Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p040680 Quercus lobata HOM05D006480 ORTHO05D008072 2.8e-67 258.5 128 100.0
Eucgr.F02200 Eucalyptus grandis HOM05D006480 ORTHO05D008072 5.7e-52 207.6 112 91.1
Ciclev10002836m.g Citrus clementina HOM05D006480 ORTHO05D008072 7.4e-52 207.2 107 94.4
Cc10_g07920 Coffea canephora HOM05D006480 ORTHO05D008072 9.6e-52 206.8 107 93.5
Cpa.g.sc160.14 Carica papaya HOM05D006480 ORTHO05D008072 1.6e-51 206.1 112 90.2
MELO3C003481.2 Cucumis melo HOM05D006480 ORTHO05D008072 1.6e-51 206.1 109 91.7
Duzib116G0020 Durio zibethinus HOM05D006480 ORTHO05D008072 1.6e-51 206.1 107 92.5
Duzib116G0295 Durio zibethinus HOM05D006480 ORTHO05D008072 1.6e-51 206.1 107 92.5
Duzib093G0124 Durio zibethinus HOM05D006480 ORTHO05D008072 2.1e-51 205.7 107 90.7
Hma1.2p1_1068F.1_g253990 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 2.8e-51 205.3 107 94.4
Sabra02G0089000 Salix brachista HOM05D006480 ORTHO05D008072 2.8e-51 205.3 108 92.6
Aqoxy6G01530 Aquilegia oxysepala HOM05D006480 ORTHO05D008072 4.8e-51 204.5 107 91.6
CiPaw.15G154000 Carya illinoinensis HOM05D006480 ORTHO05D008072 4.8e-51 204.5 107 93.5
CsaV3_3G048380 Cucumis sativus L. HOM05D006480 ORTHO05D008072 4.8e-51 204.5 107 92.5
Gorai.010G029400 Gossypium raimondii HOM05D006480 ORTHO05D008072 4.8e-51 204.5 109 89.0
Thecc.08G081100 Theobroma cacao HOM05D006480 ORTHO05D008072 4.8e-51 204.5 107 91.6
Nn5g30706 Nelumbo nucifera HOM05D006480 ORTHO05D008072 6.2e-51 204.1 107 90.7
Potri.002G112700 Populus trichocarpa HOM05D006480 ORTHO05D008072 6.2e-51 204.1 112 90.2
Rhsim07G0215700 Rhododendron simsii HOM05D006480 ORTHO05D008072 6.2e-51 204.1 109 90.8
TWI56G0589 Tripterygium wilfordii HOM05D006480 ORTHO05D008072 6.2e-51 204.1 112 87.5
Actinidia10245 Actinidia chinensis HOM05D006480 ORTHO05D008072 8.2e-51 203.8 107 92.5
Gohir.A05G213700 Gossypium hirsutum HOM05D006480 ORTHO05D008072 8.2e-51 203.8 107 91.6
Gohir.A06G027600 Gossypium hirsutum HOM05D006480 ORTHO05D008072 8.2e-51 203.8 107 90.7
Gohir.D06G025000 Gossypium hirsutum HOM05D006480 ORTHO05D008072 8.2e-51 203.8 107 90.7
MSTRG.25010 Avicennia marina HOM05D006480 ORTHO05D008072 1.1e-50 203.4 107 90.7
vmacro21395 Vaccinium macrocarpon HOM05D006480 ORTHO05D008072 1.1e-50 203.4 107 92.5
Gohir.D05G217100 Gossypium hirsutum HOM05D006480 ORTHO05D008072 2.4e-50 202.2 107 90.7
Manes.18G039100 Manihot esculenta HOM05D006480 ORTHO05D008072 2.4e-50 202.2 112 88.4
ClCG11G014970 Citrullus lanatus HOM05D006480 ORTHO05D008072 3.1e-50 201.8 109 90.8
Oeu000749.3 Olea europaea HOM05D006480 ORTHO05D008072 3.1e-50 201.8 107 91.6
