Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p029096 Quercus lobata HOM05D000433 ORTHO05D003991 2.7e-49 198.4 99 100.0
Potri.018G043500 Populus trichocarpa HOM05D000433 ORTHO05D003991 6.6e-24 114.0 71 74.6
Thecc.09G043800 Theobroma cacao HOM05D000433 ORTHO05D003991 6.6e-24 114.0 71 73.2
Potri.006G239200 Populus trichocarpa HOM05D000433 ORTHO05D003991 1.9e-23 112.5 71 71.8
Sabra06G0187000 Salix brachista HOM05D000433 ORTHO05D003991 3.3e-23 111.7 71 73.2
Atru.chr7.2096 Acer truncatum HOM05D000433 ORTHO05D003991 5.6e-23 110.9 85 65.9
Cfa001732 Carpinus fangiana HOM05D000433 ORTHO05D003991 5.6e-23 110.9 72 75.0
Atru.chr7.2110 Acer truncatum HOM05D000433 ORTHO05D003991 7.3e-23 110.5 85 64.7
Potri.006G239402 Populus trichocarpa HOM05D000433 ORTHO05D003991 9.5e-23 110.2 72 70.8
COL.COLO4_18651 Corchorus olitorius HOM05D000433 ORTHO05D003991 1.2e-22 109.8 68 73.5
Haze_21881 Corylus avellana HOM05D000433 ORTHO05D003991 2.1e-22 109.0 75 70.7
Sabra18G0043100 Salix brachista HOM05D000433 ORTHO05D003991 2.1e-22 109.0 71 70.4
Hma1.2p1_0774F.1_g216310 Hydrangea macrophylla HOM05D000433 ORTHO05D015038 2.8e-22 108.6 71 69.0
Sopen08g020690 Solanum pennellii HOM05D000433 ORTHO05D003991 6.2e-22 107.5 82 59.8
Sabra18G0043600 Salix brachista HOM05D000433 ORTHO05D003991 8.0e-22 107.1 71 69.0
Sabra18G0043500 Salix brachista HOM05D000433 ORTHO05D003991 1.1e-21 106.7 71 69.0
Dinv14259 Davidia involucrata HOM05D000433 ORTHO05D003991 2.3e-21 105.5 72 65.3
Duzib168G1402 Durio zibethinus HOM05D000433 ORTHO05D003991 2.3e-21 105.5 67 71.6
Lj7C703T4 Lonicera japonica HOM05D000433 ORTHO05D003991 3.1e-21 105.1 71 66.2
CAN.G309.89 Capsicum annuum HOM05D000433 ORTHO05D003991 4.0e-21 104.8 82 59.8
CSS0012936 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 5.2e-21 104.4 70 64.3
Potri.006G239300 Populus trichocarpa HOM05D000433 ORTHO05D003991 5.2e-21 104.4 70 71.4
Manes.16G076200 Manihot esculenta HOM05D000433 ORTHO05D003991 1.2e-20 103.2 72 70.8
Phvul.009G109200 Phaseolus vulgaris HOM05D000433 ORTHO05D003991 1.2e-20 103.2 71 64.8
Ciclev10010551m.g Citrus clementina HOM05D000433 ORTHO05D003991 1.5e-20 102.8 85 56.5
Lj1g0021560 Lotus japonicus HOM05D000433 ORTHO05D003991 1.5e-20 102.8 71 62.0
VMungo1309G2807 Vigna mungo HOM05D000433 ORTHO05D003991 1.5e-20 102.8 71 64.8
Psat5g021960 Pisum sativum HOM05D000433 ORTHO05D003991 2.0e-20 102.4 71 60.6
Peaxi162Scf00323g00925 Petunia axillaris HOM05D000433 ORTHO05D003991 2.6e-20 102.1 68 66.2
Peaxi162Scf00323g00934 Petunia axillaris HOM05D000433 ORTHO05D003991 2.6e-20 102.1 82 58.5
TPR.G1382 Trifolium pratense HOM05D000433 ORTHO05D003991 3.4e-20 101.7 71 63.4
arahy.Tifrunner.gnm1.ann1.I9LXD5 Arachis hypogaea HOM05D000433 ORTHO05D003991 5.8e-20 100.9 86 57.0
Solyc11g071227.1 Solanum lycopersicum HOM05D000433 ORTHO05D003991 5.8e-20 100.9 82 58.5
Dinv14257 Davidia involucrata HOM05D000433 ORTHO05D003991 7.5e-20 100.5 72 65.3
TAR383G0708 Trochodendron aralioides HOM05D000433 ORTHO05D003991 7.5e-20 100.5 71 66.2
