Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 3.4e-192 674.9 351 100.0
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 3.2e-166 588.6 335 92.2
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 8.3e-154 547.4 337 86.6
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 3.2e-89 332.8 322 62.7
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 8.1e-85 318.2 292 63.7
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 3.1e-60 236.5 229 62.0
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 7.7e-51 205.3 291 49.8
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 1.7e-50 204.1 292 49.3
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 2.1e-48 197.2 273 49.5
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 2.7e-48 196.8 290 47.6
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 2.6e-46 190.3 271 47.6
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 3.7e-45 186.4 281 47.3
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 4.1e-44 183.0 238 46.2
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 1.6e-43 181.0 200 55.0
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 2.0e-43 180.6 280 47.5
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 3.8e-42 176.4 204 50.0
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 1.2e-40 171.4 323 40.6
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 2.7e-40 170.2 218 50.0
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 6.1e-40 169.1 217 49.8
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 8.8e-39 165.2 289 41.9
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 9.8e-38 161.8 294 41.5
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 1.3e-37 161.4 223 50.2
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 4.8e-37 159.5 295 43.7
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 8.3e-37 158.7 213 47.4
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 1.1e-36 158.3 300 40.7
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 2.4e-36 157.1 194 51.5
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 2.4e-36 157.1 225 48.0
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 2.4e-36 157.1 292 39.7
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 2.4e-36 157.1 255 43.9
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 3.1e-36 156.8 225 48.0
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 5.4e-36 156.0 201 48.8
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 5.4e-36 156.0 197 48.7
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 5.4e-36 156.0 344 36.9
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 9.1e-36 155.2 293 41.3
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 1.6e-35 154.5 302 42.7
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 2.0e-35 154.1 298 39.9
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 1.3e-34 151.4 291 39.2
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 2.2e-34 150.6 301 39.9
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 5.0e-34 149.4 178 52.8
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 6.5e-34 149.1 226 46.9
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 1.5e-33 147.9 298 38.6
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 1.5e-33 147.9 191 49.2
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 1.5e-33 147.9 181 52.5
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 1.9e-33 147.5 245 43.3
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 7.2e-33 145.6 187 51.9
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 2.1e-32 144.1 203 45.8
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 2.7e-32 143.7 299 38.8
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 3.6e-32 143.3 253 42.3
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 4.0e-31 139.8 174 50.6
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 1.2e-30 138.3 166 49.4
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 1.2e-30 138.3 297 38.7
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 2.0e-30 137.5 203 43.8
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 2.6e-30 137.1 166 50.6
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 1.7e-29 134.4 249 37.8
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 1.7e-29 134.4 209 43.5
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 3.7e-29 133.3 205 42.4
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 6.3e-29 132.5 205 42.4
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 2.7e-27 127.1 274 39.4
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 1.3e-26 124.8 226 39.8
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 1.7e-26 124.4 239 36.0
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 2.9e-26 123.6 240 40.0
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 1.1e-25 121.7 292 34.2
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 3.3e-25 120.2 247 40.9
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 9.5e-25 118.6 259 36.3
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 1.2e-24 118.2 218 39.4
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 1.6e-24 117.9 172 44.8
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 2.8e-24 117.1 282 35.5
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 3.6e-24 116.7 138 48.6
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 3.6e-24 116.7 138 48.6
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 1.8e-23 114.4 170 45.9
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 8.9e-23 112.1 164 44.5
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 2.6e-22 110.5 88 59.1
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 3.4e-22 110.2 172 40.1
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 7.5e-22 109.0 302 36.8
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 4.9e-21 106.3 230 34.8
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 1.1e-20 105.1 124 52.4
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 2.4e-20 104.0 194 40.2
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 3.2e-20 103.6 122 48.4
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 1.2e-19 101.7 123 49.6
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 2.7e-19 100.5 135 44.4
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 5.9e-19 99.4 240 32.5
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 5.9e-19 99.4 135 45.2
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 7.8e-19 99.0 78 65.4
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 1.3e-18 98.2 170 41.2
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 7.3e-17 92.4 261 33.3
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 1.6e-16 91.3 80 58.8
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 5.2e-15 86.3 208 34.6
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 5.2e-15 86.3 241 30.3
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 6.8e-15 85.9 241 29.9
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 2.0e-14 84.3 80 58.8
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 2.0e-14 84.3 80 58.8
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 5.8e-14 82.8 103 50.5
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 9.8e-14 82.0 80 57.5
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 5.4e-12 76.3 137 37.2
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.3e-10 71.6 59 67.8
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 6.2e-08 62.8 238 30.7


User provided reference genes

Program Settings