Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p036407 Quercus lobata HOM05D003923 ORTHO05D004553 6.7e-180 634.0 350 100.0
CiPaw.07G181200 Carya illinoinensis HOM05D003923 ORTHO05D004553 6.6e-119 431.4 352 74.1
Cfa013623 Carpinus fangiana HOM05D003923 ORTHO05D004553 7.0e-113 411.4 355 69.6
Haze_22250 Corylus avellana HOM05D003923 ORTHO05D004553 2.3e-111 406.4 357 71.4
Gohir.A05G227800 Gossypium hirsutum HOM05D003923 ORTHO05D004553 4.7e-109 398.7 355 68.7
CiPaw.08G044000 Carya illinoinensis HOM05D003923 ORTHO05D004553 8.1e-109 397.9 359 69.6
Gorai.009G238400 Gossypium raimondii HOM05D003923 ORTHO05D004553 1.7e-106 390.2 354 66.9
Gohir.D05G230200 Gossypium hirsutum HOM05D003923 ORTHO05D004553 3.7e-106 389.0 351 67.0
FAN04G1592 Fragaria x ananassa HOM05D003923 ORTHO05D004553 1.0e-103 380.9 362 65.2
FvH4_5g37730 Fragaria vesca HOM05D003923 ORTHO05D004553 2.3e-103 379.8 363 64.5
FAN18G1313 Fragaria x ananassa HOM05D003923 ORTHO05D004553 3.9e-103 379.0 363 62.8
Duzib041G0577 Durio zibethinus HOM05D003923 ORTHO05D004553 5.1e-103 378.6 350 66.0
FAN08G0462 Fragaria x ananassa HOM05D003923 ORTHO05D004553 5.1e-103 378.6 362 63.5
FAN13G1718 Fragaria x ananassa HOM05D003923 ORTHO05D004553 5.1e-103 378.6 362 60.8
Manes.18G068600 Manihot esculenta HOM05D003923 ORTHO05D004553 1.1e-102 377.5 365 65.2
MD15G1366500 Malus domestica HOM05D003923 ORTHO05D004553 9.5e-102 374.4 381 62.5
RcHm_v2.0_Chr7g0239471 Rosa chinensis HOM05D003923 ORTHO05D004553 1.6e-101 373.6 364 64.3
Potri.002G094700 Populus trichocarpa HOM05D003923 ORTHO05D004553 4.7e-101 372.1 359 65.2
Thecc.08G109100 Theobroma cacao HOM05D003923 ORTHO05D004553 1.1e-100 370.9 350 68.0
MD08G1180900 Malus domestica HOM05D003923 ORTHO05D004553 5.2e-100 368.6 370 65.1
Lalb_Chr08g0241981 Lupinus albus HOM05D003923 ORTHO05D004553 2.6e-99 366.3 366 62.0
TWI56G0888 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 3.4e-99 365.9 362 65.5
Sabra05G0125400 Salix brachista HOM05D003923 ORTHO05D004553 4.4e-99 365.5 356 64.0
Prupe.1G514400 Prunus persica HOM05D003923 ORTHO05D004553 2.2e-98 363.2 371 66.0
TWI12G0076 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 4.9e-98 362.1 360 64.7
CSS0021337 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 1.4e-97 360.5 353 64.0
Duzib093G1759 Durio zibethinus HOM05D003923 ORTHO05D004553 4.2e-97 359.0 363 64.7
Potri.005G166400 Populus trichocarpa HOM05D003923 ORTHO05D004553 7.1e-97 358.2 353 62.6
CSS0001866 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 1.2e-96 357.5 353 62.9
Cpa.g.sc36.119 Carica papaya HOM05D003923 ORTHO05D004553 1.6e-96 357.1 358 61.2