TPR.G1375 Trifolium pratense HOM05D000433 ORTHO05D003991 9.8e-20 100.1 71 63.4
CAN.G335.8 Capsicum annuum HOM05D000433 ORTHO05D003991 1.3e-19 99.8 82 57.3
FAN20G2606 Fragaria x ananassa HOM05D000433 ORTHO05D003991 1.3e-19 99.8 72 68.1
Hma1.2p1_0049F.1_g028700 Hydrangea macrophylla HOM05D000433 ORTHO05D003991 1.7e-19 99.4 61 75.4
Medtr3g110195 Medicago truncatula HOM05D000433 ORTHO05D003991 2.2e-19 99.0 71 59.2
Prupe.1G449100 Prunus persica HOM05D000433 ORTHO05D003991 2.2e-19 99.0 86 59.3
TAR383G1023 Trochodendron aralioides HOM05D000433 ORTHO05D003991 2.2e-19 99.0 71 62.0
Cc08_g09420 Coffea canephora HOM05D000433 ORTHO05D003991 2.9e-19 98.6 68 67.6
Oeu036367.1 Olea europaea HOM05D000433 ORTHO05D003991 2.9e-19 98.6 82 58.5
RcHm_v2.0_Chr6g0306131 Rosa chinensis HOM05D000433 ORTHO05D003991 2.9e-19 98.6 72 72.2
TWI34G1265 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 4.9e-19 97.8 74 66.2
FvH4_2g35670 Fragaria vesca HOM05D000433 ORTHO05D003991 8.3e-19 97.1 72 66.7
Oeu057713.1 Olea europaea HOM05D000433 ORTHO05D003991 8.3e-19 97.1 83 57.8
Glyma.06G085100 Glycine max HOM05D000433 ORTHO05D003991 1.1e-18 96.7 68 64.7
CAN.G792.2 Capsicum annuum HOM05D000433 ORTHO05D003991 1.4e-18 96.3 82 54.9
Potri.018G042650 Populus trichocarpa HOM05D000433 ORTHO05D003991 1.4e-18 96.3 71 62.0
Actinidia30273 Actinidia chinensis HOM05D000433 ORTHO05D003991 1.9e-18 95.9 71 64.8
Cpa.g.sc7.267 Carica papaya HOM05D000433 ORTHO05D003991 1.9e-18 95.9 71 59.2
Glyma.04G083500 Glycine max HOM05D000433 ORTHO05D003991 1.9e-18 95.9 86 57.0
PGSC0003DMG400004311 Solanum tuberosum HOM05D000433 ORTHO05D003991 1.9e-18 95.9 71 59.2
GSVIVG01035636001 Vitis vinifera HOM05D000433 ORTHO05D003991 1.9e-18 95.9 71 62.0
TWI34G1621 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 3.2e-18 95.1 74 63.5
PGSC0003DMG400004312 Solanum tuberosum HOM05D000433 ORTHO05D003991 4.1e-18 94.7 71 62.0
Cc08_g09430 Coffea canephora HOM05D000433 ORTHO05D003991 5.4e-18 94.4 67 62.7
Manes.03G057900 Manihot esculenta HOM05D000433 ORTHO05D003991 9.2e-18 93.6 72 63.9
CSS0015925 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 1.6e-17 92.8 71 60.6
CSS0016926 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 1.6e-17 92.8 71 60.6
Lj1g0020723 Lotus japonicus HOM05D000433 ORTHO05D003991 1.6e-17 92.8 68 61.8
Lj1g0023259 Lotus japonicus HOM05D000433 ORTHO05D003991 1.6e-17 92.8 68 61.8
Glyma.06G085000 Glycine max HOM05D000433 ORTHO05D003991 2.0e-17 92.4 85 56.5
MD08G1115000 Malus domestica HOM05D000433 ORTHO05D003991 2.0e-17 92.4 72 63.9
TWI34G0984 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 2.0e-17 92.4 74 60.8
CSS0045124 Camellia sinensis var. sinensis HOM05D000433 ORTHO05D003991 2.7e-17 92.0 71 59.2
CsaV3_3G048570 Cucumis sativus L. HOM05D000433 ORTHO05D003991 3.5e-17 91.7 72 55.6
Eucgr.C02921 Eucalyptus grandis HOM05D000433 ORTHO05D003991 3.5e-17 91.7 86 53.5
