Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p020979 Quercus lobata HOM05D008542 ORTHO05D009486 2.5e-33 144.8 70 100.0
CiPaw.08G107700 Carya illinoinensis HOM05D008542 ORTHO05D009486 1.2e-16 89.4 69 62.3
TWI18G0041 Tripterygium wilfordii HOM05D008542 ORTHO05D009486 3.6e-16 87.8 69 60.9
TWI75G0224 Tripterygium wilfordii HOM05D008542 ORTHO05D009486 1.0e-15 86.3 69 62.3
Actinidia24911 Actinidia chinensis HOM05D008542 ORTHO05D009486 1.5e-14 82.4 69 62.3
Eucgr.H01456 Eucalyptus grandis HOM05D008542 ORTHO05D009486 3.3e-14 81.3 69 56.5
Eucgr.K03345 Eucalyptus grandis HOM05D008542 ORTHO05D009486 4.4e-14 80.9 67 58.2
Dinv32906 Davidia involucrata HOM05D008542 ORTHO05D009486 4.8e-13 77.4 70 60.0
Actinidia00784 Actinidia chinensis HOM05D008542 ORTHO05D009486 1.4e-12 75.9 69 56.5
Oeu029462.1 Olea europaea HOM05D008542 ORTHO05D009486 1.4e-12 75.9 68 55.9
Nitab4.5_0001729g0040 Nicotiana tabacum HOM05D008542 ORTHO05D009486 1.8e-12 75.5 69 56.5
Actinidia09119 Actinidia chinensis HOM05D008542 ORTHO05D009486 2.4e-12 75.1 69 56.5
Hma1.2p1_0667F.1_g199740 Hydrangea macrophylla HOM05D008542 ORTHO05D009486 3.1e-12 74.7 69 56.5
PGR044G1462 Punica granatum HOM05D008542 ORTHO05D009486 3.1e-12 74.7 67 55.2
TAR260G0004 Trochodendron aralioides HOM05D008542 ORTHO05D009486 4.1e-12 74.3 65 56.9
Rhsim13G0027000 Rhododendron simsii HOM05D008542 ORTHO05D009486 5.3e-12 73.9 66 54.5
Actinidia21129 Actinidia chinensis HOM05D008542 ORTHO05D009486 2.0e-11 72.0 69 55.1
Nitab4.5_0000252g0080 Nicotiana tabacum HOM05D008542 ORTHO05D009486 2.0e-11 72.0 68 55.9
vmacro02595 Vaccinium macrocarpon HOM05D008542 ORTHO05D009486 2.0e-11 72.0 65 53.8
Sabra05G0162200 Salix brachista HOM05D008542 ORTHO05D009486 2.6e-11 71.6 68 52.9
Cpa.g.sc52.57 Carica papaya HOM05D008542 ORTHO05D009486 3.5e-11 71.2 71 53.5
Peaxi162Scf00783g00135 Petunia axillaris HOM05D008542 ORTHO05D009486 4.5e-11 70.9 65 50.8
Potri.002G050150 Populus trichocarpa HOM05D008542 ORTHO05D009486 1.0e-10 69.7 65 55.4
Cfa006170 Carpinus fangiana HOM05D007167 ORTHO05D009486 2.2e-10 68.6 68 55.9
Peaxi162Scf00230g00137 Petunia axillaris HOM05D008542 ORTHO05D009486 2.2e-10 68.6 69 47.8
Potri.010G084700 Populus trichocarpa HOM05D008542 ORTHO05D009486 6.5e-10 67.0 69 47.8
Nitab4.5_0008064g0010 Nicotiana tabacum HOM05D008542 ORTHO05D009486 8.5e-10 66.6 69 44.9
CsaV3_6G008480 Cucumis sativus L. HOM05D011255 ORTHO05D009486 1.5e-09 65.9 78 46.2
Aqoxy2G03426 Aquilegia oxysepala HOM05D008542 ORTHO05D009486 2.5e-09 65.1 65 46.2
MELO3C022293.2 Cucumis melo HOM05D011255 ORTHO05D009486 2.5e-09 65.1 78 47.4
Lj2A1168T24 Lonicera japonica HOM05D008542 ORTHO05D009486 2.5e-09 65.1 69 46.4
Prupe.8G237700 Prunus persica HOM05D008542 ORTHO05D009486 2.5e-09 65.1 70 50.0
PGR119G1184 Punica granatum HOM05D008542 ORTHO05D009486 2.5e-09 65.1 69 52.2
Sabra08G0118400 Salix brachista HOM05D008542 ORTHO05D009486 7.2e-09 63.5 69 44.9
PGR004G2295 Punica granatum HOM05D008542 ORTHO05D009486 1.2e-08 62.8 69 43.5
SHI00480 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-08 62.8 67 41.8
Sabra10G0058600 Salix brachista HOM05D008542 ORTHO05D009486 2.1e-08 62.0 66 45.5
MELO3C035236.2 Cucumis melo HOM05D011255 ORTHO05D009486 4.7e-08 60.8 78 42.3
Potri.008G155600 Populus trichocarpa HOM05D008542 ORTHO05D009486 4.7e-08 60.8 69 43.5
COL.COLO4_21518 Corchorus olitorius HOM05D008542 ORTHO05D009486 6.1e-08 60.5 73 47.9
Haze_04680 Corylus avellana HOM05D007167 ORTHO05D009486 1.0e-07 59.7 69 52.2
Thecc.01G274600 Theobroma cacao HOM05D008542 ORTHO05D009486 1.0e-07 59.7 69 49.3
CAN.G1549.25 Capsicum annuum HOM05D008542 ORTHO05D009486 1.4e-07 59.3 63 46.0
PGSC0003DMG400019321 Solanum tuberosum HOM05D008542 ORTHO05D009486 1.8e-07 58.9 69 39.1
COL.COLO4_11871 Corchorus olitorius HOM05D008542 ORTHO05D009486 2.3e-07 58.5 70 48.6
Peaxi162Scf00572g00215 Petunia axillaris HOM05D011159 ORTHO05D009486 2.3e-07 58.5 68 47.1
Sopen09g027230 Solanum pennellii HOM05D008542 ORTHO05D009486 2.3e-07 58.5 69 39.1
PGSC0003DMG400020057 Solanum tuberosum HOM05D008542 ORTHO05D009486 5.2e-07 57.4 68 47.1
Nitab4.5_0002636g0060 Nicotiana tabacum HOM05D011159 ORTHO05D009486 1.5e-06 55.8 85 38.8
ClCG06G002410 Citrullus lanatus HOM05D011255 ORTHO05D009486 2.0e-06 55.5 76 46.1
Solyc06g084180.3 Solanum lycopersicum HOM05D008542 ORTHO05D009486 3.3e-06 54.7 68 44.1
Sopen06g035560 Solanum pennellii HOM05D008542 ORTHO05D009486 3.3e-06 54.7 68 44.1
Nn1g02377 Nelumbo nucifera HOM05D008542 ORTHO05D009486 9.7e-06 53.1 65 44.6


User provided reference genes

Program Settings