Ciclev10001646m.g Citrus clementina HOM05D003923 ORTHO05D004553 9.6e-94 347.8 361 62.9
COL.COLO4_16427 Corchorus olitorius HOM05D003923 ORTHO05D004553 9.6e-94 347.8 339 67.0
Hma1.2p1_0120F.1_g057290 Hydrangea macrophylla HOM05D003923 ORTHO05D004553 3.6e-93 345.9 350 64.0
Lalb_Chr11g0065491 Lupinus albus HOM05D003923 ORTHO05D004553 3.6e-93 345.9 376 55.6
Lj1g0006284 Lotus japonicus HOM05D003923 ORTHO05D004553 6.2e-93 345.1 363 57.6
Gohir.D06G037500 Gossypium hirsutum HOM05D003923 ORTHO05D004553 2.4e-92 343.2 352 60.5
Gohir.A06G036700 Gossypium hirsutum HOM05D003923 ORTHO05D004553 2.0e-91 340.1 354 58.5
Gorai.010G042400 Gossypium raimondii HOM05D003923 ORTHO05D004553 3.4e-91 339.3 352 59.9
Rhsim06G0083500 Rhododendron simsii HOM05D003923 ORTHO05D004553 1.3e-90 337.4 371 56.3
Phvul.009G029900 Phaseolus vulgaris HOM05D003923 ORTHO05D004553 1.1e-89 334.3 356 59.3
Medtr3g074210 Medicago truncatula HOM05D003923 ORTHO05D004553 1.4e-89 334.0 367 58.0
Nn5g29082 Nelumbo nucifera HOM05D003923 ORTHO05D004553 1.4e-89 334.0 359 58.2
CANSAT25G0676 Cannabis sativa HOM05D003923 ORTHO05D004553 7.1e-89 331.6 364 62.1
Cc10_g07380 Coffea canephora HOM05D003923 ORTHO05D004553 1.2e-88 330.9 372 60.8
Oeu024542.1 Olea europaea HOM05D003923 ORTHO05D004553 2.1e-88 330.1 356 58.7
TPR.G35206 Trifolium pratense HOM05D003923 ORTHO05D004553 7.8e-88 328.2 362 61.9
TAR628G1119 Trochodendron aralioides HOM05D003923 ORTHO05D004553 7.8e-88 328.2 354 60.2
Oeu061492.1 Olea europaea HOM05D003923 ORTHO05D004553 2.3e-87 326.6 362 59.4
Psat5g138360 Pisum sativum HOM05D003923 ORTHO05D004553 8.7e-87 324.7 368 57.1
Peaxi162Scf00041g01015 Petunia axillaris HOM05D003923 ORTHO05D004553 3.3e-86 322.8 363 57.9
Glyma.06G104700 Glycine max HOM05D003923 ORTHO05D004553 4.0e-84 315.8 364 61.0
Sabra02G0074700 Salix brachista HOM05D003923 ORTHO05D004553 6.4e-82 308.5 358 55.9
EL10Ac1g01249 Beta vulgaris HOM05D003923 ORTHO05D004553 8.7e-79 298.1 372 49.5
Manes.02G153800 Manihot esculenta HOM05D003923 ORTHO05D004553 2.5e-78 296.6 356 57.6
Ca_15243_v3 Cicer arietinum L. HOM05D003923 ORTHO05D004553 5.6e-78 295.4 369 57.7
MSTRG.24466 Avicennia marina HOM05D003923 ORTHO05D004553 9.6e-78 294.7 368 52.2
CAN.G1261.5 Capsicum annuum HOM05D003923 ORTHO05D004553 1.6e-77 293.9 364 52.2
Duzib116G0286 Durio zibethinus HOM05D003923 ORTHO05D004553 3.7e-77 292.7 276 62.7
Eucgr.F02437 Eucalyptus grandis HOM05D003923 ORTHO05D004553 6.2e-77 292.0 358 53.1
THA.LOC104809709 Tarenaya hassleriana HOM05D003923 ORTHO05D004553 1.2e-75 287.7 375 50.9
Eucgr.F00301 Eucalyptus grandis HOM05D003923 ORTHO05D004553 1.7e-74 283.9 271 61.3