Glyma.06G089400 Glycine max HOM05D006480 ORTHO05D008072 5.3e-50 201.1 112 86.6
Dinv01222 Davidia involucrata HOM05D006480 ORTHO05D008072 6.9e-50 200.7 107 91.6
MBI16_g24165_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 1.2e-49 199.9 107 88.8
Sc15g0005270 Simmondsia chinensis HOM05D006480 ORTHO05D008072 1.5e-49 199.5 107 89.7
Glyma.04G087700 Glycine max HOM05D006480 ORTHO05D008072 2.0e-49 199.1 107 88.8
Sed0011969 Sechium edule HOM05D006480 ORTHO05D008072 2.0e-49 199.1 107 89.7
Lalb_Chr11g0064651 Lupinus albus HOM05D006480 ORTHO05D008072 2.6e-49 198.7 112 85.7
Hund05252 Selenicereus undatus HOM05D006480 ORTHO05D008072 3.4e-49 198.4 126 79.4
PGR031G1285 Punica granatum HOM05D006480 ORTHO05D008072 5.8e-49 197.6 107 88.8
Os12g0633200 Oryza sativa ssp. japonica HOM05D006480 ORTHO05D008072 7.6e-49 197.2 112 85.7
Atru.chr13.908 Acer truncatum HOM05D006480 ORTHO05D008072 1.0e-48 196.8 109 88.1
Ah.05g166870 Amaranthus hybridus HOM05D006480 ORTHO05D008072 1.0e-48 196.8 107 87.9
FAN24G1468 Fragaria x ananassa HOM05D006480 ORTHO05D008072 1.3e-48 196.4 110 86.4
MBI16_g31814_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 1.3e-48 196.4 107 87.9
Medtr3g110600 Medicago truncatula HOM05D006480 ORTHO05D008072 1.3e-48 196.4 112 83.9
Prupe.8G152200 Prunus persica HOM05D006480 ORTHO05D008072 1.3e-48 196.4 107 87.9
SalBow7G2271 Salvia bowleyana HOM05D006480 ORTHO05D008072 1.3e-48 196.4 115 81.7
HanXRQChr10g0293651 Helianthus annuus HOM05D006480 ORTHO05D008072 1.7e-48 196.1 112 84.8
Lsat_1_v5_gn_5_111841 Lactuca sativa HOM05D006480 ORTHO05D008072 1.7e-48 196.1 112 83.9
VMungo1309G2678 Vigna mungo HOM05D006480 ORTHO05D008072 1.7e-48 196.1 107 87.9
Dinv16062 Davidia involucrata HOM05D006480 ORTHO05D008072 2.2e-48 195.7 107 88.8
FvH4_2g03000 Fragaria vesca HOM05D006480 ORTHO05D008072 2.2e-48 195.7 107 87.9
FAN15G0464 Fragaria x ananassa HOM05D006480 ORTHO05D008072 2.2e-48 195.7 107 87.9
Manes.05G185600 Manihot esculenta HOM05D006480 ORTHO05D008072 2.9e-48 195.3 112 84.8
Psat5g019760 Pisum sativum HOM05D006480 ORTHO05D008072 3.8e-48 194.9 107 85.0
Migut.N02813 Erythranthe guttata HOM05D006480 ORTHO05D008072 5.0e-48 194.5 124 79.0
FAN27G3220 Fragaria x ananassa HOM05D006480 ORTHO05D008072 5.0e-48 194.5 107 86.9
TPR.G12422 Trifolium pratense HOM05D006480 ORTHO05D008072 6.5e-48 194.1 112 82.1
Phvul.009G113300 Phaseolus vulgaris HOM05D006480 ORTHO05D008072 8.4e-48 193.7 107 86.0
SGA_v2.0_scaffold152G36869 Striga asiatica HOM05D006480 ORTHO05D008072 8.4e-48 193.7 124 79.0
GSVIVG01009268001 Vitis vinifera HOM05D006480 ORTHO05D008072 8.4e-48 193.7 112 85.7
