Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p0107_0059 Quercus lobata HOM05D006038 ORTHO05D007547 1.2e-29 132.5 67 100.0
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 1.8e-20 102.1 56 89.3
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 1.2e-13 79.3 56 67.9
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.6e-13 79.0 56 67.9
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 3.5e-13 77.8 56 67.9
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.9e-12 74.3 56 60.7
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.9e-12 74.3 56 60.7
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.9e-12 74.3 56 60.7
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.9e-12 74.3 56 60.7
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-11 72.8 56 58.9
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 1.1e-11 72.8 57 59.6
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.9e-11 72.0 56 60.7
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 2.5e-11 71.6 56 66.1
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 3.3e-11 71.2 55 58.2
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 4.3e-11 70.9 56 53.6
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.8e-10 68.2 56 57.1
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 2.8e-10 68.2 56 50.0
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 2.8e-10 68.2 56 50.0
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 3.7e-10 67.8 56 58.9
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 8.2e-10 66.6 56 57.1
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-09 65.5 56 58.9
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 2.4e-09 65.1 56 57.1
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 3.1e-09 64.7 56 53.6
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 4.0e-09 64.3 57 52.6
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 5.3e-09 63.9 57 52.6
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 1.5e-08 62.4 55 50.9
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 1.5e-08 62.4 55 56.4
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.6e-08 61.6 56 57.1
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 2.6e-08 61.6 55 52.7
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.4e-08 61.2 57 54.4
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.4e-08 61.2 57 54.4
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 7.6e-08 60.1 56 53.6
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 7.6e-08 60.1 55 49.1
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 7.6e-08 60.1 56 55.4
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 7.6e-08 60.1 56 50.0
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 7.6e-08 60.1 56 50.0
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 7.6e-08 60.1 54 50.0
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 1.0e-07 59.7 56 55.4
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 1.0e-07 59.7 54 53.7
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 1.3e-07 59.3 57 52.6
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 1.3e-07 59.3 56 51.8
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 1.7e-07 58.9 55 50.9
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 1.7e-07 58.9 56 53.6
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 2.2e-07 58.5 57 52.6
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 2.2e-07 58.5 56 50.0
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 3.8e-07 57.8 56 48.2
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 6.5e-07 57.0 55 47.3
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 8.4e-07 56.6 57 52.6
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 1.9e-06 55.5 54 48.1
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 2.5e-06 55.1 57 49.1
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 3.2e-06 54.7 56 48.2


User provided reference genes

Program Settings