HanXRQChr15g0491381 Helianthus annuus HOM05D003923 ORTHO05D004553 1.7e-74 283.9 360 53.1
BcaB03g15981 Brassica carinata HOM05D003923 ORTHO05D004553 3.8e-74 282.7 345 52.5
ECA232G2894 Erigeron canadensis HOM05D003923 ORTHO05D004553 4.9e-74 282.3 370 51.9
BcaC08g47387 Brassica carinata HOM05D003923 ORTHO05D004553 5.5e-73 278.9 354 52.3
C06p52080 Brassica napus HOM05D003923 ORTHO05D004553 5.5e-73 278.9 354 52.3
BolC6t40231H Brassica oleracea HOM05D003923 ORTHO05D004553 5.5e-73 278.9 354 52.3
Glyma.04G103500 Glycine max HOM05D003923 ORTHO05D004553 5.5e-73 278.9 350 51.7
PSO210G6507 Papaver somniferum HOM05D003923 ORTHO05D004553 7.1e-73 278.5 380 52.9
Lsat_1_v5_gn_9_43840 Lactuca sativa HOM05D003923 ORTHO05D004553 9.3e-73 278.1 354 52.3
Actinidia30763 Actinidia chinensis HOM05D003923 ORTHO05D004553 1.2e-72 277.7 350 52.0
PSO447G0218 Papaver somniferum HOM05D003923 ORTHO05D004553 2.7e-72 276.6 378 52.6
vmacro21241 Vaccinium macrocarpon HOM05D003923 ORTHO05D004553 4.6e-72 275.8 363 50.7
VMungo1309G2192 Vigna mungo HOM05D003923 ORTHO05D004553 1.3e-71 274.2 358 56.1
BcaB05g25102 Brassica carinata HOM05D003923 ORTHO05D004553 5.1e-71 272.3 359 47.1
Aqoxy5G01999 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 8.7e-71 271.6 364 45.3
MELO3C010430.2 Cucumis melo HOM05D003923 ORTHO05D004553 1.1e-70 271.2 345 50.1
Lalb_Chr17g0344141 Lupinus albus HOM05D003923 ORTHO05D004553 9.6e-70 268.1 356 53.4
PGR042G1650 Punica granatum HOM05D003923 ORTHO05D004553 8.2e-69 265.0 354 50.8
ClCG11G015440 Citrullus lanatus HOM05D003923 ORTHO05D004553 4.0e-68 262.7 365 47.4
ECA246G1087 Erigeron canadensis HOM05D003923 ORTHO05D004553 9.0e-68 261.5 355 47.3
CsaV3_4G028650 Cucumis sativus L. HOM05D003923 ORTHO05D004553 1.2e-67 261.2 351 49.3
PGSC0003DMG400009479 Solanum tuberosum HOM05D003923 ORTHO05D004553 1.5e-67 260.8 368 51.4
Peaxi162Scf00160g00147 Petunia axillaris HOM05D003923 ORTHO05D004553 3.4e-67 259.6 354 49.2
Sc23g0000110 Simmondsia chinensis HOM05D003923 ORTHO05D004553 5.8e-67 258.8 353 48.2
MBI02_g08739_MAGBIO Magnolia biondii HOM05D003923 ORTHO05D004553 1.0e-66 258.1 360 47.8
Lalb_Chr04g0253191 Lupinus albus HOM05D003923 ORTHO05D004553 1.3e-66 257.7 338 51.8
Ah.05g170190 Amaranthus hybridus HOM05D003923 ORTHO05D004553 2.2e-66 256.9 368 48.4
PGSC0003DMG400008539 Solanum tuberosum HOM05D003923 ORTHO05D004553 6.5e-66 255.4 356 47.8
Aa31LG4G8160 Aethionema arabicum HOM05D003923 ORTHO05D004553 1.9e-65 253.8 355 49.3
Nitab4.5_0000421g0080 Nicotiana tabacum HOM05D003923 ORTHO05D004553 2.5e-65 253.4 362 46.1
Sopen04g029130 Solanum pennellii HOM05D003923 ORTHO05D004553 4.2e-65 252.7 367 48.0