Zm00001eb032930 Zea mays HOM05D006480 ORTHO05D008072 8.4e-48 193.7 104 90.4
Zm00001eb282130 Zea mays HOM05D006480 ORTHO05D008072 1.1e-47 193.4 104 89.4
PGSC0003DMG400004956 Solanum tuberosum HOM05D006480 ORTHO05D008072 1.4e-47 193.0 112 83.9
AL1G20730 Arabidopsis lyrata HOM05D006480 ORTHO05D008072 2.5e-47 192.2 112 84.8
CAN.G416.48 Capsicum annuum HOM05D006480 ORTHO05D008072 2.5e-47 192.2 112 84.8
RcHm_v2.0_Chr6g0247791 Rosa chinensis HOM05D006480 ORTHO05D008072 2.5e-47 192.2 107 86.0
Solyc04g077150.3 Solanum lycopersicum HOM05D006480 ORTHO05D008072 2.5e-47 192.2 112 83.9
Sopen04g030760 Solanum pennellii HOM05D006480 ORTHO05D008072 2.5e-47 192.2 112 83.9
HPP92_019513 Vanilla planifolia HOM05D006480 ORTHO05D008072 2.5e-47 192.2 112 83.0
C08p13360 Brassica napus HOM05D006480 ORTHO05D008072 3.2e-47 191.8 112 83.9
BolC8t48966H Brassica oleracea HOM05D006480 ORTHO05D008072 3.2e-47 191.8 113 83.2
Ca_30083_v3 Cicer arietinum L. HOM05D006480 ORTHO05D008072 3.2e-47 191.8 112 81.2
THA.LOC104816778 Tarenaya hassleriana HOM05D006480 ORTHO05D008072 4.2e-47 191.4 107 86.9
AT1G10030 Arabidopsis thaliana HOM05D006480 ORTHO05D008072 5.5e-47 191.0 112 83.9
ECA234G4602 Erigeron canadensis HOM05D006480 ORTHO05D008072 5.5e-47 191.0 112 83.0
FAN20G1015 Fragaria x ananassa HOM05D006480 ORTHO05D008072 5.5e-47 191.0 107 86.0
MD05G1108500 Malus domestica HOM05D006480 ORTHO05D008072 5.5e-47 191.0 107 85.0
Psat0s2525g0120 Pisum sativum HOM05D006480 ORTHO05D008072 5.5e-47 191.0 112 80.4
Hma1.2p1_2654F.1_g326220 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 1.2e-46 189.9 107 86.0
Lj1g0003564 Lotus japonicus HOM05D006480 ORTHO05D008072 1.2e-46 189.9 112 81.2
Nitab4.5_0001614g0080 Nicotiana tabacum HOM05D006480 ORTHO05D008072 1.2e-46 189.9 112 83.0
BcaC07g38564 Brassica carinata HOM05D006480 ORTHO05D008072 2.1e-46 189.1 112 83.0
BolC5t29573H Brassica oleracea HOM05D006480 ORTHO05D008072 2.1e-46 189.1 109 83.5
Thhalv10009099m.g Eutrema salsugineum HOM05D006480 ORTHO05D008072 2.1e-46 189.1 112 83.0
BcaC05g24814 Brassica carinata HOM05D006480 ORTHO05D008072 2.7e-46 188.7 112 82.1
BcaC05g24816 Brassica carinata HOM05D006480 ORTHO05D008072 2.7e-46 188.7 112 82.1
A06p06730 Brassica napus HOM05D006480 ORTHO05D008072 2.7e-46 188.7 112 82.1
A08p34230 Brassica napus HOM05D006480 ORTHO05D008072 2.7e-46 188.7 112 83.0
C05p08210 Brassica napus HOM05D006480 ORTHO05D008072 2.7e-46 188.7 112 82.1
BraA08t35335Z Brassica rapa HOM05D006480 ORTHO05D008072 2.7e-46 188.7 112 83.0
CANSAT25G0792 Cannabis sativa HOM05D006480 ORTHO05D008072 2.7e-46 188.7 112 82.1
Carub.0001s0945 Capsella rubella HOM05D006480 ORTHO05D008072 6.1e-46 187.6 112 83.0
