Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 2.8e-61 238.8 154 100.0
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 3.4e-19 99.0 102 58.8
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 5.8e-19 98.2 111 54.1
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 2.2e-18 96.3 106 56.6
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 8.4e-18 94.4 102 55.9
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 1.9e-17 93.2 102 55.9
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 4.2e-17 92.0 102 58.8
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 9.3e-17 90.9 102 53.9
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 2.1e-16 89.7 102 54.9
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.7e-15 86.7 102 52.9
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 2.3e-15 86.3 102 53.9
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 3.0e-15 85.9 102 52.0
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 6.6e-15 84.7 102 55.9
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.9e-14 83.2 103 54.4
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 1.9e-14 83.2 103 54.4
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 2.5e-14 82.8 102 52.9
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 2.5e-14 82.8 102 52.0
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 3.3e-14 82.4 102 53.9
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 4.3e-14 82.0 104 54.8
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 1.6e-13 80.1 102 52.0
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 1.6e-13 80.1 100 52.0
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 2.1e-13 79.7 102 47.1
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 4.8e-13 78.6 103 51.5
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 4.8e-13 78.6 102 50.0
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 4.8e-13 78.6 101 55.4
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 6.2e-13 78.2 123 47.2
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 6.2e-13 78.2 123 47.2
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 8.1e-13 77.8 109 48.6
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 8.1e-13 77.8 109 48.6
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 8.1e-13 77.8 102 51.0
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 1.1e-12 77.4 102 49.0
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 1.4e-12 77.0 102 48.0
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 2.4e-12 76.3 103 50.5
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 2.4e-12 76.3 100 50.0
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 4.0e-12 75.5 60 81.7
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 4.0e-12 75.5 98 50.0
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 5.3e-12 75.1 59 78.0
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 5.3e-12 75.1 59 74.6
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 9.0e-12 74.3 102 50.0
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 9.0e-12 74.3 102 47.1
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 1.2e-11 73.9 61 77.0
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.2e-11 73.9 116 45.7
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 1.2e-11 73.9 100 48.0
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 1.5e-11 73.6 102 47.1
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 1.5e-11 73.6 100 47.0
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 2.0e-11 73.2 102 47.1
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 2.6e-11 72.8 102 47.1
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 2.6e-11 72.8 102 46.1
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 5.8e-11 71.6 57 73.7
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 5.8e-11 71.6 57 73.7
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 1.7e-10 70.1 115 42.6
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 2.9e-10 69.3 100 44.0
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 4.9e-10 68.6 59 67.8
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 1.1e-09 67.4 120 43.3
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 1.9e-09 66.6 100 44.0
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 1.9e-09 66.6 100 44.0
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 3.2e-09 65.9 102 43.1
FAN15G2183 Fragaria x ananassa HOM05D007769 ORTHO05D009588 3.2e-09 65.9 104 51.0
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 4.2e-09 65.5 101 45.5
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 2.1e-08 63.2 102 43.1
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 2.7e-08 62.8 58 63.8
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 4.6e-08 62.0 102 43.1
CANSAT78G2421 Cannabis sativa HOM05D007769 ORTHO05D009588 6.0e-08 61.6 48 68.8
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 6.0e-08 61.6 102 42.2
FAN27G1659 Fragaria x ananassa HOM05D007769 ORTHO05D009588 7.9e-08 61.2 102 49.0
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 1.3e-07 60.5 102 42.2
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 1.8e-07 60.1 59 64.4
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 1.8e-07 60.1 102 47.1
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 1.8e-07 60.1 102 41.2
CANSAT25G3084 Cannabis sativa HOM05D007769 ORTHO05D009588 2.3e-07 59.7 48 75.0
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 3.9e-07 58.9 102 42.2
Hma1.2p1_0819F.1_g223670 Hydrangea macrophylla HOM05D007769 ORTHO05D009588 5.1e-07 58.5 102 46.1
vmacro22052 Vaccinium macrocarpon HOM05D007769 ORTHO05D009588 1.1e-06 57.4 67 47.8
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 1.9e-06 56.6 57 64.9
Phvul.001G027900 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 2.5e-06 56.2 57 59.6
HPP92_006078 Vanilla planifolia HOM05D007769 ORTHO05D009588 2.5e-06 56.2 56 60.7


User provided reference genes

Program Settings