Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 1.1e-105 386.7 211 100.0
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 1.6e-83 313.2 211 80.1
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 3.8e-77 292.0 211 76.8
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 3.0e-74 282.3 214 73.4
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 9.0e-71 270.8 210 69.5
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 2.6e-70 269.2 211 72.5
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 4.2e-68 261.9 211 71.6
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 9.3e-68 260.8 210 66.2
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 9.3e-68 260.8 210 67.1
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 1.6e-67 260.0 203 70.0
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 2.1e-67 259.6 210 67.1
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 3.5e-67 258.8 210 68.6
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 7.9e-67 257.7 211 66.8
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 3.0e-66 255.8 210 67.1
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 3.9e-66 255.4 211 69.7
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 1.5e-65 253.4 211 65.9
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 1.5e-65 253.4 210 68.1
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 1.9e-65 253.1 211 65.9
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 5.6e-65 251.5 212 67.5
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 1.6e-64 250.0 211 68.2
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 2.8e-64 249.2 211 66.4
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 3.1e-63 245.7 208 63.5
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 3.1e-63 245.7 211 64.5
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 4.0e-63 245.4 206 67.5
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 5.3e-63 245.0 211 65.4
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 2.6e-62 242.7 211 64.9
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 3.4e-62 242.3 211 64.5
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 2.2e-61 239.6 211 63.5
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 4.9e-61 238.4 217 66.8
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 6.4e-61 238.0 211 63.5
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 1.4e-60 236.9 211 63.0
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 7.1e-60 234.6 216 65.7
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 7.1e-60 234.6 219 60.7
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 9.3e-60 234.2 177 72.9
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 9.3e-60 234.2 211 64.0
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 1.2e-59 233.8 212 67.0
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 1.6e-59 233.4 212 61.3
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.6e-59 233.4 211 63.5
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 1.6e-59 233.4 226 61.1
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 2.1e-59 233.0 208 63.5
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 2.7e-59 232.6 213 61.5
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 7.9e-59 231.1 211 63.0
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.0e-58 230.7 211 63.0
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 1.3e-58 230.3 204 65.2
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 1.3e-58 230.3 213 63.8
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 3.9e-58 228.8 213 60.6
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 3.9e-58 228.8 210 62.9
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 3.3e-57 225.7 207 63.3
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 4.3e-57 225.3 209 62.2
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 5.6e-57 224.9 213 60.6
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 7.4e-57 224.6 228 58.8
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 9.6e-57 224.2 217 59.4
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 2.8e-56 222.6 224 59.4
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 3.7e-56 222.2 218 61.9
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 4.8e-56 221.9 228 58.3
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 4.8e-56 221.9 229 57.2
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 1.4e-55 220.3 215 60.5
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 1.8e-55 219.9 213 59.6
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.8e-55 219.9 232 57.3
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 4.0e-55 218.8 224 58.5
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 2.0e-54 216.5 213 59.6
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 2.6e-54 216.1 220 59.1
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 2.6e-54 216.1 212 60.4
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 7.6e-54 214.5 211 62.6
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 2.2e-53 213.0 209 60.3
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 6.5e-53 211.5 208 57.7
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 1.1e-52 210.7 213 60.1
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 1.4e-52 210.3 215 58.1
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 1.9e-52 209.9 222 59.0
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 1.9e-52 209.9 214 59.8
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 1.9e-52 209.9 215 59.5
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 2.5e-52 209.5 215 57.7
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 3.2e-52 209.1 213 61.0
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 5.5e-52 208.4 215 59.1
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 2.1e-51 206.5 226 55.8
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 6.0e-51 204.9 211 57.8
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 7.9e-51 204.5 219 57.5
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 1.8e-50 203.4 205 58.0
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 3.9e-50 202.2 211 56.9
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 1.1e-49 200.7 212 58.5
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 4.3e-49 198.7 214 56.5
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 4.3e-49 198.7 214 56.5
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 1.5e-46 190.3 128 78.1
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 1.3e-45 187.2 214 54.2
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 1.3e-45 187.2 206 54.4
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 2.9e-45 186.0 214 56.1
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 1.9e-44 183.3 215 56.3
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 1.9e-44 183.3 214 55.6
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 1.9e-44 183.3 214 55.6
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 1.9e-44 183.3 215 56.3
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 2.5e-44 183.0 202 56.9
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 7.1e-44 181.4 214 52.8
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 7.1e-44 181.4 177 60.5
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 1.8e-42 176.8 205 53.2
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 3.9e-42 175.6 119 78.2
Rhsim01G0085900 Rhododendron simsii HOM05D006141 ORTHO05D007670 6.7e-42 174.9 210 50.0
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 5.7e-41 171.8 184 53.3
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 4.8e-40 168.7 123 73.2
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 3.4e-38 162.5 119 69.7
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 1.0e-37 161.0 120 72.5
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 6.1e-35 151.8 208 45.7
Haze_05144 Corylus avellana HOM05D006141 ORTHO05D007670 7.9e-35 151.4 211 49.3
Rhsim01G0086800 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.8e-34 150.2 211 47.4
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 1.7e-32 143.7 91 79.1
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 1.1e-31 141.0 88 79.5
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 2.7e-27 126.3 202 43.1
Ciclev10030079m.g Citrus clementina HOM05D006141 ORTHO05D007670 3.6e-27 125.9 164 47.6
Ciclev10030249m.g Citrus clementina HOM05D006141 ORTHO05D007670 3.6e-27 125.9 170 48.2
Lj2A1216T56 Lonicera japonica HOM05D006141 ORTHO05D007670 3.9e-26 122.5 82 78.0
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 2.6e-25 119.8 212 41.5
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 2.6e-22 109.8 208 38.5
Rhsim12G0140700 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.7e-19 99.8 152 48.7
Rhsim01G0082900 Rhododendron simsii HOM05D006141 ORTHO05D007670 4.7e-19 99.0 166 42.2
SHI33165 Sapria himalayana HOM05D006141 ORTHO05D007670 4.7e-19 99.0 134 45.5
Nitab4.5_0008976g0040 Nicotiana tabacum HOM05D006141 ORTHO05D007670 1.8e-15 87.0 127 43.3
Atru.chr5.867 Acer truncatum HOM05D006141 ORTHO05D007670 5.9e-14 82.0 89 60.7
Rhsim01G0083000 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.9e-13 79.7 112 48.2
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 6.5e-13 78.6 208 35.1
BcaC09g48717 Brassica carinata HOM05D001214 ORTHO05D001029 1.9e-12 77.0 45 84.4
Rhsim01G0081900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.9e-12 77.0 46 84.8
FAN03G1225 Fragaria x ananassa HOM05D006141 ORTHO05D007670 7.2e-12 75.1 44 79.5
AagrBONN_evm.TU.Sc2ySwM_368.766 Anthoceros agrestis HOM05D006141 ORTHO05D007670 1.8e-10 70.5 147 36.1
DCAR_012300 Daucus carota HOM05D006141 ORTHO05D007670 1.1e-07 61.2 38 73.7
Cpa.g.sc57.9 Carica papaya HOM05D006141 ORTHO05D007670 1.2e-06 57.8 84 44.0
Rhsim01G0082000 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.6e-06 57.4 208 28.8
MCO02G477 Micromonas commoda HOM05D006141 ORTHO05D007670 7.7e-06 55.1 152 32.2


User provided reference genes

Program Settings