Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 4.2e-81 304.7 157 100.0
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 1.2e-48 196.8 163 69.9
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 1.4e-47 193.4 124 80.6
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 8.8e-47 190.7 161 68.3
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 9.7e-46 187.2 125 79.2
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 3.1e-44 182.2 157 66.2
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 2.6e-43 179.1 157 65.0
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 7.7e-43 177.6 158 64.6
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 1.3e-42 176.8 157 61.8
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 2.9e-42 175.6 157 63.7
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 6.5e-42 174.5 123 72.4
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 1.9e-41 172.9 157 63.7
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 2.5e-41 172.6 160 61.2
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 4.2e-41 171.8 161 61.5
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 4.2e-41 171.8 157 63.1
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 4.2e-41 171.8 162 60.5
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 5.5e-41 171.4 127 70.1
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 5.5e-41 171.4 122 74.6
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 7.2e-41 171.0 157 63.1
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 9.4e-41 170.6 138 64.5
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 1.6e-40 169.9 162 61.1
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 2.1e-40 169.5 159 61.6
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 2.1e-40 169.5 159 56.6
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 2.7e-40 169.1 157 61.8
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 3.6e-40 168.7 157 63.1
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 1.0e-39 167.2 159 61.0
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 1.4e-39 166.8 159 61.0
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 3.9e-39 165.2 109 77.1
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 8.8e-39 164.1 159 60.4
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 1.1e-38 163.7 122 70.5
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 1.1e-38 163.7 159 60.4
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 1.5e-38 163.3 122 69.7
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 2.0e-38 162.9 110 71.8
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 2.6e-38 162.5 162 54.9
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 3.3e-38 162.2 108 72.2
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 3.3e-38 162.2 133 66.9
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 4.4e-38 161.8 106 73.6
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 4.4e-38 161.8 157 56.7
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 4.4e-38 161.8 106 73.6
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 5.7e-38 161.4 108 70.4
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 9.7e-38 160.6 141 63.8
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 1.7e-37 159.8 133 66.2
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 2.8e-37 159.1 99 77.8
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 3.7e-37 158.7 128 67.2
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 4.8e-37 158.3 98 75.5
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 4.8e-37 158.3 133 66.9
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 8.2e-37 157.5 157 56.7
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 1.1e-36 157.1 97 79.4
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 1.4e-36 156.8 160 58.1
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 2.4e-36 156.0 157 54.1
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 4.1e-36 155.2 157 58.0
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 4.1e-36 155.2 158 57.0
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 5.3e-36 154.8 96 76.0
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 7.0e-36 154.5 130 63.1
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 2.0e-35 152.9 128 64.1
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 3.5e-35 152.1 108 71.3
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 5.9e-35 151.4 127 61.4
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 7.7e-35 151.0 125 66.4
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 7.7e-35 151.0 126 65.1
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 7.7e-35 151.0 121 68.6
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 7.7e-35 151.0 106 72.6
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 1.0e-34 150.6 121 62.0
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 1.3e-34 150.2 141 58.2
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 1.7e-34 149.8 158 53.8
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 1.7e-34 149.8 158 53.8
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 1.7e-34 149.8 103 71.8
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 1.7e-34 149.8 108 66.7
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 3.8e-34 148.7 129 60.5
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 3.8e-34 148.7 128 60.9
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 5.0e-34 148.3 94 77.7
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 5.0e-34 148.3 124 62.9
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 1.1e-33 147.1 98 73.5
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 1.1e-33 147.1 125 63.2
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 1.1e-33 147.1 124 62.9
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 1.5e-33 146.7 104 70.2
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 2.5e-33 146.0 94 77.7
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 4.2e-33 145.2 160 50.0
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 7.2e-33 144.4 158 54.4
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 7.2e-33 144.4 97 73.2
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 1.6e-32 143.3 157 52.9
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 1.6e-32 143.3 159 53.5
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 2.7e-32 142.5 158 53.8
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 2.7e-32 142.5 157 51.6
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 4.7e-32 141.7 130 57.7
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 1.0e-31 140.6 124 58.1
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.4e-31 140.2 128 60.2
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 1.4e-31 140.2 112 59.8
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 1.8e-31 139.8 165 49.7
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 4.0e-31 138.7 128 59.4
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 4.0e-31 138.7 97 70.1
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 5.2e-31 138.3 117 62.4
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 6.7e-31 137.9 97 69.1
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 8.8e-31 137.5 132 54.5
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 1.5e-30 136.7 106 66.0
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 2.0e-30 136.3 132 54.5
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 5.7e-30 134.8 114 59.6
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 9.7e-30 134.0 96 67.7
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 1.7e-29 133.3 132 53.0
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 1.7e-29 133.3 155 51.6
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 3.7e-29 132.1 109 55.0
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 4.1e-28 128.6 161 52.2
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 7.0e-28 127.9 196 41.8
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 7.0e-28 127.9 176 44.3
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 3.5e-27 125.6 96 64.6
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 2.9e-26 122.5 86 72.1
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 5.0e-26 121.7 210 40.0
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 2.7e-24 115.9 74 74.3
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 1.4e-23 113.6 98 61.2
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 4.0e-23 112.1 112 51.8
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 2.0e-22 109.8 123 54.5
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 7.0e-20 101.3 60 78.3
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 5.9e-19 98.2 103 43.7
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 2.3e-18 96.3 101 47.5
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 1.1e-17 94.0 55 83.6
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 1.9e-17 93.2 54 81.5
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 2.5e-17 92.8 109 56.0
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 3.6e-16 89.0 96 46.9
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 1.4e-15 87.0 87 46.0
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 7.8e-11 71.2 46 69.6
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 1.3e-10 70.5 95 40.0
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 5.8e-06 55.1 95 29.5


User provided reference genes

Program Settings