Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p032645 Quercus lobata HOM05D001713 ORTHO05D001669 7.3e-106 387.5 233 100.0
QL12p032723 Quercus lobata HOM05D001713 ORTHO05D001669 3.5e-76 288.9 215 87.0
QL02p102444 Quercus lobata HOM05D001713 ORTHO05D001669 7.6e-47 191.4 220 56.4
QL02p103065 Quercus lobata HOM05D001713 ORTHO05D001669 8.4e-46 188.0 220 55.5
QL02p103081 Quercus lobata HOM05D001713 ORTHO05D001669 4.2e-45 185.7 220 55.0
QL12p032673 Quercus lobata HOM05D001713 ORTHO05D001669 2.5e-42 176.4 111 91.0
QL02p102432 Quercus lobata HOM05D001713 ORTHO05D001669 5.3e-40 168.7 214 56.5
QL12p033094 Quercus lobata HOM05D001713 ORTHO05D001669 8.0e-20 101.7 143 42.0
Cpa.g.sc28.53 Carica papaya HOM05D001713 ORTHO05D001669 3.5e-15 86.3 151 37.7
Cpa.g.sc85.9 Carica papaya HOM05D001713 ORTHO05D001669 3.5e-15 86.3 148 33.8
CiPaw.11G135200 Carya illinoinensis HOM05D001713 ORTHO05D001669 6.5e-14 82.0 81 53.1
CiPaw.04G131800 Carya illinoinensis HOM05D001713 ORTHO05D001669 8.5e-14 81.6 177 33.3
CiPaw.04G131900 Carya illinoinensis HOM05D001713 ORTHO05D001669 2.5e-13 80.1 177 32.8
Manes.18G110700 Manihot esculenta HOM05D001713 ORTHO05D001669 9.4e-13 78.2 146 35.6
Manes.18G142304 Manihot esculenta HOM05D001713 ORTHO05D001669 1.6e-12 77.4 145 34.5
Cfa010546 Carpinus fangiana HOM05D001713 ORTHO05D001669 6.1e-12 75.5 134 35.1
Haze_03476 Corylus avellana HOM05D001713 ORTHO05D001669 6.1e-12 75.5 138 34.1
Thecc.01G009000 Theobroma cacao HOM05D001713 ORTHO05D001669 6.1e-12 75.5 139 35.3
Thecc.01G009200 Theobroma cacao HOM05D001713 ORTHO05D001669 6.1e-12 75.5 139 36.0
Atru.chr1.3165 Acer truncatum HOM05D001713 ORTHO05D001669 8.0e-12 75.1 99 45.5
FvH4_3g33791 Fragaria vesca HOM05D001713 ORTHO05D001669 1.0e-11 74.7 77 48.1
FAN11G3424 Fragaria x ananassa HOM05D001713 ORTHO05D001669 1.0e-11 74.7 77 48.1
Manes.18G110100 Manihot esculenta HOM05D001713 ORTHO05D001669 1.0e-11 74.7 144 33.3
RcHm_v2.0_Chr5g0082871 Rosa chinensis HOM05D001713 ORTHO05D001669 1.0e-11 74.7 65 58.5
FAN16G0125 Fragaria x ananassa HOM05D001713 ORTHO05D001669 1.4e-11 74.3 77 46.8
Atru.chr1.3164 Acer truncatum HOM05D001713 ORTHO05D001669 2.3e-11 73.6 85 48.2
Thecc.01G009300 Theobroma cacao HOM05D001713 ORTHO05D001669 2.3e-11 73.6 138 33.3
Cfa016920 Carpinus fangiana HOM05D001713 ORTHO05D001669 5.2e-11 72.4 131 34.4
QL93p0165_0009 Quercus lobata HOM05D001713 ORTHO05D001669 5.2e-11 72.4 83 47.0
COL.COLO4_10852 Corchorus olitorius HOM05D001713 ORTHO05D001669 6.7e-11 72.0 68 55.9
Ciclev10006773m.g Citrus clementina HOM05D001713 ORTHO05D001669 8.8e-11 71.6 142 37.3
Manes.18G110600 Manihot esculenta HOM05D001713 ORTHO05D001669 8.8e-11 71.6 144 31.9
Manes.18G110675 Manihot esculenta HOM05D001713 ORTHO05D001669 8.8e-11 71.6 144 31.9
Manes.18G142300 Manihot esculenta HOM05D001713 ORTHO05D001669 8.8e-11 71.6 145 33.1
QL08p058986 Quercus lobata HOM05D001713 ORTHO05D001669 8.8e-11 71.6 83 45.8
Cfa010548 Carpinus fangiana HOM05D001713 ORTHO05D001669 1.2e-10 71.2 113 35.4
Thecc.01G156600 Theobroma cacao HOM05D001713 ORTHO05D001669 1.2e-10 71.2 128 35.9
