Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 3.3e-68 261.5 129 100.0
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 1.0e-53 213.4 129 79.8
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 3.9e-53 211.5 121 81.0
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 1.5e-52 209.5 122 82.0
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 1.3e-51 206.5 118 82.2
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 3.7e-51 204.9 128 76.6
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 4.8e-51 204.5 121 78.5
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 8.2e-51 203.8 128 75.8
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 3.1e-50 201.8 119 83.2
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 4.1e-50 201.4 134 72.4
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 5.3e-50 201.1 119 77.3
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 9.1e-50 200.3 119 76.5
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 9.1e-50 200.3 119 78.2
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 1.2e-49 199.9 118 80.5
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 2.6e-49 198.7 131 71.0
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 3.5e-49 198.4 121 76.9
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 4.5e-49 198.0 118 79.7
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 4.5e-49 198.0 119 78.2
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 5.9e-49 197.6 118 78.8
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 1.0e-48 196.8 118 78.8
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 1.0e-48 196.8 129 69.8
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 1.7e-48 196.1 119 76.5
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 2.2e-48 195.7 119 76.5
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 5.0e-48 194.5 129 73.6
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 5.0e-48 194.5 117 80.3
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 8.5e-48 193.7 119 78.2
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 1.5e-47 193.0 128 73.4
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 1.5e-47 193.0 117 77.8
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 1.9e-47 192.6 127 73.2
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 3.2e-47 191.8 118 75.4
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 5.5e-47 191.0 118 75.4
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 5.5e-47 191.0 132 71.2
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 9.4e-47 190.3 117 76.9
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 9.4e-47 190.3 118 76.3
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 9.4e-47 190.3 118 75.4
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.2e-46 189.9 127 71.7
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 2.1e-46 189.1 129 69.0
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 2.1e-46 189.1 132 69.7
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 2.7e-46 188.7 124 73.4
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 3.6e-46 188.3 129 71.3
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 4.7e-46 188.0 118 72.0
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 4.7e-46 188.0 129 71.3
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 4.7e-46 188.0 124 70.2
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 1.0e-45 186.8 126 68.3
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 2.3e-45 185.7 120 72.5
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 4.0e-45 184.9 111 79.3
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 5.2e-45 184.5 122 70.5
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 4.4e-44 181.4 129 65.9
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 4.4e-44 181.4 119 68.9
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 5.7e-44 181.0 118 70.3
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 1.3e-43 179.9 116 69.8
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 1.3e-43 179.9 116 75.0
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 1.3e-43 179.9 128 66.4
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 4.8e-43 177.9 153 59.5
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 6.3e-43 177.6 100 82.0
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 1.4e-42 176.4 122 66.4
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 1.4e-42 176.4 124 66.9
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 5.3e-42 174.5 116 69.0
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 7.0e-42 174.1 116 69.0
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 9.1e-42 173.7 118 66.9
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 9.1e-42 173.7 118 67.8
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 9.1e-42 173.7 118 67.8
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 9.1e-42 173.7 118 67.8
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 9.1e-42 173.7 118 67.8
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 9.1e-42 173.7 156 59.0
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 1.0e-40 170.2 119 69.7
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 1.3e-40 169.9 129 62.8
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 1.7e-40 169.5 118 65.3
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 2.2e-40 169.1 116 65.5
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 2.9e-40 168.7 122 64.8
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 8.5e-40 167.2 109 69.7
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 8.5e-40 167.2 122 63.1
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 1.1e-39 166.8 118 63.6
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 4.2e-39 164.9 103 75.7
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 5.5e-39 164.5 118 64.4
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 1.6e-38 162.9 120 67.5
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 2.1e-38 162.5 129 58.1
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 2.1e-38 162.5 117 66.7
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 5.7e-36 154.5 122 61.5
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 3.7e-35 151.8 117 61.5
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 1.1e-34 150.2 129 58.9
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 1.7e-32 142.9 114 61.4
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 2.0e-28 129.4 77 76.6
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 3.7e-27 125.2 129 48.1
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 4.9e-27 124.8 79 74.7
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 1.4e-26 123.2 88 69.3
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 1.6e-25 119.8 119 47.9
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 1.6e-25 119.8 78 71.8
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 1.6e-22 109.8 123 46.3
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 9.8e-20 100.5 59 78.0
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 1.7e-19 99.8 85 62.4
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 2.4e-18 95.9 107 46.7
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 8.0e-14 80.9 104 44.2
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 2.6e-12 75.9 85 48.2
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 7.0e-10 67.8 98 42.9
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 1.2e-09 67.0 51 58.8


User provided reference genes

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