Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 4.8e-113 411.4 240 100.0
Prupe.3G008100 Prunus persica HOM05D018099 ORTHO05D020712 1.4e-43 180.6 216 56.5
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 3.3e-37 159.5 235 50.2
Sabra14G0087500 Salix brachista HOM05D009154 ORTHO05D004310 3.8e-33 146.0 275 41.8
MD09G1285700 Malus domestica HOM05D018099 ORTHO05D020712 9.3e-32 141.4 241 47.3
AUR62011764 Chenopodium quinoa HOM05D009154 ORTHO05D004310 2.7e-31 139.8 246 41.1
MELO3C015909.2 Cucumis melo HOM05D009154 ORTHO05D004310 1.5e-29 134.0 217 46.1
Sed0022617 Sechium edule HOM05D009154 ORTHO05D004310 1.9e-29 133.7 219 48.9
MELO3C012929.2 Cucumis melo HOM05D009154 ORTHO05D004310 2.2e-28 130.2 243 42.0
Hund16457 Selenicereus undatus HOM05D009154 ORTHO05D004310 2.2e-28 130.2 232 43.1
AUR62024610 Chenopodium quinoa HOM05D009154 ORTHO05D004310 6.3e-28 128.6 251 39.8
Medtr1g086670 Medicago truncatula HOM05D012173 ORTHO05D004310 1.4e-27 127.5 235 46.4
CsaV3_3G026560 Cucumis sativus L. HOM05D009154 ORTHO05D004310 1.8e-27 127.1 243 41.6
Sed0019931 Sechium edule HOM05D009154 ORTHO05D004310 1.8e-27 127.1 211 43.6
PGR044G0657 Punica granatum HOM05D009154 ORTHO05D004310 4.5e-26 122.5 217 42.4
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 7.6e-26 121.7 254 38.6
ClCG09G004940 Citrullus lanatus HOM05D009154 ORTHO05D004310 1.3e-25 120.9 230 41.7
Sed0013714 Sechium edule HOM05D009154 ORTHO05D004310 3.8e-25 119.4 224 42.4
ClCG10G011600 Citrullus lanatus HOM05D009154 ORTHO05D004310 6.5e-25 118.6 214 41.6
Lalb_Chr02g0146911 Lupinus albus HOM05D012173 ORTHO05D004310 1.9e-24 117.1 238 39.1
Lalb_Chr06g0166981 Lupinus albus HOM05D012173 ORTHO05D004310 1.9e-24 117.1 239 43.9
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 2.1e-23 113.6 216 38.9
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 3.0e-22 109.8 238 41.2
CsaV3_7G030120 Cucumis sativus L. HOM05D009154 ORTHO05D004310 5.1e-22 109.0 235 44.3
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 8.7e-22 108.2 214 43.5
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 1.5e-21 107.5 214 42.1
TWI18G0583 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 1.3e-20 104.4 236 42.8
Duzib211G0633 Durio zibethinus HOM05D009814 ORTHO05D004310 2.2e-20 103.6 214 42.5
VMungo0720G2010 Vigna mungo HOM05D012173 ORTHO05D004310 2.2e-20 103.6 228 42.1
Ah.11g049040 Amaranthus hybridus HOM05D009154 ORTHO05D004310 3.7e-20 102.8 237 37.1
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 3.7e-20 102.8 238 40.8
Psat6g160360 Pisum sativum HOM05D012173 ORTHO05D004310 6.3e-20 102.1 234 38.5
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 8.2e-20 101.7 228 41.7
Ciclev10021807m.g Citrus clementina HOM05D009814 ORTHO05D004310 1.4e-19 100.9 237 35.9
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 2.4e-19 100.1 214 39.7
Eucgr.K03556 Eucalyptus grandis HOM05D009154 ORTHO05D004310 2.4e-19 100.1 220 42.3
GSVIVG01028151001 Vitis vinifera HOM05D009814 ORTHO05D004310 5.3e-19 99.0 245 39.2
ECA236G0385 Erigeron canadensis HOM05D009154 ORTHO05D004310 1.2e-18 97.8 213 36.2
