Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 2.9e-114 415.2 206 100.0
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 1.1e-76 290.4 180 82.2
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 9.0e-76 287.3 182 81.9
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 3.4e-75 285.4 180 80.6
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 1.7e-74 283.1 180 80.6
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 1.1e-73 280.4 174 80.5
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.6e-72 276.6 174 79.9
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.6e-72 276.6 174 79.9
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 2.1e-72 276.2 174 79.9
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 2.7e-72 275.8 180 80.0
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 2.7e-72 275.8 185 77.3
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 4.6e-72 275.0 206 70.4
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 4.6e-72 275.0 180 79.4
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 7.9e-72 274.2 181 80.1
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.0e-71 273.9 174 79.3
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 1.0e-71 273.9 180 77.8
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 1.0e-71 273.9 184 77.2
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 3.0e-71 272.3 184 77.2
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 3.9e-71 271.9 175 77.1
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 1.9e-70 269.6 180 77.8
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 3.3e-70 268.9 175 78.3
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 5.7e-70 268.1 181 79.0
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 7.4e-70 267.7 172 79.1
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 1.3e-69 266.9 169 77.5
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 2.2e-69 266.2 176 76.7
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 3.7e-69 265.4 182 76.4
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 4.8e-69 265.0 181 75.1
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 4.8e-69 265.0 174 77.0
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 6.3e-69 264.6 168 78.6
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 8.2e-69 264.2 171 77.8
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 1.1e-68 263.8 171 77.8
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.1e-68 263.8 174 76.4
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 2.4e-68 262.7 180 73.3
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 4.1e-68 261.9 171 78.4
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 5.3e-68 261.5 202 69.3
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 5.3e-68 261.5 161 78.9
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 5.3e-68 261.5 180 75.6
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.2e-67 260.4 188 71.3
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 2.0e-67 259.6 202 71.3
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 2.0e-67 259.6 174 75.3
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 3.4e-67 258.8 142 82.4
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 4.5e-67 258.5 190 69.5
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 4.5e-67 258.5 165 74.5
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 4.5e-67 258.5 139 84.2
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 5.9e-67 258.1 161 77.0
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 1.7e-66 256.5 171 76.6
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 2.2e-66 256.1 175 73.7
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 2.2e-66 256.1 177 72.9
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 2.9e-66 255.8 184 70.1
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 2.9e-66 255.8 168 76.2
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 3.8e-66 255.4 171 74.9
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 3.8e-66 255.4 155 78.7
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 3.8e-66 255.4 172 77.3
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 3.8e-66 255.4 175 72.0
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 3.8e-66 255.4 174 74.1
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 8.5e-66 254.2 137 85.4
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 8.5e-66 254.2 137 85.4
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 8.5e-66 254.2 137 85.4
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 8.5e-66 254.2 137 85.4
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 1.1e-65 253.8 172 76.7
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 1.1e-65 253.8 188 70.7
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 3.2e-65 252.3 142 82.4
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 4.2e-65 251.9 183 71.0
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 7.2e-65 251.1 172 75.0
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 9.4e-65 250.8 201 65.7
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 9.4e-65 250.8 180 71.1
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 9.4e-65 250.8 180 72.2
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 1.2e-64 250.4 207 67.1
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 1.2e-64 250.4 170 74.7
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 1.6e-64 250.0 180 71.7
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 1.6e-64 250.0 170 71.2
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 2.1e-64 249.6 155 77.4
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 2.1e-64 249.6 180 72.2
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 4.6e-64 248.4 171 72.5
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 1.8e-63 246.5 181 70.2
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 1.8e-63 246.5 183 68.3
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 3.0e-63 245.7 178 70.2
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 1.5e-62 243.4 143 81.1
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 2.0e-62 243.0 180 71.7
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 2.0e-62 243.0 149 79.9
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 1.3e-61 240.4 138 79.7
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 3.7e-61 238.8 180 70.0
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 2.0e-59 233.0 181 65.7
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 4.5e-59 231.9 124 86.3
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 5.0e-58 228.4 167 70.1
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 8.5e-58 227.6 148 73.0
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 1.6e-56 223.4 191 66.0
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 3.0e-55 219.2 138 74.6
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 5.2e-55 218.4 137 77.4
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 2.6e-51 206.1 112 83.9
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 5.9e-51 204.9 193 61.1
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 2.2e-50 203.0 108 86.1
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 3.8e-50 202.2 218 56.0
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 1.9e-49 199.9 151 64.2
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 2.8e-45 186.0 136 62.5
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 5.3e-44 181.8 137 63.5
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 1.6e-43 180.3 106 80.2
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 2.7e-43 179.5 123 69.1
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 4.7e-40 168.7 138 58.0
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 1.2e-38 164.1 82 93.9
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 7.5e-22 108.2 123 44.7
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.8e-20 103.6 173 39.3
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 2.5e-09 66.6 37 75.7
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 4.4e-06 55.8 87 41.4


User provided reference genes

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