Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 1.1e-87 326.6 169 100.0
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 2.2e-51 206.1 177 65.0
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 1.4e-45 186.8 180 63.3
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 4.4e-44 181.8 178 61.8
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 1.1e-42 177.2 183 57.4
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 1.6e-41 173.3 179 60.3
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 2.7e-41 172.6 174 64.4
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 1.7e-40 169.9 184 55.4
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 5.0e-40 168.3 177 56.5
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 6.6e-40 167.9 180 54.4
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 8.6e-40 167.5 187 56.7
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 1.9e-39 166.4 176 52.8
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 2.5e-39 166.0 184 54.9
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 3.3e-39 165.6 181 50.8
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 3.3e-39 165.6 179 53.1
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 7.2e-39 164.5 173 51.4
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 1.2e-38 163.7 187 52.9
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 1.6e-38 163.3 184 56.0
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 4.7e-38 161.8 178 53.4
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 4.7e-38 161.8 179 52.5
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 8.0e-38 161.0 185 55.7
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 1.4e-37 160.2 188 51.1
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 1.8e-37 159.8 166 54.2
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 3.0e-37 159.1 179 51.4
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 3.0e-37 159.1 175 54.3
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 4.0e-37 158.7 172 52.9
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 8.9e-37 157.5 184 51.6
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 1.2e-36 157.1 178 50.6
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 2.0e-36 156.4 185 51.4
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 2.6e-36 156.0 184 53.3
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 3.4e-36 155.6 166 53.6
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 3.4e-36 155.6 182 52.2
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 4.4e-36 155.2 187 50.8
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 4.4e-36 155.2 164 54.9
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 5.7e-36 154.8 167 53.3
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 5.7e-36 154.8 177 52.5
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 7.5e-36 154.5 189 51.3
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 9.8e-36 154.1 172 50.6
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 2.2e-35 152.9 191 49.7
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.7e-35 152.1 172 49.4
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 3.7e-35 152.1 165 53.3
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 4.9e-35 151.8 173 56.1
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 4.9e-35 151.8 188 50.5
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 1.4e-34 150.2 195 50.3
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.8e-34 149.8 191 49.2
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 7.0e-34 147.9 189 49.7
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 7.0e-34 147.9 178 50.6
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 1.2e-33 147.1 188 50.5
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 1.2e-33 147.1 200 50.0
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 1.6e-33 146.7 182 51.1
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 2.0e-33 146.4 169 52.1
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 3.5e-33 145.6 172 50.0
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 4.5e-33 145.2 186 50.0
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 4.5e-33 145.2 177 50.8
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.0e-32 144.1 179 49.7
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 1.3e-32 143.7 178 50.0
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 1.7e-32 143.3 175 53.1
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.7e-32 143.3 166 51.8
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.7e-32 143.3 178 48.9
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.7e-32 143.3 189 50.3
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 1.7e-32 143.3 177 49.7
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 1.7e-32 143.3 200 47.5
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 1.7e-32 143.3 169 53.3
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 2.3e-32 142.9 175 49.7
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.3e-32 142.9 181 51.9
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 3.9e-32 142.1 173 49.7
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 6.6e-32 141.4 181 48.6
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 6.6e-32 141.4 186 47.8
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 1.5e-31 140.2 170 50.6
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.5e-31 140.2 166 51.2
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 2.5e-31 139.4 167 50.3
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 3.3e-31 139.0 171 50.9
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 3.3e-31 139.0 188 48.9
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 4.3e-31 138.7 184 49.5
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 2.1e-30 136.3 180 47.2
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 2.8e-30 136.0 171 49.7
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 6.1e-30 134.8 214 43.9
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 6.1e-30 134.8 180 46.7
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 8.0e-30 134.4 170 47.6
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 1.0e-29 134.0 167 50.9
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.4e-29 133.7 182 45.1
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 1.8e-29 133.3 165 53.3
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.3e-29 132.9 175 48.0
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 3.1e-29 132.5 176 50.0
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 6.8e-29 131.3 184 47.3
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 6.8e-29 131.3 187 47.6
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.8e-29 131.3 170 48.2
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 6.8e-29 131.3 180 48.9
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 1.2e-28 130.6 166 48.8