MD17G1278300 Malus domestica HOM05D018099 ORTHO05D020712 7.7e-18 95.1 184 40.8
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 1.0e-17 94.7 240 39.2
Sed0003021 Sechium edule HOM05D009154 ORTHO05D004310 2.2e-17 93.6 216 37.5
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 5.0e-17 92.4 240 39.2
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 5.0e-17 92.4 245 40.8
RcHm_v2.0_Chr3g0487151 Rosa chinensis HOM05D018099 ORTHO05D020712 8.5e-17 91.7 204 39.7
Atru.chr5.960 Acer truncatum HOM05D009814 ORTHO05D004310 1.1e-16 91.3 234 38.5
Gohir.D08G141000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 1.9e-16 90.5 239 38.5
DCAR_005743 Daucus carota HOM05D009154 ORTHO05D004310 5.5e-16 89.0 213 32.9
TWI36G1520 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 5.5e-16 89.0 238 39.9
Glyma.02G010700 Glycine max HOM05D012173 ORTHO05D004310 7.2e-16 88.6 245 37.6
HanXRQChr04g0108411 Helianthus annuus HOM05D009154 ORTHO05D004310 1.2e-15 87.8 225 35.1
Sc17g0000300 Simmondsia chinensis HOM05D009814 ORTHO05D004310 2.7e-15 86.7 240 37.1
EL10As5g23572 Beta vulgaris HOM05D009154 ORTHO05D004310 3.6e-15 86.3 246 35.0
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 6.1e-15 85.5 237 37.6
Gohir.A11G108100 Gossypium hirsutum HOM05D009814 ORTHO05D004310 7.9e-15 85.1 214 39.7
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 3.0e-14 83.2 234 33.3
Rhsim06G0057500 Rhododendron simsii HOM05D009814 ORTHO05D004310 1.5e-13 80.9 244 34.8
Oeu038954.2 Olea europaea HOM05D016587 ORTHO05D004310 3.3e-13 79.7 224 33.5
Lju926C3T5 Lonicera japonica HOM05D009154 ORTHO05D004310 4.4e-13 79.3 179 39.1
CSS0049163 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 7.4e-13 78.6 247 36.4
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 9.7e-13 78.2 184 41.8
Cpa.g.sc18.87 Carica papaya HOM05D009814 ORTHO05D004310 1.3e-12 77.8 234 36.3
DCAR_026994 Daucus carota HOM05D007634 ORTHO05D004310 1.3e-12 77.8 239 35.1
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 2.2e-12 77.0 233 36.5
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 8.2e-12 75.1 243 36.2
arahy.Tifrunner.gnm1.ann1.WF3AWK Arachis hypogaea HOM05D012173 ORTHO05D004310 2.4e-11 73.6 218 34.4
Lj3A834G63 Lonicera japonica HOM05D007634 ORTHO05D004310 2.4e-11 73.6 232 33.6
SHI33194 Sapria himalayana HOM05D059735 ORTHO05D050806 4.1e-11 72.8 178 41.6
TPR.G33868 Trifolium pratense HOM05D007634 ORTHO05D004310 6.9e-11 72.0 237 32.5
arahy.Tifrunner.gnm1.ann1.DQ3PTC Arachis hypogaea HOM05D012173 ORTHO05D004310 9.1e-11 71.6 226 30.1
Ciclev10002618m.g Citrus clementina HOM05D013055 ORTHO05D014149 1.2e-10 71.2 184 33.2
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 1.5e-10 70.9 229 36.7
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 2.6e-10 70.1 233 35.6
Gorai.007G121100 Gossypium raimondii HOM05D009814 ORTHO05D004310 2.6e-10 70.1 210 36.7
CSS0041924 Camellia sinensis var. sinensis HOM05D015885 ORTHO05D012930 1.0e-09 68.2 196 37.2
FAN09G2530 Fragaria x ananassa HOM05D018542 ORTHO05D014149 1.0e-09 68.2 191 31.9
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 2.2e-09 67.0 234 33.8
