Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 2.9e-71 271.9 150 100.0
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 1.0e-52 210.3 147 76.9
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 1.2e-50 203.4 138 79.7
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 1.4e-49 199.9 139 77.0
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 3.1e-49 198.7 147 76.9
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 2.0e-48 196.1 138 76.1
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 3.4e-48 195.3 136 76.5
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 7.6e-48 194.1 140 75.0
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 9.9e-48 193.7 139 74.8
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 1.7e-47 193.0 143 74.8
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 8.4e-47 190.7 126 80.2
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 2.4e-46 189.1 126 79.4
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 3.2e-46 188.7 140 76.4
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 6.0e-45 184.5 128 75.8
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 1.3e-44 183.3 118 83.1
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 3.9e-44 181.8 121 77.7
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 6.6e-44 181.0 137 71.5
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 8.7e-44 180.6 181 59.7
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 8.7e-44 180.6 118 83.1
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 3.3e-43 178.7 118 79.7
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 4.3e-43 178.3 139 69.1
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 7.3e-43 177.6 131 71.8
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 7.3e-43 177.6 138 68.1
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 8.1e-42 174.1 139 71.2
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 2.4e-41 172.6 118 78.0
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 2.4e-41 172.6 136 68.4
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 2.4e-41 172.6 122 73.0
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 2.4e-41 172.6 122 73.0
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 2.4e-41 172.6 122 73.0
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 3.1e-41 172.2 139 68.3
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 4.0e-41 171.8 120 73.3
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 4.0e-41 171.8 139 68.3
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 6.9e-41 171.0 139 69.8
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 6.9e-41 171.0 123 74.0
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 9.0e-41 170.6 120 71.7
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 1.5e-40 169.9 129 71.3
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 2.0e-40 169.5 149 65.8
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 2.6e-40 169.1 152 63.2
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 3.4e-40 168.7 120 69.2
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 4.5e-40 168.3 126 72.2
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 5.8e-40 167.9 111 77.5
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 7.6e-40 167.5 126 72.2
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 9.9e-40 167.2 123 67.5
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 3.8e-39 165.2 133 65.4
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 3.8e-39 165.2 131 67.9
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 3.8e-39 165.2 126 70.6
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 4.9e-39 164.9 126 73.0
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 1.1e-38 163.7 154 63.0
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 1.1e-38 163.7 133 66.9
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 1.1e-38 163.7 131 67.9
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 2.4e-38 162.5 132 66.7
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 3.2e-38 162.2 130 68.5
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 3.2e-38 162.2 130 68.5
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 3.2e-38 162.2 130 68.5
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 3.2e-38 162.2 130 68.5
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 3.2e-38 162.2 139 66.2
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 4.2e-38 161.8 169 58.6
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 4.2e-38 161.8 169 58.6
SalBow4G3209 Salvia bowleyana HOM05D005411 ORTHO05D006463 7.1e-38 161.0 121 68.6
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 9.3e-38 160.6 132 66.7
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 9.3e-38 160.6 126 69.8
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 1.2e-37 160.2 143 63.6
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 2.1e-37 159.5 107 76.6
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 2.1e-37 159.5 132 65.2
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 2.1e-37 159.5 131 68.7
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 3.5e-37 158.7 131 65.6
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 3.5e-37 158.7 124 67.7
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 3.5e-37 158.7 131 65.6
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 3.5e-37 158.7 131 65.6
