Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p027193 Quercus lobata HOM05D001134 ORTHO05D337374 1.0e-60 236.5 114 100.0
QL12p028903 Quercus lobata HOM05D001134 ORTHO05D001035 2.5e-11 72.4 37 94.6
Potri.014G123800 Populus trichocarpa HOM05D001134 ORTHO05D001035 2.1e-10 69.3 37 81.1
Sabra14G0092100 Salix brachista HOM05D001134 ORTHO05D001035 2.1e-10 69.3 37 81.1
Gohir.D12G130500 Gossypium hirsutum HOM05D001134 ORTHO05D001035 1.8e-09 66.2 37 78.4
Gorai.008G141800 Gossypium raimondii HOM05D001134 ORTHO05D001035 1.8e-09 66.2 37 78.4
Aqoxy2G02814 Aquilegia oxysepala HOM05D001134 ORTHO05D001035 2.4e-09 65.9 81 45.7
TAR362G1229 Trochodendron aralioides HOM05D001134 ORTHO05D001035 2.4e-09 65.9 37 78.4
Duzib211G0495 Durio zibethinus HOM05D001134 ORTHO05D001035 3.1e-09 65.5 94 41.5
Gohir.A12G127100 Gossypium hirsutum HOM05D001134 ORTHO05D001035 3.1e-09 65.5 37 78.4
Sc05g0003260 Simmondsia chinensis HOM05D001134 ORTHO05D001035 3.1e-09 65.5 37 75.7
CiPaw.07G114600 Carya illinoinensis HOM05D001134 ORTHO05D001035 4.0e-09 65.1 46 71.7
Prupe.8G269300 Prunus persica HOM05D001134 ORTHO05D001035 6.9e-09 64.3 37 73.0
SEGI_28012 Sequoiadendron giganteum HOM05D001134 ORTHO05D001035 6.9e-09 64.3 81 43.2
Nn3g21619 Nelumbo nucifera HOM05D001134 ORTHO05D001035 9.0e-09 63.9 37 75.7
VMungo0720G0107 Vigna mungo HOM05D001134 ORTHO05D001035 9.0e-09 63.9 37 75.7
vmacro02418 Vaccinium macrocarpon HOM05D001134 ORTHO05D001035 1.2e-08 63.5 38 73.7
ECA236G3461 Erigeron canadensis HOM05D001958 ORTHO05D001971 1.5e-08 63.2 37 78.4
MBI18_g24954_MAGBIO Magnolia biondii HOM05D001134 ORTHO05D001035 1.5e-08 63.2 37 75.7
FAN18G4364 Fragaria x ananassa HOM05D001134 ORTHO05D001035 2.0e-08 62.8 32 81.2
Glyma.02G014666 Glycine max HOM05D001134 ORTHO05D001035 2.0e-08 62.8 37 73.0
Glyma.10G015300 Glycine max HOM05D001134 ORTHO05D001035 2.0e-08 62.8 37 73.0
Hma1.2p1_0212F.1_g090140 Hydrangea macrophylla HOM05D001134 ORTHO05D001035 2.0e-08 62.8 75 49.3
Phvul.007G216500 Phaseolus vulgaris HOM05D001134 ORTHO05D001035 2.0e-08 62.8 37 75.7
Hund05462 Selenicereus undatus HOM05D001134 ORTHO05D001035 2.0e-08 62.8 65 49.2
FvH4_5g39640 Fragaria vesca HOM05D001134 ORTHO05D001035 2.6e-08 62.4 32 78.1
FAN08G1535 Fragaria x ananassa HOM05D001134 ORTHO05D001035 2.6e-08 62.4 32 78.1
Lj5g0008377 Lotus japonicus HOM05D001134 ORTHO05D001035 2.6e-08 62.4 32 87.5
ATR0706G073 Amborella trichopoda HOM05D001134 ORTHO05D001035 3.4e-08 62.0 62 51.6