Thecc.08G154200 Theobroma cacao HOM05D001713 ORTHO05D001669 1.2e-10 71.2 142 35.9
Potri.004G099600 Populus trichocarpa HOM05D001713 ORTHO05D001669 2.0e-10 70.5 96 41.7
FvH4_3g37630 Fragaria vesca HOM05D001713 ORTHO05D001669 2.6e-10 70.1 75 46.7
Sabra03G0021400 Salix brachista HOM05D001713 ORTHO05D001669 2.6e-10 70.1 141 35.5
Sabra03G0141500 Salix brachista HOM05D001713 ORTHO05D001669 2.6e-10 70.1 142 35.9
Sabra03G0141700 Salix brachista HOM05D001713 ORTHO05D001669 2.6e-10 70.1 142 35.9
Sabra03G0141900 Salix brachista HOM05D001713 ORTHO05D001669 2.6e-10 70.1 142 35.9
Sabra03G0142100 Salix brachista HOM05D001713 ORTHO05D001669 2.6e-10 70.1 142 35.9
Sabra03G0142300 Salix brachista HOM05D001713 ORTHO05D001669 2.6e-10 70.1 142 35.9
Sabra03G0142500 Salix brachista HOM05D001713 ORTHO05D001669 2.6e-10 70.1 142 35.9
Sabra03G0142800 Salix brachista HOM05D001713 ORTHO05D001669 2.6e-10 70.1 142 35.9
Ciclev10006908m.g Citrus clementina HOM05D001713 ORTHO05D001669 3.3e-10 69.7 147 36.1
FAN21G2960 Fragaria x ananassa HOM05D001713 ORTHO05D001669 3.3e-10 69.7 75 46.7
Manes.18G142350 Manihot esculenta HOM05D001713 ORTHO05D001669 3.3e-10 69.7 145 32.4
Haze_09859 Corylus avellana HOM05D003572 ORTHO05D004118 4.4e-10 69.3 115 35.7
Ciclev10006716m.g Citrus clementina HOM05D001713 ORTHO05D001669 7.5e-10 68.6 133 37.6
COL.COLO4_05119 Corchorus olitorius HOM05D001713 ORTHO05D001669 7.5e-10 68.6 66 50.0
Haze_09851 Corylus avellana HOM05D001713 ORTHO05D001669 7.5e-10 68.6 131 32.8
PGR031G2861 Punica granatum HOM05D001713 ORTHO05D001669 9.7e-10 68.2 81 46.9
Haze_08779 Corylus avellana HOM05D000141 ORTHO05D001860 1.3e-09 67.8 82 42.7
VMungo1309G1291 Vigna mungo HOM05D001713 ORTHO05D001669 1.3e-09 67.8 93 44.1
Dinv38941 Davidia involucrata HOM05D001713 ORTHO05D001669 1.7e-09 67.4 79 49.4
Eucgr.E02046 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.7e-09 67.4 84 46.4
Eucgr.E02057 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.7e-09 67.4 84 46.4
Gohir.D10G047401 Gossypium hirsutum HOM05D001713 ORTHO05D001669 1.7e-09 67.4 67 46.3
Gorai.011G050500 Gossypium raimondii HOM05D001713 ORTHO05D001669 1.7e-09 67.4 67 46.3
Eucgr.L02104 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.2e-09 67.0 84 46.4
Glyma.06G207800 Glycine max HOM05D001713 ORTHO05D001669 2.2e-09 67.0 143 35.7
PGR031G3325 Punica granatum HOM05D001713 ORTHO05D001669 2.2e-09 67.0 88 44.3
Sabra18G0027300 Salix brachista HOM05D001713 ORTHO05D001669 2.2e-09 67.0 141 34.0
Cfa011927 Carpinus fangiana HOM05D001713 ORTHO05D001669 2.8e-09 66.6 82 42.7
Duzib264G0660 Durio zibethinus HOM05D001713 ORTHO05D001669 2.8e-09 66.6 73 41.1
Duzib268G1296 Durio zibethinus HOM05D001713 ORTHO05D001669 3.7e-09 66.2 117 36.8
Eucgr.E02053 Eucalyptus grandis HOM05D001713 ORTHO05D001669 3.7e-09 66.2 84 45.2
Gohir.A10G046150 Gossypium hirsutum HOM05D001713 ORTHO05D001669 3.7e-09 66.2 67 46.3
Potri.003G191901 Populus trichocarpa HOM05D001713 ORTHO05D001669 3.7e-09 66.2 139 34.5
