Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p0107_0026 Quercus lobata HOM05D002907 ORTHO05D005554 4.2e-162 574.7 303 100.0
QL10p011037 Quercus lobata HOM05D002907 ORTHO05D000065 1.3e-102 377.1 303 71.9
QL03p025410 Quercus lobata HOM05D000005 ORTHO05D000065 6.5e-30 135.6 353 28.0
QL07p005779 Quercus lobata HOM05D002907 ORTHO05D005554 1.2e-28 131.3 291 32.3
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 1.2e-23 114.8 384 26.6
Solyc08g028810.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.2e-21 106.7 166 37.3
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 4.2e-21 106.3 382 26.4
QL07p006362 Quercus lobata HOM05D002907 ORTHO05D005554 6.1e-20 102.4 227 30.8
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 3.9e-19 99.8 353 24.9
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 5.1e-19 99.4 375 26.1
DCAR_020135 Daucus carota HOM05D002907 ORTHO05D005554 1.1e-18 98.2 235 28.5
QL93p0160_0004 Quercus lobata HOM05D002907 ORTHO05D000065 4.3e-18 96.3 270 32.2
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 9.7e-18 95.1 388 25.8
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 1.7e-17 94.4 223 29.6
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 1.7e-17 94.4 223 29.6
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.8e-17 92.8 214 27.6
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 1.1e-16 91.7 254 27.2
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 2.4e-16 90.5 254 27.2
Aqoxy3G01099 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 9.1e-16 88.6 392 21.9
CANSAT78G0666 Cannabis sativa HOM05D002907 ORTHO05D005554 9.1e-16 88.6 236 25.8
Hma1.2p1_0045F.1_g026410 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 2.0e-15 87.4 380 22.9
Nitab4.5_0009770g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.0e-15 87.4 220 26.4
Solyc10g050370.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.0e-15 87.4 207 30.0
Solyc07g017280.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.6e-15 87.0 240 27.9
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.4e-15 86.7 335 26.3
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 5.9e-15 85.9 239 28.5
Peaxi162Scf00505g00016 Petunia axillaris HOM05D002907 ORTHO05D005554 7.7e-15 85.5 234 26.1
CANSAT56G3687 Cannabis sativa HOM05D002907 ORTHO05D005554 2.2e-14 84.0 233 28.3
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 6.5e-14 82.4 377 24.1
PSO675G3596 Papaver somniferum HOM05D002907 ORTHO05D013727 8.5e-14 82.0 216 31.5
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 1.4e-13 81.3 87 43.7
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 1.9e-13 80.9 228 29.8
QL93p0100_0313 Quercus lobata HOM05D000038 ORTHO05D000612 2.5e-13 80.5 240 29.2
Aqoxy3G02886 Aquilegia oxysepala HOM05D003414 ORTHO05D003913 5.5e-13 79.3 330 22.4
Aqoxy4G01459 Aquilegia oxysepala HOM05D002907 ORTHO05D000174 7.2e-13 79.0 242 23.6
Aqoxy5G02969 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 7.2e-13 79.0 394 21.1
Solyc10g050400.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 9.4e-13 78.6 239 27.2
TWI53G0769 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.6e-12 77.8 244 24.6
TWI63G1000 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.6e-12 77.8 359 25.3
Peaxi162Scf00115g00007 Petunia axillaris HOM05D002907 ORTHO05D000065 2.7e-12 77.0 87 44.8
Aqoxy5G02850 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 3.6e-12 76.6 360 21.4
QL01p044581 Quercus lobata HOM05D002907 ORTHO05D005554 3.6e-12 76.6 189 30.7
Nitab4.5_0002746g0030 Nicotiana tabacum HOM05D002907 ORTHO05D000065 4.7e-12 76.3 65 47.7
Nitab4.5_0026714g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.7e-12 76.3 65 47.7
TWI79G1688 Tripterygium wilfordii HOM05D002907 ORTHO05D005554 1.8e-11 74.3 210 26.2