Medtr1g087750 Medicago truncatula HOM05D001134 ORTHO05D001035 4.5e-08 61.6 37 75.7
CANSAT25G0602 Cannabis sativa HOM05D001134 ORTHO05D001035 5.8e-08 61.2 37 75.7
Cfa005847 Carpinus fangiana HOM05D001134 ORTHO05D003078 5.8e-08 61.2 37 75.7
Haze_05002 Corylus avellana HOM05D001134 ORTHO05D001035 7.6e-08 60.8 37 75.7
Rhsim13G0006700 Rhododendron simsii HOM05D001134 ORTHO05D001035 7.6e-08 60.8 37 70.3
EL10Ac7g17617 Beta vulgaris HOM05D001134 ORTHO05D001035 9.9e-08 60.5 37 67.6
Manes.05G001400 Manihot esculenta HOM05D001134 ORTHO05D001035 9.9e-08 60.5 37 70.3
RcHm_v2.0_Chr7g0241951 Rosa chinensis HOM05D001134 ORTHO05D001035 9.9e-08 60.5 32 78.1
AUR62008748 Chenopodium quinoa HOM05D001134 ORTHO05D001035 1.3e-07 60.1 37 64.9
PSO210G4721 Papaver somniferum HOM05D001134 ORTHO05D001035 1.3e-07 60.1 37 70.3
PSO761G0655 Papaver somniferum HOM05D001134 ORTHO05D001035 1.3e-07 60.1 37 70.3
Psat6g162880 Pisum sativum HOM05D001134 ORTHO05D001035 1.3e-07 60.1 37 73.0
TPR.G19771 Trifolium pratense HOM05D001134 ORTHO05D001035 1.7e-07 59.7 37 73.0
HPP92_018263 Vanilla planifolia HOM05D001134 ORTHO05D001035 1.7e-07 59.7 37 70.3
AUR62025490 Chenopodium quinoa HOM05D001134 ORTHO05D001035 2.2e-07 59.3 65 44.6
Cc07_g15240 Coffea canephora HOM05D001134 ORTHO05D001035 2.9e-07 58.9 37 70.3
Eucgr.K03521 Eucalyptus grandis HOM05D001134 ORTHO05D001035 2.9e-07 58.9 37 67.6
CDE09G0188 Ceratophyllum demersum HOM05D001134 ORTHO05D001035 3.8e-07 58.5 37 70.3
MD03G1297600 Malus domestica HOM05D001134 ORTHO05D001035 3.8e-07 58.5 37 70.3
Nitab4.5_0008750g0040 Nicotiana tabacum HOM05D001134 ORTHO05D001035 3.8e-07 58.5 37 73.0
CSS0031747 Camellia sinensis var. sinensis HOM05D001134 ORTHO05D001035 6.4e-07 57.8 37 67.6
Lalb_Chr21g0309441 Lupinus albus HOM05D001134 ORTHO05D001035 6.4e-07 57.8 37 67.6
Peaxi162Scf00140g01352 Petunia axillaris HOM05D001134 ORTHO05D001035 8.4e-07 57.4 37 67.6
Nitab4.5_0006939g0020 Nicotiana tabacum HOM05D001134 ORTHO05D001035 1.4e-06 56.6 37 70.3
Solyc06g084590.4 Solanum lycopersicum HOM05D001134 ORTHO05D001035 1.4e-06 56.6 37 67.6
Sopen06g035960 Solanum pennellii HOM05D001134 ORTHO05D001035 1.4e-06 56.6 37 67.6
PGSC0003DMG402024038 Solanum tuberosum HOM05D001134 ORTHO05D001035 1.9e-06 56.2 37 67.6
SGA_v2.0_scaffold376G50263 Striga asiatica HOM05D001134 ORTHO05D001035 1.9e-06 56.2 37 67.6
Migut.D00105 Erythranthe guttata HOM05D001134 ORTHO05D001035 2.4e-06 55.8 37 64.9


User provided reference genes

Program Settings