Prupe.5G102500 Prunus persica HOM05D001713 ORTHO05D001669 3.7e-09 66.2 166 33.1
TAR374G0438 Trochodendron aralioides HOM05D001713 ORTHO05D001669 3.7e-09 66.2 84 40.5
Haze_09172 Corylus avellana HOM05D001713 ORTHO05D001669 4.8e-09 65.9 121 35.5
Eucgr.E02044 Eucalyptus grandis HOM05D001713 ORTHO05D001669 4.8e-09 65.9 84 46.4
Eucgr.L01802 Eucalyptus grandis HOM05D001713 ORTHO05D001669 4.8e-09 65.9 84 46.4
Manes.18G109800 Manihot esculenta HOM05D001713 ORTHO05D001669 4.8e-09 65.9 73 42.5
Manes.18G110650 Manihot esculenta HOM05D001713 ORTHO05D001669 4.8e-09 65.9 73 42.5
Sabra03G0142700 Salix brachista HOM05D001713 ORTHO05D001669 4.8e-09 65.9 87 43.7
Sabra04G0080400 Salix brachista HOM05D001713 ORTHO05D001669 4.8e-09 65.9 92 43.5
arahy.Tifrunner.gnm1.ann1.GE1X0Z Arachis hypogaea HOM05D001713 ORTHO05D001669 8.2e-09 65.1 81 45.7
Duzib187G1730 Durio zibethinus HOM05D001713 ORTHO05D001669 8.2e-09 65.1 112 32.1
Eucgr.E02048 Eucalyptus grandis HOM05D001713 ORTHO05D001669 8.2e-09 65.1 84 45.2
FvH4_3g45250 Fragaria vesca HOM05D001713 ORTHO05D001669 8.2e-09 65.1 65 53.8
FAN11G3165 Fragaria x ananassa HOM05D001713 ORTHO05D001669 8.2e-09 65.1 65 53.8
FAN21G3366 Fragaria x ananassa HOM05D001713 ORTHO05D001669 8.2e-09 65.1 63 55.6
Lj5g0002472 Lotus japonicus HOM05D001713 ORTHO05D001669 8.2e-09 65.1 117 38.5
Manes.18G110400 Manihot esculenta HOM05D001713 ORTHO05D001669 8.2e-09 65.1 145 33.1
QL02p074390 Quercus lobata HOM05D001713 ORTHO05D001669 8.2e-09 65.1 134 36.6
arahy.Tifrunner.gnm1.ann1.PE7EYC Arachis hypogaea HOM05D001713 ORTHO05D001669 1.1e-08 64.7 81 45.7
FAN25G2775 Fragaria x ananassa HOM05D001713 ORTHO05D001669 1.1e-08 64.7 63 55.6
Medtr2g058520 Medicago truncatula HOM05D001713 ORTHO05D001669 1.1e-08 64.7 85 43.5
Eucgr.E02051 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.4e-08 64.3 84 44.0
Psat1g027960 Pisum sativum HOM05D001713 ORTHO05D001669 1.4e-08 64.3 85 43.5
Sabra04G0080300 Salix brachista HOM05D001713 ORTHO05D001669 1.4e-08 64.3 99 41.4
Atru.chr1.395 Acer truncatum HOM05D001713 ORTHO05D001669 1.8e-08 63.9 83 41.0
Haze_08778 Corylus avellana HOM05D001713 ORTHO05D001669 1.8e-08 63.9 86 38.4
Eucgr.E01923 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.8e-08 63.9 71 43.7
Eucgr.E02050 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.8e-08 63.9 84 45.2
Eucgr.L03694 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.8e-08 63.9 84 45.2
RcHm_v2.0_Chr1g0351961 Rosa chinensis HOM05D001713 ORTHO05D001669 1.8e-08 63.9 71 47.9
AL4G29400 Arabidopsis lyrata HOM05D001713 ORTHO05D001669 2.4e-08 63.5 138 32.6
Eucgr.E02060 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.4e-08 63.5 84 45.2
Gohir.A09G192201 Gossypium hirsutum HOM05D001713 ORTHO05D001669 2.4e-08 63.5 67 43.3
Eucgr.E01937 Eucalyptus grandis HOM05D001713 ORTHO05D001669 3.1e-08 63.2 72 47.2
Eucgr.E02047 Eucalyptus grandis HOM05D001713 ORTHO05D001669 3.1e-08 63.2 84 45.2
Glyma.04G156400 Glycine max HOM05D001713 ORTHO05D001669 3.1e-08 63.2 93 43.0
Gohir.D09G186450 Gossypium hirsutum HOM05D001713 ORTHO05D001669 3.1e-08 63.2 67 43.3