Prupe.1G449300 Prunus persica HOM05D000433 ORTHO05D003991 3.5e-17 91.7 68 63.2
PGR044G1800 Punica granatum HOM05D000433 ORTHO05D003991 3.5e-17 91.7 73 61.6
TWI34G0034 Tripterygium wilfordii HOM05D000433 ORTHO05D003991 3.5e-17 91.7 77 62.3
Psat5g021920 Pisum sativum HOM05D000433 ORTHO05D003991 4.6e-17 91.3 71 57.7
Dinv27895 Davidia involucrata HOM05D000433 ORTHO05D003991 6.0e-17 90.9 71 57.7
Glyma.04G083650 Glycine max HOM05D000433 ORTHO05D015038 6.0e-17 90.9 67 62.7
Gohir.1Z049422 Gossypium hirsutum HOM05D000433 ORTHO05D003991 6.0e-17 90.9 72 56.9
Gohir.A06G093600 Gossypium hirsutum HOM05D000433 ORTHO05D003991 6.0e-17 90.9 72 56.9
Solyc11g071223.1 Solanum lycopersicum HOM05D000433 ORTHO05D015038 6.0e-17 90.9 69 62.3
CANSAT25G0153 Cannabis sativa HOM05D000433 ORTHO05D003991 7.8e-17 90.5 68 61.8
Haze_16805 Corylus avellana HOM05D000433 ORTHO05D003991 7.8e-17 90.5 94 54.3
Migut.A00213 Erythranthe guttata HOM05D000433 ORTHO05D003991 7.8e-17 90.5 68 61.8
Gorai.009G050300 Gossypium raimondii HOM05D000433 ORTHO05D003991 7.8e-17 90.5 67 61.2
VMungo1309G0333 Vigna mungo HOM05D000433 ORTHO05D015038 7.8e-17 90.5 71 59.2
Gohir.D06G093300 Gossypium hirsutum HOM05D000433 ORTHO05D003991 1.0e-16 90.1 72 56.9
Gorai.010G107700 Gossypium raimondii HOM05D000433 ORTHO05D003991 1.0e-16 90.1 72 56.9
MBI04_g27076_MAGBIO Magnolia biondii HOM05D000433 ORTHO05D003991 1.0e-16 90.1 86 51.2
Atru.chr7.2097 Acer truncatum HOM05D000433 ORTHO05D003991 1.3e-16 89.7 71 59.2
Gohir.A05G047200 Gossypium hirsutum HOM05D000433 ORTHO05D003991 1.3e-16 89.7 69 60.9
Phvul.009G109100 Phaseolus vulgaris HOM05D000433 ORTHO05D003991 1.3e-16 89.7 86 52.3
Peaxi162Scf00227g00007 Petunia axillaris HOM05D000433 ORTHO05D003991 2.3e-16 89.0 63 68.3
PSO210G3307 Papaver somniferum HOM05D000433 ORTHO05D003991 3.0e-16 88.6 71 53.5
DCAR_003121 Daucus carota HOM05D000433 ORTHO05D003991 3.9e-16 88.2 71 52.1
Os09g0321200 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 8.6e-16 87.0 68 54.4
Migut.E01520 Erythranthe guttata HOM05D000433 ORTHO05D003991 1.1e-15 86.7 65 61.5
Migut.E01525 Erythranthe guttata HOM05D000433 ORTHO05D003991 1.1e-15 86.7 65 61.5
MD15G1094300 Malus domestica HOM05D000433 ORTHO05D003991 1.1e-15 86.7 71 56.3
Manes.03G057750 Manihot esculenta HOM05D000433 ORTHO05D003991 1.5e-15 86.3 71 56.3
MELO3C003462.2 Cucumis melo HOM05D000433 ORTHO05D003991 1.9e-15 85.9 72 51.4
Gohir.D05G049100 Gossypium hirsutum HOM05D000433 ORTHO05D003991 1.9e-15 85.9 85 51.8
TPR.G10772 Trifolium pratense HOM05D000433 ORTHO05D015038 1.9e-15 85.9 57 64.9
Lsat_1_v5_gn_6_24381 Lactuca sativa HOM05D000433 ORTHO05D003991 2.5e-15 85.5 72 54.2
GSVIVG01035633001 Vitis vinifera HOM05D000433 ORTHO05D003991 3.3e-15 85.1 68 57.4
Sed0013565 Sechium edule HOM05D000433 ORTHO05D003991 4.3e-15 84.7 71 49.3
FvH4_2g35680 Fragaria vesca HOM05D000433 ORTHO05D003991 5.6e-15 84.3 68 60.3
DCAR_003120 Daucus carota HOM05D000433 ORTHO05D003991 7.3e-15 84.0 70 52.9
