Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 8.5e-75 283.5 135 100.0
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 1.1e-61 240.0 136 85.3
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 2.4e-61 238.8 136 85.3
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 2.2e-54 215.7 135 73.3
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.2e-54 215.7 136 77.9
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.2e-54 215.7 136 77.9
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 8.3e-54 213.8 137 76.6
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.2e-53 211.8 136 75.7
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 4.1e-53 211.5 136 76.5
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 5.4e-53 211.1 136 75.7
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 1.2e-52 209.9 138 73.9
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 1.6e-52 209.5 136 75.7
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 2.0e-52 209.1 136 74.3
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 2.7e-52 208.8 135 74.8
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 4.6e-52 208.0 135 76.3
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 4.6e-52 208.0 135 76.3
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 4.6e-52 208.0 137 74.5
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 7.8e-52 207.2 136 72.1
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 7.8e-52 207.2 134 76.9
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 1.0e-51 206.8 137 74.5
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 1.7e-51 206.1 139 71.9
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.7e-51 206.1 136 73.5
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.7e-51 206.1 135 75.6
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 1.7e-51 206.1 138 72.5
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.9e-51 204.9 136 74.3
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.3e-50 201.8 136 72.8
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 4.3e-50 201.4 137 73.0
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 5.6e-50 201.1 141 70.2
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 7.3e-50 200.7 134 72.4
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 7.3e-50 200.7 136 73.5
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 7.3e-50 200.7 132 75.8
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.2e-49 199.9 137 72.3
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.2e-49 199.9 138 71.0
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 2.1e-49 199.1 137 71.5
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 2.8e-49 198.7 137 71.5
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 3.6e-49 198.4 138 69.6
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 4.7e-49 198.0 136 71.3
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 4.7e-49 198.0 137 70.8
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 4.7e-49 198.0 136 71.3
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 6.2e-49 197.6 136 72.1
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.4e-48 196.4 136 69.9
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 1.4e-48 196.4 141 70.2
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 1.8e-48 196.1 137 69.3
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 1.8e-48 196.1 138 69.6
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 1.8e-48 196.1 136 68.4
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 2.3e-48 195.7 137 69.3
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 2.3e-48 195.7 137 70.1
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 6.8e-48 194.1 138 69.6
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 8.9e-48 193.7 136 67.6
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.2e-47 193.4 131 72.5
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 1.5e-47 193.0 135 70.4
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 1.5e-47 193.0 135 70.4
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 1.5e-47 193.0 137 69.3
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 2.0e-47 192.6 138 68.8
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.6e-47 192.2 136 69.9
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 3.4e-47 191.8 136 67.6
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 3.4e-47 191.8 139 69.1
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 3.4e-47 191.8 137 68.6
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 5.8e-47 191.0 137 67.9
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 9.8e-47 190.3 118 78.0
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 9.8e-47 190.3 136 66.2
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 1.3e-46 189.9 136 71.3
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 1.3e-46 189.9 136 69.1
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 1.7e-46 189.5 137 67.9
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 1.7e-46 189.5 137 67.9
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 2.2e-46 189.1 142 68.3
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 2.9e-46 188.7 135 65.9
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 2.9e-46 188.7 134 67.9
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 8.3e-46 187.2 138 68.1
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 1.4e-45 186.4 118 76.3
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 9.2e-45 183.7 106 80.2
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.2e-44 183.3 127 70.9
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.2e-44 183.3 127 70.9
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 6.0e-44 181.0 136 64.7
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.3e-43 179.9 131 66.4
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 2.3e-43 179.1 133 64.7
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 3.0e-43 178.7 131 66.4
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 3.0e-43 178.7 139 60.4
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 5.1e-43 177.9 134 66.4
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 8.6e-43 177.2 137 63.5
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 1.5e-42 176.4 132 65.2
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 1.9e-42 176.0 135 63.7
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.9e-42 176.0 135 65.9
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 1.9e-42 176.0 121 73.6
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 1.9e-42 176.0 121 73.6
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 4.3e-42 174.9 134 63.4
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 4.3e-42 174.9 121 73.6
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 5.6e-42 174.5 138 61.6
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 9.5e-42 173.7 138 61.6
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 1.2e-41 173.3 137 62.0
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 1.2e-41 173.3 138 61.6
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 1.2e-41 173.3 137 62.0
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 2.8e-41 172.2 135 62.2
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 2.8e-41 172.2 133 63.2
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 2.8e-41 172.2 137 62.0
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 3.6e-41 171.8 137 62.0
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 3.6e-41 171.8 137 61.3
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 3.6e-41 171.8 139 62.6
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 6.2e-41 171.0 138 60.9
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 1.1e-40 170.2 124 66.1
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 1.8e-40 169.5 119 68.9
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 1.8e-40 169.5 135 63.0
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 6.8e-40 167.5 138 60.9
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 6.8e-40 167.5 133 65.4
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 8.9e-40 167.2 140 59.3
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 1.2e-39 166.8 130 64.6
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 1.5e-39 166.4 138 59.4
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.5e-39 166.4 116 72.4
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 3.4e-39 165.2 133 60.2
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 1.3e-38 163.3 110 70.9
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 2.9e-38 162.2 139 59.7
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 5.4e-37 157.9 136 58.1
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 7.8e-36 154.1 135 58.5
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.0e-35 153.7 109 67.0
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 1.1e-34 150.2 109 65.1
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 6.9e-32 141.0 117 53.0
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 6.9e-32 141.0 119 52.9
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 2.6e-31 139.0 95 70.5
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 3.4e-31 138.7 121 50.4
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 7.6e-31 137.5 121 52.1
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 4.2e-29 131.7 92 67.4
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 2.7e-28 129.0 119 48.7
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 3.5e-28 128.6 130 46.2
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 6.6e-27 124.4 107 56.1
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 6.6e-27 124.4 123 46.3
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 8.7e-27 124.0 86 68.6
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.6e-25 118.6 109 55.0
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 9.9e-23 110.5 85 61.2
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 2.1e-20 102.8 90 58.9
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 1.9e-18 96.3 94 52.1
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.7e-12 75.9 52 63.5
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 1.5e-07 60.1 39 69.2


User provided reference genes

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