Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 1.8e-279 965.3 490 100.0
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 6.6e-133 478.4 532 56.4
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 2.8e-107 393.3 492 48.6
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 8.7e-101 371.7 493 46.2
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 1.6e-99 367.5 539 43.6
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 2.6e-97 360.1 475 46.7
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 1.7e-93 347.4 494 44.3
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 5.6e-92 342.4 510 44.3
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 3.6e-91 339.7 553 40.7
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 8.1e-91 338.6 496 45.8
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 8.1e-91 338.6 503 44.9
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 4.5e-89 332.8 445 47.6
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 8.4e-88 328.6 497 44.9
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 1.1e-87 328.2 477 45.1
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 1.9e-87 327.4 488 42.8
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.3e-85 321.2 513 40.7
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 2.8e-83 313.5 513 40.5
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 2.4e-82 310.5 221 74.2
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 3.4e-81 306.6 494 41.3
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 7.1e-79 298.9 500 42.4
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 4.6e-78 296.2 394 47.0
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 1.5e-73 281.2 352 47.2
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 1.2e-70 271.6 462 40.0
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 7.9e-70 268.9 514 40.1
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.3e-69 268.1 473 37.8
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 1.6e-67 261.2 318 50.9
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 2.7e-62 243.8 298 48.7
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 3.9e-61 240.0 418 41.1
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 4.5e-57 226.5 496 36.3
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 2.9e-56 223.8 399 38.6
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 3.8e-56 223.4 289 50.5
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 1.1e-55 221.9 497 35.2
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 3.2e-55 220.3 480 37.3
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 3.2e-55 220.3 490 34.7
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 2.7e-54 217.2 481 36.6
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 1.4e-53 214.9 495 34.7
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 1.5e-52 211.5 511 36.2
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 1.5e-52 211.5 497 36.2
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 2.0e-52 211.1 487 35.3
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 2.0e-49 201.1 495 34.9
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 3.8e-48 196.8 502 32.7
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 8.5e-48 195.7 496 35.3
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 4.7e-46 189.9 486 33.3
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 1.0e-45 188.7 416 35.8
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 2.0e-44 184.5 476 34.5
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 2.6e-44 184.1 500 31.0
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 5.7e-44 183.0 460 35.4
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 9.7e-44 182.2 482 33.8
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 8.2e-43 179.1 500 31.4
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 1.1e-42 178.7 504 29.2
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 2.4e-42 177.6 344 39.5
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 2.4e-42 177.6 499 33.5
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 4.1e-42 176.8 367 35.4
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 5.3e-42 176.4 313 39.0
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 9.1e-42 175.6 487 32.9
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 7.7e-41 172.6 500 33.4
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 1.1e-39 168.7 510 34.5
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 1.1e-39 168.7 508 30.1
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 4.2e-39 166.8 504 30.4
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 2.7e-38 164.1 506 29.6
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 1.4e-37 161.8 511 32.1
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 3.0e-37 160.6 416 32.2
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 6.8e-37 159.5 506 29.2
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 2.0e-36 157.9 417 32.1
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 9.8e-36 155.6 397 34.8
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 2.2e-35 154.5 489 31.9
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 4.8e-35 153.3 502 29.1
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 2.4e-34 151.0 521 31.9
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 1.7e-32 144.8 403 33.7
DCAR_005809 Daucus carota HOM05D007164 ORTHO05D008802 2.9e-32 144.1 368 34.5
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 3.8e-32 143.7 375 33.9
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 1.5e-31 141.7 464 29.1
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 1.2e-30 138.7 472 30.3
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 2.7e-30 137.5 433 31.4
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 3.6e-30 137.1 454 30.2
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 3.6e-30 137.1 492 28.7
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 2.3e-29 134.4 308 35.7
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 7.5e-28 129.4 435 29.2
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 1.3e-27 128.6 192 41.7
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 3.7e-27 127.1 514 29.6
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 5.4e-26 123.2 210 40.5
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 9.2e-26 122.5 465 30.3
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 1.2e-25 122.1 523 27.2
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 3.5e-25 120.6 232 37.1
CiPaw.07G104400 Carya illinoinensis HOM05D007164 ORTHO05D008802 4.5e-25 120.2 183 47.0
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 1.0e-24 119.0 267 37.5
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 6.6e-24 116.3 474 30.6
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 4.3e-23 113.6 199 33.7
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 8.0e-22 109.4 356 27.8
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 8.9e-21 105.9 351 31.3
Duzib138G1663 Durio zibethinus HOM05D007164 ORTHO05D008802 1.7e-19 101.7 184 37.0
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 2.2e-19 101.3 205 36.6
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 3.7e-19 100.5 150 40.7
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 7.8e-17 92.8 162 37.7
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 2.5e-15 87.8 201 35.8
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 5.2e-13 80.1 371 28.3
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 8.9e-13 79.3 150 34.7
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 1.3e-11 75.5 75 50.7
EL10Ac7g17490 Beta vulgaris HOM05D007164 ORTHO05D008802 1.9e-10 71.6 339 27.4
BcaB06g26239 Brassica carinata HOM05D007164 ORTHO05D008802 1.3e-08 65.5 105 41.0
Zm00001eb133720 Zea mays HOM05D000144 ORTHO05D008802 5.0e-08 63.5 99 40.4
Glyma.20G061700 Glycine max HOM05D007164 ORTHO05D008802 1.6e-06 58.5 302 27.8
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 2.8e-06 57.8 76 36.8


User provided reference genes

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