CARHR010140 Cardamine hirsuta HOM05D006480 ORTHO05D008072 7.9e-46 187.2 107 83.2
PSO675G8575 Papaver somniferum HOM05D006480 ORTHO05D008072 1.0e-45 186.8 130 70.0
Peaxi162Scf00628g00517 Petunia axillaris HOM05D006480 ORTHO05D008072 1.8e-45 186.0 112 81.2
Lj5A222T80 Lonicera japonica HOM05D006480 ORTHO05D008072 3.0e-45 185.3 109 83.5
PSO541G2150 Papaver somniferum HOM05D006480 ORTHO05D008072 3.0e-45 185.3 112 78.6
Gorai.009G223900 Gossypium raimondii HOM05D006480 ORTHO05D008072 3.9e-45 184.9 99 90.9
Aa31LG1G4870 Aethionema arabicum HOM05D006480 ORTHO05D008072 6.7e-45 184.1 107 84.1
Sp1g08680 Schrenkiella parvula HOM05D006480 ORTHO05D008072 6.7e-45 184.1 107 83.2
EL10Ac1g02330 Beta vulgaris HOM05D006480 ORTHO05D008072 1.9e-44 182.6 107 80.4
arahy.Tifrunner.gnm1.ann1.27XHB7 Arachis hypogaea HOM05D006480 ORTHO05D008072 5.7e-44 181.0 107 78.5
arahy.Tifrunner.gnm1.ann1.2A26X2 Arachis hypogaea HOM05D006480 ORTHO05D008072 5.7e-44 181.0 107 78.5
Dinv09524 Davidia involucrata HOM05D006480 ORTHO05D008072 2.4e-42 175.6 99 87.9
BraA06t23887Z Brassica rapa HOM05D006480 ORTHO05D008072 1.7e-40 169.5 147 61.9
SMO112G0018 Selaginella moellendorffii HOM05D006480 ORTHO05D008072 2.5e-39 165.6 112 70.5
MD10G1112500 Malus domestica HOM05D006480 ORTHO05D008072 4.2e-39 164.9 110 73.6
Nitab4.5_0002415g0030 Nicotiana tabacum HOM05D006480 ORTHO05D008072 7.2e-39 164.1 92 85.9
Mapoly0019s0092 Marchantia polymorpha HOM05D006480 ORTHO05D008072 1.2e-38 163.3 107 71.0
Thecc.02G032200 Theobroma cacao HOM05D006480 ORTHO05D008072 3.3e-36 155.2 107 69.2
AagrBONN_evm.TU.Sc2ySwM_228.4946 Anthoceros agrestis HOM05D006480 ORTHO05D008072 7.9e-30 134.0 109 57.8
CARHR010030 Cardamine hirsuta HOM05D006480 ORTHO05D008072 3.1e-26 122.1 74 77.0
Duzib041G0452 Durio zibethinus HOM05D006480 ORTHO05D008072 7.0e-26 120.9 77 75.3
Zm00001eb129210 Zea mays HOM05D006480 ORTHO05D008072 7.7e-25 117.5 100 58.0
Zm00001eb129300 Zea mays HOM05D006480 ORTHO05D008072 1.7e-24 116.3 127 51.2
Zm00001eb116080 Zea mays HOM05D006480 ORTHO05D008072 2.2e-24 115.9 117 53.0
Zm00001eb116100 Zea mays HOM05D006480 ORTHO05D008072 2.2e-24 115.9 117 53.0
Zm00001eb129140 Zea mays HOM05D006480 ORTHO05D008072 4.2e-23 111.7 127 50.4
CBR_g29820 Chara braunii HOM05D006480 ORTHO05D008072 3.7e-19 98.6 109 42.2
CBR_g8921 Chara braunii HOM05D001598 ORTHO05D002757 3.7e-19 98.6 109 44.0
Zm00001eb409710 Zea mays HOM05D006480 ORTHO05D008072 4.8e-19 98.2 109 46.8
Pp3c19_15780 Physcomitrium patens HOM05D006480 ORTHO05D008072 1.0e-16 90.5 73 58.9


User provided reference genes

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