Solyc12g056990.1 Solanum lycopersicum HOM05D003923 ORTHO05D004553 5.5e-65 252.3 355 47.9
Nitab4.5_0000675g0060 Nicotiana tabacum HOM05D003923 ORTHO05D004553 4.6e-64 249.2 355 50.4
Nitab4.5_0002243g0010 Nicotiana tabacum HOM05D003923 ORTHO05D004553 3.9e-63 246.1 329 47.7
CARHR071570 Cardamine hirsuta HOM05D003923 ORTHO05D004553 5.1e-63 245.7 362 48.6
AL2G38420 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 1.6e-61 240.7 349 49.9
Sp5g33250 Schrenkiella parvula HOM05D003923 ORTHO05D004553 4.8e-61 239.2 363 48.2
A02p22020 Brassica napus HOM05D003923 ORTHO05D004553 6.3e-61 238.8 353 46.5
C02p35410 Brassica napus HOM05D003923 ORTHO05D004553 1.1e-60 238.0 351 46.2
BraA02t07205Z Brassica rapa HOM05D003923 ORTHO05D004553 1.8e-60 237.3 353 46.2
BolC2t09553H Brassica oleracea HOM05D003923 ORTHO05D004553 2.4e-60 236.9 351 45.9
Nitab4.5_0001992g0040 Nicotiana tabacum HOM05D003923 ORTHO05D004553 6.9e-60 235.3 349 47.9
Carub.0002s2500 Capsella rubella HOM05D003923 ORTHO05D004553 9.0e-60 235.0 351 46.7
Sed0005628 Sechium edule HOM05D003923 ORTHO05D004553 9.0e-60 235.0 367 44.4
BcaB02g07147 Brassica carinata HOM05D003923 ORTHO05D004553 1.2e-59 234.6 346 45.1
BcaC03g15795 Brassica carinata HOM05D003923 ORTHO05D004553 2.0e-59 233.8 351 45.3
A07p43360 Brassica napus HOM05D003923 ORTHO05D004553 7.7e-59 231.9 354 44.1
BraA07t31856Z Brassica rapa HOM05D003923 ORTHO05D004553 1.0e-58 231.5 354 44.9
AT1G78110 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 5.0e-58 229.2 346 48.3
AL1G35680 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 1.4e-57 227.6 359 46.2
Aqoxy6G00599 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 2.5e-57 226.9 355 44.2
MSTRG.22149 Avicennia marina HOM05D003923 ORTHO05D004553 3.2e-57 226.5 377 44.3
Migut.N02906 Erythranthe guttata HOM05D003923 ORTHO05D004553 1.6e-56 224.2 375 40.5
Atru.chr13.1213 Acer truncatum HOM05D003923 ORTHO05D004553 6.1e-56 222.2 296 54.1
Carub.0001s2178 Capsella rubella HOM05D003923 ORTHO05D004553 7.9e-56 221.9 356 46.9
Thhalv10018798m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 3.0e-55 219.9 371 45.8
Sp1g19740 Schrenkiella parvula HOM05D003923 ORTHO05D004553 3.0e-55 219.9 351 44.7
Solyc04g072940.4 Solanum lycopersicum HOM05D003923 ORTHO05D004553 3.0e-55 219.9 340 49.4
CsaV3_2G024220 Cucumis sativus L. HOM05D003923 ORTHO05D004553 3.9e-55 219.5 358 46.9
AT1G22230 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 1.5e-54 217.6 355 45.1
Dinv13027 Davidia involucrata HOM05D003923 ORTHO05D004553 2.5e-54 216.9 243 56.8
BraA07t30411Z Brassica rapa HOM05D003923 ORTHO05D004553 7.4e-54 215.3 376 46.0