Prupe.1G449200 Prunus persica HOM05D000433 ORTHO05D003991 7.3e-15 84.0 68 58.8
ECA246G2703 Erigeron canadensis HOM05D000433 ORTHO05D003991 9.5e-15 83.6 71 53.5
FAN15G3649 Fragaria x ananassa HOM05D000433 ORTHO05D003991 1.2e-14 83.2 68 58.8
ECA246G4238 Erigeron canadensis HOM05D000433 ORTHO05D003991 1.6e-14 82.8 68 48.5
FvH4_2g35681 Fragaria vesca HOM05D000433 ORTHO05D003991 2.1e-14 82.4 69 56.5
Cpa.g.sc522.4 Carica papaya HOM05D000433 ORTHO05D003991 2.8e-14 82.0 72 55.6
ECA246G0302 Erigeron canadensis HOM05D000433 ORTHO05D003991 2.8e-14 82.0 71 50.7
Dinv14256 Davidia involucrata HOM05D000433 ORTHO05D003991 4.7e-14 81.3 61 59.0
Eucgr.C02920 Eucalyptus grandis HOM05D000433 ORTHO05D003991 4.7e-14 81.3 70 52.9
Lsat_1_v5_gn_3_26320 Lactuca sativa HOM05D000433 ORTHO05D003991 4.7e-14 81.3 71 49.3
Sopen11g028910 Solanum pennellii HOM05D000433 ORTHO05D003991 6.2e-14 80.9 69 55.1
Eucgr.C00545 Eucalyptus grandis HOM05D000433 ORTHO05D003991 1.1e-13 80.1 70 55.7
Os08g0369800 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 1.8e-13 79.3 69 50.7
ATR0705G175 Amborella trichopoda HOM05D000433 ORTHO05D003991 2.3e-13 79.0 67 53.7
GSVIVG01035632001 Vitis vinifera HOM05D000433 ORTHO05D003991 3.1e-13 78.6 71 52.1
HanXRQChr13g0401881 Helianthus annuus HOM05D000433 ORTHO05D003991 4.0e-13 78.2 63 52.4
Lsat_1_v5_gn_3_26280 Lactuca sativa HOM05D000433 ORTHO05D003991 6.8e-13 77.4 71 45.1
Os08g0371200 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D015038 6.8e-13 77.4 68 52.9
Sabra18G0043000 Salix brachista HOM05D000433 ORTHO05D003991 1.5e-12 76.3 72 52.8
Zm00001eb309770 Zea mays HOM05D000433 ORTHO05D003991 1.5e-12 76.3 83 47.0
ECA233G3103 Erigeron canadensis HOM05D000433 ORTHO05D003991 2.0e-12 75.9 63 54.0
FAN13G2375 Fragaria x ananassa HOM05D000433 ORTHO05D003991 5.8e-12 74.3 68 52.9
GSVIVG01015259001 Vitis vinifera HOM05D000433 ORTHO05D015038 7.5e-12 73.9 62 56.5
FAN18G1489 Fragaria x ananassa HOM05D000433 ORTHO05D003991 1.7e-11 72.8 68 51.5
Os08g0371608 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 1.7e-11 72.8 68 52.9
Os06g0162550 Oryza sativa ssp. japonica HOM05D000433 ORTHO05D003991 2.2e-11 72.4 68 42.6
HanXRQChr17g0538671 Helianthus annuus HOM05D000433 ORTHO05D003991 4.9e-11 71.2 51 54.9
FvH4_5g00520 Fragaria vesca HOM05D000433 ORTHO05D003991 6.4e-11 70.9 63 54.0
HPP92_006323 Vanilla planifolia HOM05D000433 ORTHO05D003991 6.4e-11 70.9 63 55.6
Nitab4.5_0007838g0050 Nicotiana tabacum HOM05D000433 ORTHO05D003991 1.1e-10 70.1 82 43.9
ClCG11G015170 Citrullus lanatus HOM05D000433 ORTHO05D003991 5.4e-10 67.8 72 43.1
Zm00001eb375850 Zea mays HOM05D000433 ORTHO05D003991 1.9e-07 59.3 72 40.3
Nitab4.5_0009835g0010 Nicotiana tabacum HOM05D000433 ORTHO05D003991 7.3e-07 57.4 82 40.2
FAN08G0103 Fragaria x ananassa HOM05D000433 ORTHO05D003991 9.5e-07 57.0 68 45.6
Mapoly0012s0198 Marchantia polymorpha HOM05D000433 ORTHO05D003991 8.1e-06 53.9 72 38.9


User provided reference genes

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