Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p027883 Quercus lobata HOM05D000085 ORTHO05D010963 3.2e-136 488.4 246 100.0
Haze_04974 Corylus avellana HOM05D000085 ORTHO05D010963 4.1e-43 179.1 275 44.0
Dinv19671 Davidia involucrata HOM05D000085 ORTHO05D010963 5.1e-33 145.6 277 40.1
CiPaw.07G111700 Carya illinoinensis HOM05D000085 ORTHO05D010963 1.1e-32 144.4 280 41.8
Cpa.g.sc151.23 Carica papaya HOM05D000085 ORTHO05D010963 3.8e-28 129.4 284 34.2
CSS0036515 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D010963 1.0e-25 121.3 184 39.7
MD11G1306800 Malus domestica HOM05D000085 ORTHO05D010963 3.9e-25 119.4 181 41.4
Lj1A22G97 Lonicera japonica HOM05D000085 ORTHO05D010963 1.1e-24 117.9 197 40.1
TWI14G1378 Tripterygium wilfordii HOM05D000085 ORTHO05D010963 1.1e-24 117.9 261 34.5
CSS0014489 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D010963 9.6e-24 114.8 170 42.9
Thecc.01G304600 Theobroma cacao HOM05D000085 ORTHO05D010963 9.6e-24 114.8 258 35.7
Ciclev10023498m.g Citrus clementina HOM05D000085 ORTHO05D010963 3.4e-21 106.3 146 45.9
CSS0000098 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D010963 1.3e-20 104.4 172 41.3
Gohir.D12G132400 Gossypium hirsutum HOM05D000085 ORTHO05D010963 1.3e-20 104.4 258 32.9
Gorai.008G143500 Gossypium raimondii HOM05D000085 ORTHO05D010963 1.3e-20 104.4 258 32.9
DCAR_018319 Daucus carota HOM05D000237 ORTHO05D010963 2.2e-20 103.6 232 36.2
Actinidia33273 Actinidia chinensis HOM05D000085 ORTHO05D010963 2.9e-20 103.2 145 44.1
FAN15G2422 Fragaria x ananassa HOM05D000085 ORTHO05D010963 4.9e-20 102.4 159 39.6
FAN24G0760 Fragaria x ananassa HOM05D000085 ORTHO05D010963 4.9e-20 102.4 159 39.6
Gohir.A12G128800 Gossypium hirsutum HOM05D000085 ORTHO05D010963 2.4e-19 100.1 258 32.9
FvH4_2g26020 Fragaria vesca HOM05D000085 ORTHO05D010963 3.2e-19 99.8 159 38.4
CSS0047686 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D010963 9.3e-19 98.2 159 40.3
FAN20G1817 Fragaria x ananassa HOM05D000085 ORTHO05D010963 9.3e-19 98.2 159 39.0
FAN27G3287 Fragaria x ananassa HOM05D000085 ORTHO05D010963 1.6e-18 97.4 153 40.5
CSS0021695 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D010963 2.1e-18 97.1 114 48.2
CSS0032274 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D010963 2.7e-18 96.7 113 48.7
Lsat_1_v5_gn_5_26700 Lactuca sativa HOM05D000085 ORTHO05D010963 1.3e-17 94.4 203 37.9
Cfa005877 Carpinus fangiana HOM05D000085 ORTHO05D010963 3.0e-17 93.2 212 36.3
Duzib211G0145 Durio zibethinus HOM05D000085 ORTHO05D010963 3.0e-17 93.2 227 33.0
CSS0027000 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D010963 6.2e-15 85.5 90 48.9
ECA246G4713 Erigeron canadensis HOM05D000085 ORTHO05D010963 1.1e-14 84.7 214 33.6
COL.COLO4_23313 Corchorus olitorius HOM05D000085 ORTHO05D010963 2.0e-13 80.5 272 29.8
Atru.chr5.1100 Acer truncatum HOM05D000085 ORTHO05D010963 8.4e-12 75.1 199 33.2
Gohir.D12G253900 Gossypium hirsutum HOM05D000033 ORTHO05D001999 3.7e-07 59.7 171 28.7
Gorai.008G271600 Gossypium raimondii HOM05D000033 ORTHO05D001999 3.7e-07 59.7 171 28.7
CSS0015649 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D010963 4.8e-07 59.3 135 34.8
Gohir.A12G253801 Gossypium hirsutum HOM05D000033 ORTHO05D001999 1.4e-06 57.8 171 28.1
Lj5g0006496 Lotus japonicus HOM05D000085 ORTHO05D009949 2.4e-06 57.0 62 45.2
Thecc.03G191500 Theobroma cacao HOM05D000033 ORTHO05D001999 2.4e-06 57.0 199 27.1
TPR.G15754 Trifolium pratense HOM05D000085 ORTHO05D009949 2.4e-06 57.0 62 46.8
Glyma.07G013700 Glycine max HOM05D000106 ORTHO05D000160 4.0e-06 56.2 66 40.9
Psat6g010240 Pisum sativum HOM05D000085 ORTHO05D009949 5.3e-06 55.8 61 45.9
Ca_13321_v3 Cicer arietinum L. HOM05D000085 ORTHO05D009949 6.9e-06 55.5 110 30.9


User provided reference genes

Program Settings