Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p017912 Quercus lobata HOM05D008852 ORTHO05D010731 9.3e-43 176.4 85 100.0
Haze_08906 Corylus avellana HOM05D008852 ORTHO05D010731 5.8e-21 104.0 85 63.5
Haze_08910 Corylus avellana HOM05D008852 ORTHO05D010731 5.8e-21 104.0 85 63.5
Cfa012137 Carpinus fangiana HOM05D008852 ORTHO05D010731 3.8e-20 101.3 85 60.0
CiPaw.12G095900 Carya illinoinensis HOM05D008852 ORTHO05D010731 1.4e-19 99.4 85 58.8
CiPaw.11G138500 Carya illinoinensis HOM05D008852 ORTHO05D010731 2.5e-19 98.6 85 58.8
Prupe.5G095200 Prunus persica HOM05D008852 ORTHO05D010731 1.8e-17 92.4 86 54.7
Potri.003G124000 Populus trichocarpa HOM05D008852 ORTHO05D010731 8.2e-15 83.6 81 51.9
Potri.001G107400 Populus trichocarpa HOM05D008852 ORTHO05D010731 4.1e-14 81.3 80 50.0
Hma1.2p1_0514F.1_g169790 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 6.9e-14 80.5 86 51.2
Hma1.2p1_3255F.1_g334555 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 6.9e-14 80.5 86 51.2
Manes.02G024700 Manihot esculenta HOM05D008852 ORTHO05D010731 4.5e-13 77.8 79 44.3
Glyma.05G205400 Glycine max HOM05D008852 ORTHO05D010731 5.9e-13 77.4 87 47.1
Manes.01G064900 Manihot esculenta HOM05D008852 ORTHO05D010731 7.7e-13 77.0 79 45.6
Thecc.03G275000 Theobroma cacao HOM05D008852 ORTHO05D010731 2.2e-12 75.5 79 48.1
DCAR_008411 Daucus carota HOM05D008852 ORTHO05D010731 3.8e-12 74.7 85 47.1
Ciclev10023081m.g Citrus clementina HOM05D008852 ORTHO05D010731 6.5e-12 73.9 71 49.3
Glyma.08G012300 Glycine max HOM05D008852 ORTHO05D010731 1.9e-11 72.4 87 44.8
Phvul.002G287300 Phaseolus vulgaris HOM05D008852 ORTHO05D010731 4.2e-11 71.2 87 42.5
Potri.002G228000 Populus trichocarpa HOM05D008852 ORTHO05D010731 9.4e-11 70.1 81 43.2
COL.COLO4_34424 Corchorus olitorius HOM05D008852 ORTHO05D010731 7.9e-10 67.0 76 47.4
Lalb_Chr05g0224961 Lupinus albus HOM05D008852 ORTHO05D010731 7.9e-10 67.0 87 41.4
Eucgr.D01882 Eucalyptus grandis HOM05D008852 ORTHO05D010731 3.0e-09 65.1 80 42.5
Medtr8g096970 Medicago truncatula HOM05D008852 ORTHO05D010731 3.0e-09 65.1 89 42.7
Gohir.D08G198700 Gossypium hirsutum HOM05D008852 ORTHO05D010731 3.9e-09 64.7 88 40.9
Lj4g0016563 Lotus japonicus HOM05D008852 ORTHO05D010731 6.7e-09 63.9 90 45.6
Gohir.A08G179900 Gossypium hirsutum HOM05D008852 ORTHO05D010731 8.8e-09 63.5 88 39.8
Gorai.004G209500 Gossypium raimondii HOM05D008852 ORTHO05D010731 1.5e-08 62.8 88 39.8
PGSC0003DMG400003065 Solanum tuberosum HOM05D008852 ORTHO05D010731 9.7e-08 60.1 86 45.3
Gohir.D03G152700 Gossypium hirsutum HOM05D008852 ORTHO05D010731 3.7e-07 58.2 88 43.2
Gorai.003G160300 Gossypium raimondii HOM05D008852 ORTHO05D010731 3.7e-07 58.2 88 43.2
CSS0030299 Camellia sinensis var. sinensis HOM05D012645 ORTHO05D010731 8.2e-07 57.0 76 39.5
Nn1g01419 Nelumbo nucifera HOM05D008852 ORTHO05D010731 1.4e-06 56.2 80 38.8
Cc08_g14310 Coffea canephora HOM05D008852 ORTHO05D010731 1.8e-06 55.8 85 37.6
Gohir.A03G015400 Gossypium hirsutum HOM05D008852 ORTHO05D010731 1.8e-06 55.8 80 43.8
FAN04G1088 Fragaria x ananassa HOM05D008852 ORTHO05D010731 5.3e-06 54.3 41 58.5


User provided reference genes

Program Settings