocarpon HOM05D000290 ORTHO05D007356 7.0e-14 80.1 53 79.2
Ca_23242_v3 Cicer arietinum L. HOM05D000290 ORTHO05D007356 9.2e-14 79.7 58 69.0
Medtr5g068050 Medicago truncatula HOM05D000290 ORTHO05D007356 9.2e-14 79.7 55 74.5
Psat2g061840 Pisum sativum HOM05D000290 ORTHO05D007356 9.2e-14 79.7 55 74.5
TPR.G33928 Trifolium pratense HOM05D000290 ORTHO05D007356 9.2e-14 79.7 55 74.5
CARHR208040 Cardamine hirsuta HOM05D000290 ORTHO05D007356 1.2e-13 79.3 52 80.8
THA.LOC104823168 Tarenaya hassleriana HOM05D000290 ORTHO05D007356 1.2e-13 79.3 59 72.9
Glyma.14G186700 Glycine max HOM05D000290 ORTHO05D007356 2.0e-13 78.6 54 74.1
Rhsim03G0153700 Rhododendron simsii HOM05D000290 ORTHO05D007356 2.0e-13 78.6 53 79.2
Cc02_g05200 Coffea canephora HOM05D000290 ORTHO05D007356 3.5e-13 77.8 54 75.9
Gohir.A05G404300 Gossypium hirsutum HOM05D000290 ORTHO05D007356 3.5e-13 77.8 61 68.9
LjContig00408g0018075 Lotus japonicus HOM05D000290 ORTHO05D007356 3.5e-13 77.8 55 70.9
Nn2g10265 Nelumbo nucifera HOM05D000290 ORTHO05D007356 3.5e-13 77.8 59 72.9
CSS0016279 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007356 4.5e-13 77.4 53 77.4
CSS0037983 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007356 4.5e-13 77.4 53 77.4
Lj8A52T21 Lonicera japonica HOM05D000290 ORTHO05D007356 4.5e-13 77.4 53 75.5
Aqoxy4G03280 Aquilegia oxysepala HOM05D000290 ORTHO05D007356 5.9e-13 77.0 53 75.5
Ah.12g064460 Amaranthus hybridus HOM05D000290 ORTHO05D007356 7.8e-13 76.6 53 73.6
Dinv34498 Davidia involucrata HOM05D000290 ORTHO05D007356 7.8e-13 76.6 53 75.5
SalBow2G1855 Salvia bowleyana HOM05D000290 ORTHO05D007356 7.8e-13 76.6 50 80.0
EL10Ac2g02669 Beta vulgaris HOM05D000290 ORTHO05D007356 1.0e-12 76.3 53 71.7
ECA238G2935 Erigeron canadensis HOM05D000290 ORTHO05D007356 1.0e-12 76.3 53 73.6
Migut.F01231 Erythranthe guttata HOM05D000290 ORTHO05D007356 1.0e-12 76.3 54 74.1
AUR62024948 Chenopodium quinoa HOM05D000290 ORTHO05D007356 1.3e-12 75.9 53 69.8
AUR62030591 Chenopodium quinoa HOM05D000290 ORTHO05D007356 1.3e-12 75.9 53 69.8
Lsat_1_v5_gn_2_126721 Lactuca sativa HOM05D000290 ORTHO05D007356 1.3e-12 75.9 50 78.0
PSO170G6016 Papaver somniferum HOM05D000290 ORTHO05D007356 1.3e-12 75.9 50 78.0
SGA_v2.0_scaffold160G37737 Striga asiatica HOM05D000290 ORTHO05D007356 1.3e-12 75.9 54 74.1
PSO017G3158 Papaver somniferum HOM05D000290 ORTHO05D007356 1.7e-12 75.5 50 78.0
HanXRQChr14g0460511 Helianthus annuus HOM05D000290 ORTHO05D007356 2.3e-12 75.1 53 71.7
HPP92_017912 Vanilla planifolia HOM05D000290 ORTHO05D007356 3.9e-12 74.3 60 63.3
PGSC0003DMG400022947 Solanum tuberosum HOM05D000290 ORTHO05D007356 8.6e-12 73.2 54 66.7
ATR1127G020 Amborella trichopoda HOM05D000290 ORTHO05D007356 1.1e-11 72.8 50 72.0
Hund13437 Selenicereus undatus HOM05D000290 ORTHO05D007356 1.1e-11 72.8 52 71.2
Sopen03g025570 Solanum pennellii HOM05D000290 ORTHO05D007356 4.3e-11 70.9 54 64.8
Peaxi162Scf00073g02224 Petunia axillaris HOM05D000290 ORTHO05D007356 5.6e-11 70.5 54 64.8
Os07g0227800 Oryza sativa ssp. japonica HOM05D000290 ORTHO05D007356 7.3e-11 70.1 60 58.3
CAN.G1229.6 Capsicum annuum HOM05D000290 ORTHO05D007356 1.2e-10 69.3 54 63.0
CDE04G2552 Ceratophyllum demersum HOM05D000290 ORTHO05D007356 1.2e-10 69.3 50 72.0
Nitab4.5_0000171g0290 Nicotiana tabacum HOM05D000290 ORTHO05D007356 1.2e-10 69.3 54 63.0
unitig_90.g27551 Utricularia gibba HOM05D000290 ORTHO05D007356 1.2e-10 69.3 54 66.7
Solyc03g095620.4 Solanum lycopersicum HOM05D000290 ORTHO05D007356 1.6e-10 68.9 54 63.0
Nitab4.5_0005979g0040 Nicotiana tabacum HOM05D000290 ORTHO05D007356 3.6e-10 67.8 54 61.1
SEGI_22277 Sequoiadendron giganteum HOM05D000290 ORTHO05D007356 8.0e-10 66.6 52 65.4
Mapoly0021s0153 Marchantia polymorpha HOM05D000290 ORTHO05D007356 1.5e-08 62.4 55 54.5
SMO361G0050 Selaginella moellendorffii HOM05D000290 ORTHO05D007356 1.5e-08 62.4 49 61.2
AagrBONN_evm.TU.Sc2ySwM_344.3768 Anthoceros agrestis HOM05D000290 ORTHO05D007356 4.4e-08 60.8 59 54.2
Pp3c1_33470 Physcomitrium patens HOM05D000290 ORTHO05D007356 2.9e-07 58.2 59 52.5
CBR_g39925 Chara braunii HOM05D000290 ORTHO05D007356 3.7e-07 57.8 50 54.0
PRCOL_00000290 Prasinoderma coloniale HOM05D000290 ORTHO05D007356 4.9e-07 57.4 51 51.0


User provided reference genes

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