FAN26G2306 Fragaria x ananassa HOM05D018099 ORTHO05D020712 3.8e-09 66.2 214 35.0
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 3.8e-09 66.2 184 41.3
Lj5g0021212 Lotus japonicus HOM05D012173 ORTHO05D004310 8.5e-09 65.1 233 37.3
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 8.5e-09 65.1 239 34.3
FvH4_1g26900 Fragaria vesca HOM05D018099 ORTHO05D020712 1.4e-08 64.3 214 34.1
Sc13g0007130 Simmondsia chinensis HOM05D007634 ORTHO05D004310 1.4e-08 64.3 234 29.5
ECA247G1084 Erigeron canadensis HOM05D009154 ORTHO05D004310 1.9e-08 63.9 214 28.0
FAN19G2429 Fragaria x ananassa HOM05D018099 ORTHO05D020712 2.5e-08 63.5 214 34.1
Glyma.10G011100 Glycine max HOM05D012173 ORTHO05D004310 2.5e-08 63.5 239 33.9
Hma1.2p1_3252F.1_g334510 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 3.2e-08 63.2 112 42.9
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 3.2e-08 63.2 236 33.5
SalBow3G0760 Salvia bowleyana HOM05D020384 ORTHO05D012930 3.2e-08 63.2 179 34.6
THA.LOC104825933 Tarenaya hassleriana HOM05D009037 ORTHO05D011187 3.2e-08 63.2 233 36.1
ECA233G3364 Erigeron canadensis HOM05D009154 ORTHO05D004310 9.4e-08 61.6 220 32.3
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 9.4e-08 61.6 234 32.5
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 1.2e-07 61.2 234 34.6
Sabra02G0163200 Salix brachista HOM05D009814 ORTHO05D004310 1.2e-07 61.2 110 40.9
TPR.G31752 Trifolium pratense HOM05D012173 ORTHO05D004310 1.2e-07 61.2 239 35.1
Actinidia25864 Actinidia chinensis HOM05D009814 ORTHO05D004310 2.1e-07 60.5 107 35.5
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 2.7e-07 60.1 232 34.5
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 3.6e-07 59.7 234 32.9
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 4.7e-07 59.3 239 33.5
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 6.1e-07 58.9 237 34.2
CARHR001700 Cardamine hirsuta HOM05D009037 ORTHO05D011187 8.0e-07 58.5 183 38.8
Ca_10269_v3 Cicer arietinum L. HOM05D012173 ORTHO05D004310 8.0e-07 58.5 236 36.9
DCAR_002881 Daucus carota HOM05D009154 ORTHO05D004310 1.0e-06 58.2 227 35.2
CiPaw.07G030700 Carya illinoinensis HOM05D013055 ORTHO05D014149 1.4e-06 57.8 182 33.5
SalBow5G2792 Salvia bowleyana HOM05D017048 ORTHO05D018530 1.4e-06 57.8 66 54.5
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 2.3e-06 57.0 234 32.5
Atru.chr2.269 Acer truncatum HOM05D013055 ORTHO05D004310 3.0e-06 56.6 182 31.9
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 3.0e-06 56.6 80 46.2
FAN12G0129 Fragaria x ananassa HOM05D007634 ORTHO05D004310 3.9e-06 56.2 234 32.1
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 3.9e-06 56.2 82 41.5
Potri.014G118000 Populus trichocarpa HOM05D009814 ORTHO05D004310 5.2e-06 55.8 182 35.2
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 5.2e-06 55.8 232 34.5
vmacro01576 Vaccinium macrocarpon HOM05D013055 ORTHO05D012930 5.2e-06 55.8 190 31.6
Oeu062262.2 Olea europaea HOM05D016587 ORTHO05D019830 6.7e-06 55.5 246 31.3


User provided reference genes

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