Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 5.4e-62 240.7 115 100.0
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 3.3e-35 151.8 82 90.2
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 9.6e-35 150.2 82 86.6
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 3.7e-34 148.3 82 85.4
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 2.4e-33 145.6 82 84.1
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 2.4e-33 145.6 82 84.1
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 2.4e-33 145.6 82 84.1
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 9.0e-33 143.7 81 85.2
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 2.6e-32 142.1 82 81.7
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 3.4e-32 141.7 82 84.1
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 4.5e-32 141.4 82 82.9
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 4.5e-32 141.4 82 81.7
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 5.8e-32 141.0 81 82.7
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 7.6e-32 140.6 82 82.9
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 7.6e-32 140.6 81 82.7
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 7.6e-32 140.6 82 80.5
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 1.0e-31 140.2 82 81.7
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 1.0e-31 140.2 82 81.7
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 2.2e-31 139.0 82 82.9
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 2.2e-31 139.0 82 81.7
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 2.2e-31 139.0 81 82.7
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 2.9e-31 138.7 82 79.3
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 2.9e-31 138.7 77 85.7
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 4.9e-31 137.9 82 78.0
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 4.9e-31 137.9 75 88.0
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 4.9e-31 137.9 82 81.7
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 6.5e-31 137.5 82 78.0
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 1.1e-30 136.7 84 79.8
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 1.1e-30 136.7 90 75.6
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 1.1e-30 136.7 90 75.6
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 1.1e-30 136.7 80 81.2
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 1.1e-30 136.7 81 80.2
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 1.1e-30 136.7 82 79.3
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 1.4e-30 136.3 82 79.3
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 1.4e-30 136.3 80 81.2
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 1.4e-30 136.3 80 80.0
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 1.4e-30 136.3 80 80.0
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 1.4e-30 136.3 81 80.2
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 1.9e-30 136.0 82 78.0
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 1.9e-30 136.0 82 79.3
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 2.5e-30 135.6 83 79.5
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 2.5e-30 135.6 83 79.5
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 2.5e-30 135.6 82 76.8
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 2.5e-30 135.6 82 78.0
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 3.2e-30 135.2 82 80.5
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 4.2e-30 134.8 83 79.5
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 4.2e-30 134.8 83 79.5
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 4.2e-30 134.8 83 79.5
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 4.2e-30 134.8 83 79.5
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 5.5e-30 134.4 81 81.5
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 7.1e-30 134.0 90 74.4
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 7.1e-30 134.0 82 76.8
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 7.1e-30 134.0 82 76.8
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 9.3e-30 133.7 83 77.1
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 9.3e-30 133.7 82 78.0
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 1.2e-29 133.3 82 75.6
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 1.6e-29 132.9 82 76.8
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 1.6e-29 132.9 81 76.5
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 2.1e-29 132.5 82 78.0
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 2.7e-29 132.1 82 75.6
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 6.0e-29 131.0 82 75.6
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 1.0e-28 130.2 82 73.2
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 1.3e-28 129.8 79 77.2
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 1.3e-28 129.8 82 75.6
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 1.8e-28 129.4 86 74.4
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 2.3e-28 129.0 84 78.6
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 2.3e-28 129.0 84 78.6
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 2.3e-28 129.0 82 74.4
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 3.0e-28 128.6 85 74.1
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 5.1e-28 127.9 83 74.7
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 5.1e-28 127.9 79 75.9
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 5.1e-28 127.9 83 74.7
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 8.7e-28 127.1 86 68.6
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 1.1e-27 126.7 92 67.4
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 1.5e-27 126.3 83 72.3
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 2.5e-27 125.6 74 79.7
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 2.5e-27 125.6 82 72.0
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 2.5e-27 125.6 80 70.0
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 3.3e-27 125.2 83 72.3
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 3.3e-27 125.2 82 69.5
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 3.3e-27 125.2 81 72.8
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 4.3e-27 124.8 83 73.5
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 4.3e-27 124.8 82 75.6
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 7.4e-27 124.0 81 70.4
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 7.4e-27 124.0 81 70.4
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 7.4e-27 124.0 81 70.4
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 9.6e-27 123.6 83 72.3
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 9.6e-27 123.6 80 73.8
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 9.6e-27 123.6 80 73.8
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.3e-26 123.2 102 64.7
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 1.3e-26 123.2 81 71.6
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 2.8e-26 122.1 81 70.4
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 3.7e-26 121.7 79 70.9
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 6.3e-26 120.9 82 70.7
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 1.1e-25 120.2 81 67.9
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 1.1e-25 120.2 81 67.9
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 2.4e-25 119.0 76 73.7
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 2.4e-25 119.0 73 78.1
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 4.1e-25 118.2 80 70.0
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 4.1e-25 118.2 77 72.7
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 5.3e-25 117.9 72 76.4
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 6.9e-25 117.5 79 64.6
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 2.6e-24 115.5 68 80.9
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 1.7e-23 112.8 79 65.8
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 2.9e-23 112.1 64 82.8
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 8.4e-23 110.5 77 68.8
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 7.2e-22 107.5 64 78.1
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 3.0e-20 102.1 64 73.4
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 6.7e-20 100.9 69 76.8
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 1.1e-19 100.1 65 72.3
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 1.5e-19 99.8 76 57.9
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 5.7e-19 97.8 79 57.0
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 9.7e-19 97.1 68 63.2
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 6.3e-18 94.4 63 69.8
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 8.2e-18 94.0 69 63.8
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 4.1e-17 91.7 69 71.0
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 1.7e-10 69.7 77 42.9
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 8.2e-10 67.4 73 41.1
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 1.2e-08 63.5 69 43.5
vmacro22872 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 2.5e-06 55.8 45 62.2
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 5.5e-06 54.7 69 36.2


User provided reference genes

Program Settings