Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p033984 Quercus lobata HOM05D008942 ORTHO05D009202 7.1e-63 243.8 127 100.0
Thecc.01G321000 Theobroma cacao HOM05D008942 ORTHO05D009202 1.9e-20 102.8 123 51.2
QL12p033964 Quercus lobata HOM05D008942 ORTHO05D009202 3.3e-20 102.1 129 53.5
CiPaw.07G122200 Carya illinoinensis HOM05D008942 ORTHO05D009202 5.3e-18 94.7 126 52.4
CiPaw.08G085000 Carya illinoinensis HOM05D008942 ORTHO05D009202 2.0e-17 92.8 148 44.6
Potri.014G115800 Populus trichocarpa HOM05D008942 ORTHO05D009202 3.4e-17 92.0 132 49.2
Sabra02G0164800 Salix brachista HOM05D008942 ORTHO05D009202 3.8e-16 88.6 132 47.0
Sabra14G0085900 Salix brachista HOM05D008942 ORTHO05D009202 5.0e-16 88.2 132 46.2
Potri.002G190700 Populus trichocarpa HOM05D008942 ORTHO05D009202 6.5e-16 87.8 132 47.7
Duzib138G1053 Durio zibethinus HOM05D008942 ORTHO05D009202 1.1e-15 87.0 136 48.5
QL12p034826 Quercus lobata HOM05D008942 ORTHO05D009202 1.4e-15 86.7 124 49.2
CiPaw.07G122100 Carya illinoinensis HOM05D008942 ORTHO05D009202 7.2e-15 84.3 132 45.5
Cpa.g.sc1096.1 Carica papaya HOM05D008942 ORTHO05D009202 2.7e-14 82.4 132 43.9
CiPaw.08G085100 Carya illinoinensis HOM05D008942 ORTHO05D009202 2.7e-14 82.4 140 47.1
Manes.01G232300 Manihot esculenta HOM05D008942 ORTHO05D009202 2.7e-14 82.4 126 48.4
Cfa004867 Carpinus fangiana HOM05D008942 ORTHO05D009202 6.1e-14 81.3 129 45.0
Manes.01G232200 Manihot esculenta HOM05D008942 ORTHO05D009202 1.8e-13 79.7 126 46.0
Gohir.D08G142200 Gossypium hirsutum HOM05D008942 ORTHO05D009202 4.3e-12 75.1 132 41.7
Gorai.004G146500 Gossypium raimondii HOM05D008942 ORTHO05D009202 5.7e-12 74.7 132 40.9
Atru.chr5.920 Acer truncatum HOM05D008942 ORTHO05D009202 2.2e-11 72.8 143 41.3
Haze_05106 Corylus avellana HOM05D008942 ORTHO05D009202 6.3e-11 71.2 105 44.8
Cfa004866 Carpinus fangiana HOM05D008942 ORTHO05D009202 3.1e-10 68.9 107 46.7
Lj5g0018092 Lotus japonicus HOM05D008942 ORTHO05D009202 3.1e-10 68.9 126 38.1
RcHm_v2.0_Chr3g0457951 Rosa chinensis HOM05D009264 ORTHO05D009202 2.6e-09 65.9 129 40.3
MD17G1279600 Malus domestica HOM05D008942 ORTHO05D009202 3.4e-09 65.5 106 45.3
Gorai.007G120200 Gossypium raimondii HOM05D008942 ORTHO05D009202 5.9e-09 64.7 136 38.2
Gohir.D11G112000 Gossypium hirsutum HOM05D008942 ORTHO05D009202 7.7e-09 64.3 136 38.2
TWI59G1203 Tripterygium wilfordii HOM05D008942 ORTHO05D009202 1.3e-08 63.5 105 41.0
Haze_05107 Corylus avellana HOM05D008942 ORTHO05D009202 1.7e-08 63.2 139 38.8
TPR.G3019 Trifolium pratense HOM05D008942 ORTHO05D009202 1.7e-08 63.2 125 32.8
Medtr1g086430 Medicago truncatula HOM05D024167 ORTHO05D009202 2.2e-08 62.8 84 42.9
TWI59G0258 Tripterygium wilfordii HOM05D008942 ORTHO05D009202 2.2e-08 62.8 74 52.7
Gohir.A11G107000 Gossypium hirsutum HOM05D008942 ORTHO05D009202 2.9e-08 62.4 138 37.0
Cfa006734 Carpinus fangiana HOM05D009264 ORTHO05D009202 3.8e-08 62.0 110 35.5
Nn3g21851 Nelumbo nucifera HOM05D008325 ORTHO05D010336 6.5e-08 61.2 115 40.0
CSS0039740 Camellia sinensis var. sinensis HOM05D009264 ORTHO05D009202 8.5e-08 60.8 127 36.2
QL03p008780 Quercus lobata HOM05D009264 ORTHO05D009202 8.5e-08 60.8 93 43.0
QL03p013046 Quercus lobata HOM05D009264 ORTHO05D009202 8.5e-08 60.8 93 43.0
CiPaw.08G152800 Carya illinoinensis HOM05D009264 ORTHO05D009202 1.1e-07 60.5 127 37.8
Actinidia35505 Actinidia chinensis HOM05D009264 ORTHO05D009202 1.9e-07 59.7 116 39.7
CSS0022072 Camellia sinensis var. sinensis HOM05D009264 ORTHO05D009202 3.2e-07 58.9 127 36.2
Nn4g25439 Nelumbo nucifera HOM05D008325 ORTHO05D010336 5.5e-07 58.2 106 43.4
Potri.002G190800 Populus trichocarpa HOM05D008325 ORTHO05D010336 5.5e-07 58.2 111 35.1
Dinv33151 Davidia involucrata HOM05D008942 ORTHO05D009202 9.4e-07 57.4 95 40.0
Actinidia01668 Actinidia chinensis HOM05D009264 ORTHO05D009202 1.2e-06 57.0 88 39.8
Nn4g25438 Nelumbo nucifera HOM05D008942 ORTHO05D009202 1.6e-06 56.6 134 35.8
Duzib128G1262 Durio zibethinus HOM05D021022 ORTHO05D009202 2.7e-06 55.8 102 38.2
VMungo0464G1383 Vigna mungo HOM05D001566 ORTHO05D001449 2.7e-06 55.8 92 42.4
Thecc.05G327000 Theobroma cacao HOM05D021022 ORTHO05D009202 3.6e-06 55.5 105 38.1
SalBow7G0413 Salvia bowleyana HOM05D009264 ORTHO05D009202 4.7e-06 55.1 120 35.8
TAR633G2549 Trochodendron aralioides HOM05D009264 ORTHO05D009202 4.7e-06 55.1 102 36.3
Ciclev10022668m.g Citrus clementina HOM05D008942 ORTHO05D009202 6.1e-06 54.7 61 47.5
Phvul.007G211500 Phaseolus vulgaris HOM05D024167 ORTHO05D009202 6.1e-06 54.7 129 34.1
QL12p033939 Quercus lobata HOM05D008325 ORTHO05D010336 6.1e-06 54.7 121 35.5
Sabra05G0002200 Salix brachista HOM05D029997 ORTHO05D030092 7.9e-06 54.3 122 33.6


User provided reference genes

Program Settings