Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 2.8e-79 298.5 147 100.0
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 8.8e-41 170.6 150 62.7
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 1.1e-40 170.2 150 66.7
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 4.7e-34 148.3 147 59.9
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 4.0e-33 145.2 160 55.0
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 2.6e-32 142.5 137 56.2
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 9.7e-32 140.6 147 57.1
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 2.8e-31 139.0 148 54.7
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 3.7e-31 138.7 147 55.8
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 4.8e-31 138.3 149 55.0
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 4.8e-31 138.3 148 53.4
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 4.8e-31 138.3 148 54.7
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 6.3e-31 137.9 146 54.8
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 6.3e-31 137.9 146 53.4
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 1.1e-30 137.1 149 57.0
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 1.1e-30 137.1 150 54.7
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 1.4e-30 136.7 151 55.0
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 2.4e-30 136.0 148 56.8
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 2.4e-30 136.0 148 57.4
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 5.3e-30 134.8 150 54.7
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 9.1e-30 134.0 148 54.1
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 1.2e-29 133.7 152 53.9
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 1.2e-29 133.7 149 53.0
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.6e-29 133.3 152 54.6
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 1.6e-29 133.3 142 53.5
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 2.0e-29 132.9 152 53.9
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 2.0e-29 132.9 152 53.9
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 3.5e-29 132.1 152 53.3
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 3.5e-29 132.1 148 54.1
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 5.9e-29 131.3 148 53.4
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 5.9e-29 131.3 151 53.6
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 7.7e-29 131.0 148 53.4
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 7.7e-29 131.0 147 54.4
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 7.7e-29 131.0 148 54.1
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 1.0e-28 130.6 150 53.3
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 1.0e-28 130.6 147 53.1
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 1.3e-28 130.2 145 51.0
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 1.7e-28 129.8 148 53.4
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 1.7e-28 129.8 146 50.7
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 3.8e-28 128.6 147 51.0
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 5.0e-28 128.3 110 62.7
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 5.0e-28 128.3 145 51.0
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 6.5e-28 127.9 146 54.1
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 6.5e-28 127.9 148 54.1
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 8.5e-28 127.5 149 53.0
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 1.1e-27 127.1 120 59.2
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 1.5e-27 126.7 112 60.7
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 2.5e-27 125.9 110 62.7
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 3.2e-27 125.6 156 50.0
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 5.5e-27 124.8 152 49.3
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 7.2e-27 124.4 149 51.7
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 7.2e-27 124.4 147 52.4
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 7.2e-27 124.4 145 50.3
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 1.2e-26 123.6 138 52.2
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 1.2e-26 123.6 148 52.7
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 1.6e-26 123.2 149 49.7
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 3.6e-26 122.1 149 51.0
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 4.7e-26 121.7 121 52.9
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 4.7e-26 121.7 128 57.8
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 6.1e-26 121.3 108 60.2
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 6.1e-26 121.3 106 63.2
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 1.4e-25 120.2 107 61.7
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 1.8e-25 119.8 147 51.0
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 1.8e-25 119.8 107 61.7
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 1.8e-25 119.8 107 61.7
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 3.0e-25 119.0 111 61.3
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 4.0e-25 118.6 108 60.2
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 4.0e-25 118.6 107 61.7
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 5.2e-25 118.2 105 60.0
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 6.8e-25 117.9 116 55.2
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 6.8e-25 117.9 142 50.0
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 6.8e-25 117.9 106 61.3
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 8.8e-25 117.5 108 59.3
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 1.5e-24 116.7 149 49.7
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 1.5e-24 116.7 105 60.0
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 1.5e-24 116.7 112 58.0
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 1.5e-24 116.7 138 50.7
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 2.0e-24 116.3 107 59.8
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 2.6e-24 115.9 104 60.6
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 3.4e-24 115.5 149 49.7
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 5.7e-24 114.8 149 49.7
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 5.7e-24 114.8 149 49.7
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 5.7e-24 114.8 149 49.7
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 7.5e-24 114.4 111 55.9
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 9.8e-24 114.0 120 53.3
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 1.3e-23 113.6 111 55.9
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 3.7e-23 112.1 98 70.4
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 4.8e-23 111.7 104 57.7
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 1.1e-22 110.5 101 59.4
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 1.4e-22 110.2 104 58.7
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 1.4e-22 110.2 104 57.7
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 1.8e-22 109.8 105 56.2
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 2.4e-22 109.4 147 44.2
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 2.4e-22 109.4 146 45.2
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 4.1e-22 108.6 144 45.8
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 2.0e-21 106.3 106 53.8
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 2.7e-21 105.9 112 51.8
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 7.7e-21 104.4 92 57.6
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 1.3e-20 103.6 112 51.8
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 2.8e-18 95.9 119 47.9
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 1.8e-17 93.2 119 42.0
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 1.2e-16 90.5 97 50.5
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 1.5e-16 90.1 113 42.5
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 9.8e-16 87.4 104 48.1
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 2.4e-14 82.8 88 61.4
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 1.0e-12 77.4 97 52.6
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 1.0e-12 77.4 87 54.0
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 6.6e-12 74.7 93 54.8
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 3.4e-08 62.4 27 96.3
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 4.4e-08 62.0 90 36.7
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 7.5e-08 61.2 87 49.4


User provided reference genes

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