Gorai.006G209200 Gossypium raimondii HOM05D001713 ORTHO05D001669 3.1e-08 63.2 67 43.3
Sabra04G0086700 Salix brachista HOM05D001713 ORTHO05D001669 3.1e-08 63.2 85 42.4
Cfa012186 Carpinus fangiana HOM05D001713 ORTHO05D001669 4.1e-08 62.8 68 45.6
Psat0s4104g0040 Pisum sativum HOM05D001713 ORTHO05D001669 4.1e-08 62.8 92 44.6
Psat6g047560 Pisum sativum HOM05D001713 ORTHO05D001669 4.1e-08 62.8 92 44.6
QL02p074404 Quercus lobata HOM05D001713 ORTHO05D001669 4.1e-08 62.8 136 31.6
Cfa012230 Carpinus fangiana HOM05D001713 ORTHO05D001669 5.3e-08 62.4 81 42.0
Glyma.08G327600 Glycine max HOM05D001713 ORTHO05D001669 5.3e-08 62.4 70 44.3
Glyma.08G327800 Glycine max HOM05D001713 ORTHO05D001669 5.3e-08 62.4 70 44.3
Eucgr.E04373 Eucalyptus grandis HOM05D001713 ORTHO05D001669 7.0e-08 62.0 84 42.9
Hma1.2p1_2966F.1_g331000 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 7.0e-08 62.0 108 34.3
Haze_08832 Corylus avellana HOM05D001713 ORTHO05D001669 9.1e-08 61.6 131 34.4
Eucgr.E02039 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.2e-07 61.2 84 44.0
Eucgr.E02045 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.2e-07 61.2 84 44.0
Lj5g0023689 Lotus japonicus HOM05D001713 ORTHO05D001669 1.2e-07 61.2 124 34.7
Lj6g0000820 Lotus japonicus HOM05D001713 ORTHO05D001669 1.2e-07 61.2 69 42.0
Nn1g06539 Nelumbo nucifera HOM05D001713 ORTHO05D001669 1.2e-07 61.2 86 36.0
QL02p074400 Quercus lobata HOM05D001713 ORTHO05D001669 1.2e-07 61.2 136 34.6
CiPaw.12G093100 Carya illinoinensis HOM05D001713 ORTHO05D001669 1.6e-07 60.8 126 36.5
Ca_02696_v3 Cicer arietinum L. HOM05D001713 ORTHO05D001669 1.6e-07 60.8 133 36.1
Lj6g0011540 Lotus japonicus HOM05D001713 ORTHO05D001669 1.6e-07 60.8 105 36.2
Lj6g0022283 Lotus japonicus HOM05D001713 ORTHO05D001669 1.6e-07 60.8 105 36.2
MD14G1106900 Malus domestica HOM05D001713 ORTHO05D001669 1.6e-07 60.8 76 35.5
AL5G19040 Arabidopsis lyrata HOM05D001713 ORTHO05D001669 2.0e-07 60.5 79 39.2
Nn4g26403 Nelumbo nucifera HOM05D001713 ORTHO05D001669 2.0e-07 60.5 89 33.7
Phvul.009G204600 Phaseolus vulgaris HOM05D001713 ORTHO05D001669 2.0e-07 60.5 124 37.1
Eucgr.E02029 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.7e-07 60.1 84 45.2
Eucgr.L01801 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.7e-07 60.1 81 45.7
Lj6g0015270 Lotus japonicus HOM05D001713 ORTHO05D001669 2.7e-07 60.1 70 42.9
Eucgr.E02054 Eucalyptus grandis HOM05D001713 ORTHO05D001669 3.5e-07 59.7 65 47.7
Eucgr.E04371 Eucalyptus grandis HOM05D001713 ORTHO05D001669 3.5e-07 59.7 92 40.2
Nn4g26398 Nelumbo nucifera HOM05D001713 ORTHO05D001669 3.5e-07 59.7 79 36.7
Prupe.5G092200 Prunus persica HOM05D001713 ORTHO05D001669 3.5e-07 59.7 144 31.2
TPR.G39275 Trifolium pratense HOM05D001713 ORTHO05D001669 4.5e-07 59.3 116 36.2
Glyma.04G143300 Glycine max HOM05D001713 ORTHO05D001669 5.9e-07 58.9 122 37.7
Hma1.2p1_2547F.1_g324190 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 5.9e-07 58.9 111 34.2
Hma1.2p1_2547F.1_g324191 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 5.9e-07 58.9 111 34.2