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 3.5e-37 158.7 131 66.4
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 1.0e-36 157.1 113 73.5
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 1.0e-36 157.1 113 73.5
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 1.8e-36 156.4 110 71.8
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 1.8e-36 156.4 107 72.9
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 2.3e-36 156.0 130 63.8
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 2.3e-36 156.0 142 59.2
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 8.7e-36 154.1 121 66.9
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 1.1e-35 153.7 109 71.6
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 1.1e-35 153.7 100 79.0
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 3.3e-35 152.1 99 77.8
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 4.3e-35 151.8 107 72.9
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 7.4e-35 151.0 110 70.0
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 1.3e-34 150.2 115 70.4
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 2.1e-34 149.4 166 57.8
Os07g0483400 Oryza sativa ssp. japonica HOM05D005411 ORTHO05D006463 1.1e-33 147.1 108 66.7
Lj8E221T1 Lonicera japonica HOM05D005411 ORTHO05D006463 4.0e-33 145.2 102 71.6
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 4.0e-33 145.2 120 65.0
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 6.9e-33 144.4 168 53.6
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 1.7e-31 139.8 117 64.1
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 2.9e-31 139.0 107 72.9
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 3.8e-31 138.7 116 63.8
Duzib205G1808 Durio zibethinus HOM05D005411 ORTHO05D006463 3.8e-31 138.7 139 57.6
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 6.4e-31 137.9 135 60.7
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 1.4e-30 136.7 124 60.5
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 1.4e-30 136.7 124 60.5
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 1.9e-30 136.3 91 76.9
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 3.2e-30 135.6 105 63.8
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 1.6e-29 133.3 102 70.6
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 1.0e-28 130.6 111 64.9
SEGI_09083 Sequoiadendron giganteum HOM05D005411 ORTHO05D006463 1.3e-28 130.2 105 62.9
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 2.3e-28 129.4 110 62.7
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 3.0e-28 129.0 117 61.5
Zm00001eb104990 Zea mays HOM05D005411 ORTHO05D006463 4.8e-26 121.7 86 68.6
BolC5t34770H Brassica oleracea HOM05D005411 ORTHO05D006463 3.1e-25 119.0 93 71.0
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 5.3e-25 118.2 132 57.6
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 5.3e-25 118.2 148 48.0
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 7.6e-24 114.4 87 65.5
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 1.7e-23 113.2 94 66.0
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 1.4e-22 110.2 103 58.3
BcaNung00977 Brassica carinata HOM05D005411 ORTHO05D006463 2.1e-21 106.3 67 77.6
CDE09G0994 Ceratophyllum demersum HOM05D005411 ORTHO05D006463 2.1e-21 106.3 96 59.4
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 1.0e-20 104.0 90 64.4
Pp3c11_2200 Physcomitrium patens HOM05D005411 ORTHO05D006463 3.0e-20 102.4 135 47.4
Mapoly0008s0209 Marchantia polymorpha HOM05D005411 ORTHO05D006463 8.7e-20 100.9 103 46.6
Duzib084G0828 Durio zibethinus HOM05D005411 ORTHO05D006463 9.7e-19 97.4 129 47.3
AagrBONN_evm.TU.Sc2ySwM_369.479 Anthoceros agrestis HOM05D005411 ORTHO05D006463 4.8e-18 95.1 84 54.8
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 2.4e-17 92.8 61 82.0
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 4.1e-17 92.0 64 81.2
Potri.003G127900 Populus trichocarpa HOM05D005411 ORTHO05D006463 9.0e-17 90.9 130 44.6
SHI07138 Sapria himalayana HOM05D005411 ORTHO05D006463 1.7e-15 86.7 68 67.6
Oeu047371.1 Olea europaea HOM05D005411 ORTHO05D006463 3.2e-14 82.4 70 61.4
BcaC01g04135 Brassica carinata HOM05D005411 ORTHO05D006463 2.1e-13 79.7 56 71.4
SMO329G0027 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 2.3e-12 76.3 78 51.3
SMO358G0504 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 2.3e-12 76.3 78 51.3
BolC3t16740H Brassica oleracea HOM05D005411 ORTHO05D006463 5.1e-12 75.1 67 62.7
C03p44770 Brassica napus HOM05D005411 ORTHO05D006463 6.7e-12 74.7 67 62.7
Sabra17G0003100 Salix brachista HOM05D005411 ORTHO05D006463 1.7e-10 70.1 77 53.2
Sabra17G0003800 Salix brachista HOM05D005411 ORTHO05D006463 1.7e-10 70.1 77 53.2
HPP92_001497 Vanilla planifolia HOM05D005411 ORTHO05D006463 3.7e-10 68.9 46 69.6
Sabra18G0123000 Salix brachista HOM05D005411 ORTHO05D006463 6.3e-10 68.2 77 51.9
Sabra14G0123800 Salix brachista HOM05D005411 ORTHO05D006463 2.4e-09 66.2 77 50.6
COL.COLO4_34468 Corchorus olitorius HOM05D005411 ORTHO05D006463 3.1e-09 65.9 65 58.5
BcaB05g22557 Brassica carinata HOM05D002513 ORTHO05D002720 1.2e-08 63.9 77 53.2
Eucgr.H02258 Eucalyptus grandis HOM05D005411 ORTHO05D006463 1.5e-08 63.5 62 66.1
Sabra17G0034500 Salix brachista HOM05D005411 ORTHO05D006463 1.9e-06 56.6 111 38.7


User provided reference genes

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