TWI77G0313 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.3e-11 73.9 370 24.1
CAN.G665.22 Capsicum annuum HOM05D002907 ORTHO05D005554 3.9e-11 73.2 239 26.4
Peaxi162Scf00816g00411 Petunia axillaris HOM05D002907 ORTHO05D005554 3.9e-11 73.2 336 23.2
CANSAT64G0304 Cannabis sativa HOM05D002907 ORTHO05D000065 5.1e-11 72.8 65 43.1
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 6.7e-11 72.4 353 24.9
Medtr4g070090 Medicago truncatula HOM05D002907 ORTHO05D000065 8.8e-11 72.0 383 24.3
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 8.8e-11 72.0 221 29.4
TPR.G6063 Trifolium pratense HOM05D000096 ORTHO05D000065 2.0e-10 70.9 362 23.2
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 2.6e-10 70.5 246 23.2
Peaxi162Scf00715g00062 Petunia axillaris HOM05D002907 ORTHO05D000065 2.6e-10 70.5 63 46.0
CAN.G181.47 Capsicum annuum HOM05D002907 ORTHO05D005554 3.3e-10 70.1 266 26.7
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 4.4e-10 69.7 301 28.2
Sopen08g012630 Solanum pennellii HOM05D000096 ORTHO05D000045 4.4e-10 69.7 60 51.7
TWI38G1001 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.4e-10 69.7 374 22.7
QL01p002746 Quercus lobata HOM05D057389 ORTHO05D050613 7.4e-10 68.9 70 55.7
TWI39G0063 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 9.7e-10 68.6 378 20.9
Nitab4.5_0001245g0050 Nicotiana tabacum HOM05D002907 ORTHO05D000065 1.3e-09 68.2 64 46.9
PSO447G0118 Papaver somniferum HOM05D002907 ORTHO05D013727 1.3e-09 68.2 214 24.8
Duzib160G0267 Durio zibethinus HOM05D002907 ORTHO05D000065 3.7e-09 66.6 230 27.4
TWI56G0628 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 3.7e-09 66.6 380 21.8
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 4.8e-09 66.2 277 24.2
Nitab4.5_0000488g0200 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.8e-09 66.2 84 35.7
Aqoxy109s001 Aquilegia oxysepala HOM05D000494 ORTHO05D005554 6.3e-09 65.9 234 24.4
Solyc11g032020.1 Solanum lycopersicum HOM05D002907 ORTHO05D000065 6.3e-09 65.9 74 41.9
TWI31G0819 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 6.3e-09 65.9 232 22.8
TWI32G0194 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 8.2e-09 65.5 380 21.3
TWI14G1065 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.1e-08 65.1 248 27.0
TWI38G0982 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.1e-08 65.1 365 21.9
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.4e-08 64.7 77 40.3
Aqoxy4G01036 Aquilegia oxysepala HOM05D000100 ORTHO05D000052 1.8e-08 64.3 258 22.1
Thecc.04G012000 Theobroma cacao HOM05D000096 ORTHO05D000045 1.8e-08 64.3 293 23.5
TWI36G0416 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 1.8e-08 64.3 135 31.9
TWI63G0188 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.8e-08 64.3 382 20.9
Solyc10g054240.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.4e-08 63.9 63 47.6
TWI53G0107 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.4e-08 63.9 220 24.1
Aa31LG7G11790 Aethionema arabicum HOM05D000353 ORTHO05D000174 3.1e-08 63.5 218 27.5
C03p68040 Brassica napus HOM05D000313 ORTHO05D000065 3.1e-08 63.5 316 25.0
BolC3t19028H Brassica oleracea HOM05D000313 ORTHO05D000065 3.1e-08 63.5 316 25.0
CAN.G865.8 Capsicum annuum HOM05D002907 ORTHO05D005554 3.1e-08 63.5 166 30.7
COL.COLO4_24757 Corchorus olitorius HOM05D025352 ORTHO05D025141 3.1e-08 63.5 68 35.3
Aqoxy7G01297 Aquilegia oxysepala HOM05D012735 ORTHO05D011950 5.3e-08 62.8 235 24.7
Aqoxy7G01312 Aquilegia oxysepala HOM05D012735 ORTHO05D011950 5.3e-08 62.8 235 24.7
Nitab4.5_0000037g0120 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.3e-08 62.8 205 25.4
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 7.0e-08 62.4 263 28.5