CARHR022580 Cardamine hirsuta HOM05D003923 ORTHO05D004553 1.7e-53 214.2 372 42.5
Sopen00g003260 Solanum pennellii HOM05D003923 ORTHO05D004553 1.7e-53 214.2 318 45.6
A07p27700 Brassica napus HOM05D003923 ORTHO05D004553 2.8e-53 213.4 375 46.7
MELO3C011359.2 Cucumis melo HOM05D003923 ORTHO05D004553 3.1e-52 209.9 358 45.3
BcaC08g45438 Brassica carinata HOM05D003923 ORTHO05D004553 1.2e-51 208.0 374 47.1
C06p30680 Brassica napus HOM05D003923 ORTHO05D004553 1.2e-51 208.0 374 47.1
BolC6t38232H Brassica oleracea HOM05D003923 ORTHO05D004553 1.2e-51 208.0 374 47.1
A09p42540 Brassica napus HOM05D003923 ORTHO05D004553 4.5e-51 206.1 342 43.0
BraA09t39730Z Brassica rapa HOM05D003923 ORTHO05D004553 2.2e-50 203.8 342 43.3
HanXRQChr05g0162921 Helianthus annuus HOM05D003923 ORTHO05D004553 1.2e-48 198.0 378 40.5
ClCG08G011040 Citrullus lanatus HOM05D003923 ORTHO05D004553 1.6e-48 197.6 358 43.9
Migut.O00455 Erythranthe guttata HOM05D003923 ORTHO05D004553 4.7e-48 196.1 235 49.8
BcaB07g32245 Brassica carinata HOM05D003923 ORTHO05D004553 1.0e-47 194.9 346 42.5
Sed0003612 Sechium edule HOM05D003923 ORTHO05D004553 1.0e-47 194.9 304 41.4
AUR62027732 Chenopodium quinoa HOM05D003923 ORTHO05D004553 8.8e-47 191.8 200 54.5
unitig_21.g20601 Utricularia gibba HOM05D003923 ORTHO05D004553 1.1e-46 191.4 356 41.3
BcaB07g32243 Brassica carinata HOM05D003923 ORTHO05D004553 4.4e-46 189.5 345 39.7
BcaC05g26150 Brassica carinata HOM05D003923 ORTHO05D004553 4.4e-46 189.5 345 39.7
C05p21350 Brassica napus HOM05D003923 ORTHO05D004553 4.4e-46 189.5 345 39.7
BolC5t30833H Brassica oleracea HOM05D003923 ORTHO05D004553 4.4e-46 189.5 340 38.5
Thhalv10008264m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 5.0e-42 176.0 344 37.5
BraA07t29207Z Brassica rapa HOM05D003923 ORTHO05D004553 1.1e-41 174.9 345 40.3
ATR0564G364 Amborella trichopoda HOM05D003923 ORTHO05D004553 5.5e-41 172.6 360 36.7
A07p14630 Brassica napus HOM05D003923 ORTHO05D004553 7.2e-41 172.2 345 40.3
Aa31LG7G6170 Aethionema arabicum HOM05D003923 ORTHO05D004553 2.6e-38 163.7 351 37.0
PSO781G0128 Papaver somniferum HOM05D003923 ORTHO05D004553 5.7e-38 162.5 414 35.3
PSO541G2428 Papaver somniferum HOM05D003923 ORTHO05D004553 8.2e-37 158.7 436 34.2
SalBow7G0529 Salvia bowleyana HOM05D003923 ORTHO05D004553 1.8e-36 157.5 328 43.0
Sed0022190 Sechium edule HOM05D003923 ORTHO05D004553 1.2e-35 154.8 265 41.5
BcaC06g34942 Brassica carinata HOM05D003923 ORTHO05D004553 5.9e-35 152.5 345 37.1
unitig_744.g24093 Utricularia gibba HOM05D003923 ORTHO05D004553 5.9e-35 152.5 363 36.6
Zm00001eb255200 Zea mays HOM05D003923 ORTHO05D004553 1.3e-34 151.4 355 36.1
