Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 3.2e-105 385.2 205 100.0
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 1.4e-49 200.3 195 59.5
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 7.2e-49 198.0 195 59.0
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 7.9e-48 194.5 194 58.8
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 1.1e-46 190.7 197 60.9
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 5.7e-46 188.3 196 54.1
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 1.1e-44 184.1 195 62.6
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 2.4e-44 183.0 196 60.2
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 9.1e-44 181.0 192 58.9
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 4.5e-43 178.7 191 51.3
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 1.0e-42 177.6 194 59.3
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 1.7e-42 176.8 192 56.8
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 3.8e-42 175.6 198 59.6
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 8.5e-42 174.5 193 54.9
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.1e-41 174.1 194 55.2
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 7.2e-41 171.4 196 48.5
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 1.2e-40 170.6 190 51.1
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 1.8e-39 166.8 192 58.3
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 5.2e-39 165.2 203 55.7
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 1.1e-38 164.1 190 49.5
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 5.7e-38 161.8 188 51.1
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 9.7e-38 161.0 193 45.6
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 8.2e-37 157.9 192 51.0
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 1.4e-36 157.1 202 45.5
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 1.4e-36 157.1 189 49.2
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 3.1e-36 156.0 197 50.8
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 7.0e-36 154.8 192 57.8
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 9.1e-36 154.5 171 46.8
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 1.6e-35 153.7 187 60.4
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 2.6e-35 152.9 185 56.2
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 5.9e-35 151.8 187 57.8
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 7.7e-35 151.4 165 51.5
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 7.7e-35 151.4 192 51.0
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 1.0e-34 151.0 194 45.4
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.0e-34 151.0 193 51.3
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.7e-34 150.2 170 53.5
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 2.2e-34 149.8 209 39.7
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 6.5e-34 148.3 163 52.8
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 1.1e-33 147.5 206 43.2
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 1.9e-33 146.7 177 53.1
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 4.2e-33 145.6 204 46.1
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 1.6e-32 143.7 200 51.5
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 8.0e-32 141.4 204 45.1
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 6.7e-31 138.3 106 60.4
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 8.8e-31 137.9 106 59.4
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 1.2e-30 137.5 202 49.5
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 1.2e-30 137.5 195 44.6
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 2.0e-30 136.7 154 47.4
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 2.0e-30 136.7 154 47.4
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 2.0e-30 136.7 154 47.4
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 5.7e-30 135.2 158 44.9
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 5.7e-30 135.2 204 48.0
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 9.7e-30 134.4 111 50.5
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 1.7e-29 133.7 152 57.2
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 1.7e-29 133.7 158 49.4
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 2.8e-29 132.9 178 46.1
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 2.8e-29 132.9 208 40.9
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 3.7e-29 132.5 159 45.3
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 6.3e-29 131.7 208 41.8
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 6.3e-29 131.7 198 39.4
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 8.2e-29 131.3 194 39.2
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 1.1e-28 131.0 203 37.4
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 1.4e-28 130.6 191 50.8
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 1.8e-28 130.2 171 53.8
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 1.8e-28 130.2 170 40.6
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 2.4e-28 129.8 158 48.7
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 4.1e-28 129.0 205 36.6
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 4.1e-28 129.0 189 47.1
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 5.3e-28 128.6 202 38.1
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 5.3e-28 128.6 161 54.7
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 1.6e-27 127.1 186 40.3
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 3.5e-27 125.9 160 50.6
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 3.5e-27 125.9 201 41.8
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 3.5e-27 125.9 111 49.5
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 7.7e-27 124.8 171 39.8
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 2.2e-26 123.2 208 40.9
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 2.2e-26 123.2 210 36.2
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 1.5e-25 120.6 132 60.6
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 1.9e-25 120.2 105 50.5
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 3.2e-25 119.4 168 45.8
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 7.2e-25 118.2 135 43.7
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 9.4e-25 117.9 98 53.1
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 1.2e-24 117.5 102 50.0
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.2e-24 117.5 112 47.3
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.2e-24 117.5 112 47.3
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 1.6e-24 117.1 178 39.3
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 4.7e-24 115.5 100 49.0
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 6.1e-24 115.2 106 50.9
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 8.0e-24 114.8 202 35.6
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 1.0e-23 114.4 104 52.9
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 4.0e-23 112.5 103 50.5
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 8.8e-23 111.3 179 38.0
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 1.2e-19 100.9 134 48.5
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 3.5e-19 99.4 105 47.6
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 8.6e-18 94.7 101 43.6
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 3.2e-17 92.8 113 39.8
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 4.7e-16 89.0 115 37.4
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 2.3e-15 86.7 101 38.6
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 3.0e-15 86.3 116 39.7
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 8.8e-15 84.7 198 36.4
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 1.5e-14 84.0 118 40.7
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 2.6e-14 83.2 158 36.1
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 7.5e-14 81.6 91 41.8
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 1.6e-11 73.9 64 51.6
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 4.3e-09 65.9 61 49.2
CiPaw.01G042700 Carya illinoinensis HOM05D007181 ORTHO05D008722 1.6e-08 63.9 106 62.3
ATR0099G072 Amborella trichopoda HOM05D007181 ORTHO05D008722 1.2e-06 57.8 117 43.6
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 2.0e-06 57.0 93 33.3
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 4.4e-06 55.8 51 43.1


User provided reference genes

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