Aqoxy3G01586 Aquilegia oxysepala HOM05D000219 ORTHO05D005554 9.1e-08 62.0 137 28.5
DCAR_007005 Daucus carota HOM05D002907 ORTHO05D014614 9.1e-08 62.0 275 24.0
Nitab4.5_0001916g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 9.1e-08 62.0 201 22.9
TWI31G1318 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 9.1e-08 62.0 292 23.6
Aqoxy2G00023 Aquilegia oxysepala HOM05D002907 ORTHO05D013727 1.2e-07 61.6 243 24.3
arahy.Tifrunner.gnm1.ann1.1348G9 Arachis hypogaea HOM05D000353 ORTHO05D000174 2.0e-07 60.8 193 27.5
Lj4g0003601 Lotus japonicus HOM05D000353 ORTHO05D000174 2.0e-07 60.8 379 21.6
Sp4g05770 Schrenkiella parvula HOM05D000313 ORTHO05D000065 2.0e-07 60.8 81 40.7
Peaxi162Scf00871g00034 Petunia axillaris HOM05D002907 ORTHO05D005554 2.6e-07 60.5 304 24.0
Sopen05g018840 Solanum pennellii HOM05D002907 ORTHO05D005554 2.6e-07 60.5 70 40.0
Medtr5g027390 Medicago truncatula HOM05D002907 ORTHO05D000065 3.4e-07 60.1 245 26.9
Nitab4.5_0002702g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.4e-07 60.1 327 22.9
C01p17330 Brassica napus HOM05D000353 ORTHO05D000174 4.5e-07 59.7 190 24.7
Lsat_1_v5_gn_7_86861 Lactuca sativa HOM05D007823 ORTHO05D000174 4.5e-07 59.7 292 21.9
QL01p002640 Quercus lobata HOM05D057389 ORTHO05D050613 4.5e-07 59.7 66 50.0
RcHm_v2.0_Chr2g0150581 Rosa chinensis HOM05D007856 ORTHO05D003348 4.5e-07 59.7 109 30.3
Sopen01g015020 Solanum pennellii HOM05D002907 ORTHO05D005554 4.5e-07 59.7 79 35.4
TWI53G1742 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.5e-07 59.7 238 28.2
Hund19578 Selenicereus undatus HOM05D005768 ORTHO05D007100 1.0e-06 58.5 128 31.2
Solyc10g054170.3 Solanum lycopersicum HOM05D028602 ORTHO05D005554 1.0e-06 58.5 74 35.1
TWI60G0328 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 1.0e-06 58.5 372 21.5
Hma1.2p1_0051F.1_g029450 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.3e-06 58.2 61 45.9
Aqoxy1G02051 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 1.7e-06 57.8 151 28.5
arahy.Tifrunner.gnm1.ann1.DGZ9BS Arachis hypogaea HOM05D000353 ORTHO05D000174 1.7e-06 57.8 176 28.4
Peaxi162Scf00060g00311 Petunia axillaris HOM05D002441 ORTHO05D002376 1.7e-06 57.8 117 34.2
TPR.G15228 Trifolium pratense HOM05D000305 ORTHO05D000065 1.7e-06 57.8 210 27.1
TWI36G1694 Tripterygium wilfordii HOM05D000824 ORTHO05D003348 1.7e-06 57.8 161 29.8
TWI53G0762 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 1.7e-06 57.8 304 21.1
DCAR_016811 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-06 57.4 321 21.5
Medtr3g032330 Medicago truncatula HOM05D002907 ORTHO05D000065 2.2e-06 57.4 91 37.4
COL.COLO4_33148 Corchorus olitorius HOM05D000096 ORTHO05D000045 2.9e-06 57.0 123 31.7
Lsat_1_v5_gn_8_23420 Lactuca sativa HOM05D007823 ORTHO05D000174 2.9e-06 57.0 210 27.6
Nitab4.5_0000242g0060 Nicotiana tabacum HOM05D002907 ORTHO05D000065 2.9e-06 57.0 59 39.0
QL03p038017 Quercus lobata HOM05D000313 ORTHO05D000065 2.9e-06 57.0 142 33.8
Thecc.09G132200 Theobroma cacao HOM05D041041 ORTHO05D013683 2.9e-06 57.0 170 23.5
Lj4g0003450 Lotus japonicus HOM05D002907 ORTHO05D010433 3.8e-06 56.6 68 32.4
PSO170G4874 Papaver somniferum HOM05D002907 ORTHO05D013727 3.8e-06 56.6 125 29.6
Solyc02g055533.1 Solanum lycopersicum HOM05D003235 ORTHO05D003863 3.8e-06 56.6 43 55.8
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 6.5e-06 55.8 84 31.0
BcaC01g02161 Brassica carinata HOM05D000313 ORTHO05D000065 8.5e-06 55.5 225 25.8
Nitab4.5_0006891g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.5e-06 55.5 111 28.8
QL01p044591 Quercus lobata HOM05D002907 ORTHO05D005554 8.5e-06 55.5 136 30.9
TPR.G28204 Trifolium pratense HOM05D002907 ORTHO05D000065 8.5e-06 55.5 63 41.3


User provided reference genes

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