C07p21520 Brassica napus HOM05D003923 ORTHO05D004553 1.7e-34 151.0 345 36.2
Zm00001eb098670 Zea mays HOM05D003923 ORTHO05D004553 2.9e-34 150.2 378 34.1
Zm00001eb194180 Zea mays HOM05D003923 ORTHO05D004553 3.6e-32 143.3 351 35.0
CDE12G0356 Ceratophyllum demersum HOM05D003923 ORTHO05D004553 3.0e-31 140.2 337 36.2
SEGI_41423 Sequoiadendron giganteum HOM05D003923 ORTHO05D004553 3.4e-30 136.7 343 32.9
Zm00001eb311240 Zea mays HOM05D003923 ORTHO05D004553 2.2e-29 134.0 366 34.4
ATR0122G028 Amborella trichopoda HOM05D003923 ORTHO05D004553 2.5e-25 120.6 340 32.1
HPP92_002331 Vanilla planifolia HOM05D003923 ORTHO05D004553 1.3e-21 108.2 344 32.3
BolC7t42678H Brassica oleracea HOM05D003923 ORTHO05D004553 1.2e-19 101.7 173 41.6
Os02g0753400 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 2.0e-19 100.9 357 32.8
GSVIVG01009013001 Vitis vinifera HOM05D003923 ORTHO05D004553 2.0e-19 100.9 206 36.4
A07p43420 Brassica napus HOM05D003923 ORTHO05D004553 1.8e-15 87.8 107 51.4
Os09g0370000 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 5.2e-15 86.3 365 33.2
ATR0153G027 Amborella trichopoda HOM05D003923 ORTHO05D004553 2.7e-11 73.9 167 34.7
SEGI_08873 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 5.9e-11 72.8 246 29.7
unitig_578.g16204 Utricularia gibba HOM05D003923 ORTHO05D004553 5.9e-11 72.8 207 32.9
ATR0602G295 Amborella trichopoda HOM05D004118 ORTHO05D004686 1.3e-10 71.6 306 26.5
BcaB03g11901 Brassica carinata HOM05D003923 ORTHO05D004553 8.6e-10 68.9 100 43.0
Cfa020624 Carpinus fangiana HOM05D004118 ORTHO05D004686 6.1e-08 62.8 314 25.2
CsaV3_3G019580 Cucumis sativus L. HOM05D004118 ORTHO05D004686 6.1e-08 62.8 323 24.8
MELO3C019394.2 Cucumis melo HOM05D004118 ORTHO05D004686 2.3e-07 60.8 321 24.9
Haze_09381 Corylus avellana HOM05D004118 ORTHO05D004686 4.0e-07 60.1 317 24.3
MBI07_g32544_MAGBIO Magnolia biondii HOM05D004118 ORTHO05D004686 5.2e-07 59.7 294 24.5
BcaC07g38451 Brassica carinata HOM05D003923 ORTHO05D004553 6.8e-07 59.3 92 41.3
Nn1g04275 Nelumbo nucifera HOM05D004118 ORTHO05D004686 1.2e-06 58.5 291 24.1
Peaxi162Scf00069g00197 Petunia axillaris HOM05D004118 ORTHO05D004686 2.0e-06 57.8 293 25.6
Eucgr.F01179 Eucalyptus grandis HOM05D004118 ORTHO05D004686 3.4e-06 57.0 327 25.1
CiPaw.12G116800 Carya illinoinensis HOM05D004118 ORTHO05D004686 4.4e-06 56.6 318 26.1
Prupe.4G173200 Prunus persica HOM05D004118 ORTHO05D004686 5.8e-06 56.2 340 24.1
BolC8t49783H Brassica oleracea HOM05D003923 ORTHO05D004553 9.8e-06 55.5 109 34.9
Lj8C153G19 Lonicera japonica HOM05D004118 ORTHO05D004686 9.8e-06 55.5 291 26.8


User provided reference genes

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