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 2.0e-28 129.8 188 46.8
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 2.6e-28 129.4 180 47.8
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 2.6e-28 129.4 171 48.5
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 3.4e-28 129.0 189 46.6
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 3.4e-28 129.0 189 46.6
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 3.4e-28 129.0 189 46.6
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 3.4e-28 129.0 184 44.6
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 4.4e-28 128.6 168 48.2
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 4.4e-28 128.6 173 45.7
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 4.4e-28 128.6 180 43.9
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 4.4e-28 128.6 170 49.4
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 4.4e-28 128.6 183 49.2
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 4.4e-28 128.6 176 47.2
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 5.8e-28 128.3 188 45.2
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 7.5e-28 127.9 182 47.3
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.3e-27 127.1 188 44.1
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 1.7e-27 126.7 182 47.3
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 1.7e-27 126.7 182 47.3
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 2.2e-27 126.3 182 47.3
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 3.7e-27 125.6 173 52.0
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 3.7e-27 125.6 179 46.4
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 3.7e-27 125.6 181 48.6
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 4.9e-27 125.2 181 47.0
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 1.1e-26 124.0 176 44.9
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 1.9e-26 123.2 171 49.7
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 2.4e-26 122.9 180 45.6
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 2.4e-26 122.9 180 45.6
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 3.2e-26 122.5 181 47.5
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 5.4e-26 121.7 164 50.6
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 5.4e-26 121.7 170 40.6
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 7.0e-26 121.3 176 44.3
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 9.2e-26 120.9 176 44.3
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 9.2e-26 120.9 176 44.3
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 9.2e-26 120.9 176 44.3
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 9.2e-26 120.9 176 44.9
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 9.2e-26 120.9 174 46.0
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 1.2e-25 120.6 179 44.7
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 1.2e-25 120.6 179 44.7
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 2.7e-25 119.4 176 44.3
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.5e-25 119.0 169 45.6
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 4.6e-25 118.6 181 46.4
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 4.6e-25 118.6 171 43.9
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 1.0e-24 117.5 175 44.0
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 1.0e-24 117.5 171 45.6
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 6.6e-24 114.8 172 47.1
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.6e-24 114.4 172 43.0
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 8.6e-24 114.4 176 42.0
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.1e-23 114.0 174 41.4
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 1.5e-23 113.6 161 43.5
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 4.3e-23 112.1 167 43.7
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.7e-22 108.6 156 44.2
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 4.7e-22 108.6 155 45.8
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 1.8e-21 106.7 173 40.5
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.2e-21 105.1 172 42.4
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 6.8e-21 104.8 205 40.5
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 5.8e-20 101.7 163 46.0
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 1.7e-19 100.1 170 45.3
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.9e-19 98.6 160 41.2
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 1.9e-18 96.7 138 40.6
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.2e-18 95.9 148 44.6
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 3.2e-18 95.9 106 47.2
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 5.4e-18 95.1 161 39.1
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.4e-18 95.1 112 48.2
AUR62011841 Chenopodium quinoa HOM05D003790 ORTHO05D004481 7.0e-18 94.7 161 39.8
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 9.2e-18 94.4 165 40.0
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.2e-17 94.0 166 38.6
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 2.1e-17 93.2 199 38.2
Zm00001eb014210 Zea mays HOM05D003790 ORTHO05D004481 6.6e-16 88.2 210 38.6
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 4.3e-15 85.5 148 43.2
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.3e-15 84.7 115 42.6
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 7.3e-15 84.7 108 45.4
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 1.2e-14 84.0 128 42.2
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.2e-14 84.0 106 43.4
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 1.6e-14 83.6 210 36.7
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.2e-14 81.6 122 41.0
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 2.3e-13 79.7 167 40.1
HPP92_011875 Vanilla planifolia HOM05D003790 ORTHO05D004481 3.4e-12 75.9 166 40.4
Zm00001eb396420 Zea mays HOM05D003790 ORTHO05D004481 3.4e-12 75.9 199 33.7
Thhalv10029363m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 5.8e-12 75.1 142 38.7
ATR0706G232 Amborella trichopoda HOM05D003790 ORTHO05D004481 6.4e-11 71.6 173 31.8
MELO3C017926.2 Cucumis melo HOM05D003790 ORTHO05D044967 1.1e-10 70.9 160 39.4
SEGI_22681 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 7.1e-10 68.2 192 30.2
Nn6g33912 Nelumbo nucifera HOM05D003790 ORTHO05D004481 3.5e-09 65.9 87 46.0
CsaV3_4G001110 Cucumis sativus L. HOM05D003790 ORTHO05D044967 1.3e-08 63.9 167 34.7
Eucgr.A02768 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.7e-08 63.5 86 39.5
Eucgr.H01752 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.6e-07 58.5 70 47.1
SEGI_15713 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 4.7e-06 55.5 194 25.8
Sc17g0000580 Simmondsia chinensis HOM05D003790 ORTHO05D004481 6.2e-06 55.1 158 32.9


User provided reference genes

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