Hma1.2p1_2547F.1_g324193 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 5.9e-07 58.9 111 34.2
Lj3g0017442 Lotus japonicus HOM05D001713 ORTHO05D001669 5.9e-07 58.9 72 38.9
PGSC0003DMG400036318 Solanum tuberosum HOM05D001713 ORTHO05D001669 5.9e-07 58.9 163 32.5
Cfa012228 Carpinus fangiana HOM05D001713 ORTHO05D001669 7.7e-07 58.5 81 42.0
Duzib264G0415 Durio zibethinus HOM05D001713 ORTHO05D001669 7.7e-07 58.5 122 29.5
Cfa000346 Carpinus fangiana HOM05D039093 ORTHO05D001669 1.0e-06 58.2 64 42.2
TWI34G0085 Tripterygium wilfordii HOM05D001713 ORTHO05D001669 1.0e-06 58.2 151 30.5
Carub.0004s1534 Capsella rubella HOM05D001713 ORTHO05D001669 1.7e-06 57.4 110 32.7
Glyma.10G103500 Glycine max HOM05D001713 ORTHO05D001669 1.7e-06 57.4 68 42.6
Sp4g16060 Schrenkiella parvula HOM05D001713 ORTHO05D001669 1.7e-06 57.4 152 32.9
Eucgr.E02075 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.2e-06 57.0 72 38.9
Nn1g01519 Nelumbo nucifera HOM05D001713 ORTHO05D001669 2.2e-06 57.0 88 40.9
PGSC0003DMG400039957 Solanum tuberosum HOM05D001713 ORTHO05D001669 2.2e-06 57.0 76 42.1
Atru.chr1.393 Acer truncatum HOM05D001713 ORTHO05D001669 2.9e-06 56.6 73 43.8
AT2G33720 Arabidopsis thaliana HOM05D001713 ORTHO05D001669 2.9e-06 56.6 135 30.4
Migut.N02454 Erythranthe guttata HOM05D001713 ORTHO05D001669 2.9e-06 56.6 72 44.4
Eucgr.E02074 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.9e-06 56.6 79 39.2
Sopen08g024550 Solanum pennellii HOM05D001713 ORTHO05D001669 2.9e-06 56.6 76 42.1
THA.LOC104815134 Tarenaya hassleriana HOM05D001713 ORTHO05D001669 3.8e-06 56.2 128 35.9
BcaC03g15829 Brassica carinata HOM05D001713 ORTHO05D001669 5.0e-06 55.8 75 38.7
CAN.G1427.2 Capsicum annuum HOM05D001713 ORTHO05D001669 5.0e-06 55.8 79 38.0
Migut.N02448 Erythranthe guttata HOM05D001713 ORTHO05D001669 5.0e-06 55.8 71 43.7
FAN03G0160 Fragaria x ananassa HOM05D001713 ORTHO05D001669 5.0e-06 55.8 102 34.3
Nitab4.5_0006036g0010 Nicotiana tabacum HOM05D001713 ORTHO05D001669 5.0e-06 55.8 75 40.0
Potri.003G191700 Populus trichocarpa HOM05D001713 ORTHO05D001669 5.0e-06 55.8 134 32.8
Cfa012233 Carpinus fangiana HOM05D001713 ORTHO05D001669 6.5e-06 55.5 107 35.5
COL.COLO4_24578 Corchorus olitorius HOM05D001713 ORTHO05D001669 6.5e-06 55.5 138 32.6
Lalb_Chr15g0083841 Lupinus albus HOM05D001713 ORTHO05D001669 6.5e-06 55.5 140 30.7
BraA02t07234Z Brassica rapa HOM05D001713 ORTHO05D001669 8.5e-06 55.1 67 41.8
Carub.0003s0487 Capsella rubella HOM05D001713 ORTHO05D001669 8.5e-06 55.1 99 31.3
Haze_08774 Corylus avellana HOM05D001713 ORTHO05D001669 8.5e-06 55.1 108 35.2
Eucgr.E02013 Eucalyptus grandis HOM05D001713 ORTHO05D001669 8.5e-06 55.1 103 36.9
Peaxi162Scf00675g00011 Petunia axillaris HOM05D001713 ORTHO05D001669 8.5e-06 55.1 73 39.7
Sp7g10240 Schrenkiella parvula HOM05D001713 ORTHO05D001669 8.5e-06 55.1 103 35.9
PGSC0003DMG400030877 Solanum tuberosum HOM05D001713 ORTHO05D001669 8.5e-06 55.1 149 30.2


User provided reference genes

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