Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 0.0e+00 1607.4 826 100.0
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 0.0e+00 1317.4 826 82.7
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 0.0e+00 1314.3 826 82.1
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 0.0e+00 1248.4 826 78.8
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 0.0e+00 1141.3 829 72.0
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 0.0e+00 1134.8 828 72.1
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 0.0e+00 1132.5 828 71.5
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 0.0e+00 1113.6 829 70.3
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 0.0e+00 1111.7 829 70.3
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 0.0e+00 1104.4 831 70.5
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 0.0e+00 1077.4 828 69.2
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 0.0e+00 1077.0 822 69.1
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 0.0e+00 1077.0 830 67.7
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 4.0e-308 1061.2 827 67.1
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 2.6e-307 1058.5 827 67.6
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 3.5e-304 1048.1 828 67.1
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 1.1e-302 1043.1 834 66.3
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 2.1e-301 1038.9 827 65.8
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.1e-300 1036.6 828 67.9
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 1.4e-300 1036.2 820 67.0
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 2.4e-300 1035.4 829 66.9
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 5.8e-299 1030.8 815 67.0
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 5.8e-299 1030.8 832 65.6
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.7e-298 1029.2 820 66.3
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 2.5e-294 1015.4 827 65.4
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 3.3e-294 1015.0 827 64.4
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 9.6e-294 1013.4 793 66.6
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 1.6e-293 1012.7 832 64.5
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 6.6e-287 990.7 829 62.8
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 9.6e-286 986.9 799 65.0
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.1e-285 985.7 844 61.8
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.1e-284 983.4 844 61.7
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.9e-282 975.3 829 64.2
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 4.6e-280 968.0 824 62.1
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 1.3e-277 959.9 833 60.1
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 1.6e-277 959.5 827 61.3
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 2.8e-277 958.7 829 60.8
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 2.8e-277 958.7 827 61.4
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 4.8e-277 958.0 828 60.6
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 1.8e-276 956.1 828 61.0
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 2.0e-275 952.6 828 60.5
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 1.3e-274 949.9 828 60.9
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 2.4e-273 945.7 828 60.3
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 7.1e-273 944.1 810 63.5
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 1.5e-270 936.4 827 59.5
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 3.3e-270 935.3 828 60.0
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 7.4e-270 934.1 795 62.4
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 1.3e-269 933.3 827 61.1
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 2.1e-269 932.6 830 58.9
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 2.8e-269 932.2 827 59.3
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 4.0e-268 928.3 823 60.1
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 1.0e-266 923.7 831 59.7
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 4.9e-266 921.4 831 59.0
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 1.1e-265 920.2 831 59.4
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 7.9e-264 914.1 778 61.7
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 1.0e-263 913.7 831 59.6
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 7.6e-259 897.5 842 57.5
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 2.7e-256 889.0 828 58.1
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 6.3e-253 877.9 828 57.1
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 4.2e-249 865.1 826 58.0
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 2.7e-248 862.4 834 57.9
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 2.7e-248 862.4 817 57.4
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 7.9e-248 860.9 829 55.7
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 1.4e-247 860.1 819 57.3
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 2.3e-247 859.4 830 55.9
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 1.7e-245 853.2 838 55.7
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 2.6e-243 845.9 805 57.0
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 2.6e-243 845.9 651 68.7
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 8.5e-242 840.9 799 57.7
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 8.5e-242 840.9 805 56.9
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 1.1e-241 840.5 817 56.8
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 1.9e-241 839.7 795 58.2
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 1.6e-240 836.6 799 56.1
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 2.1e-240 836.3 833 56.4
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 2.1e-240 836.3 801 56.7
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 8.0e-240 834.3 762 58.9
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 1.8e-239 833.2 804 56.3
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 7.4e-238 827.8 803 56.4
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 5.3e-236 821.6 804 56.1
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 2.0e-235 819.7 612 70.8
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 2.6e-235 819.3 744 58.1
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 4.5e-235 818.5 740 58.4
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 5.5e-233 811.6 803 55.8
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.1e-232 809.7 607 69.7
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 2.8e-229 799.3 840 54.0
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 3.6e-224 782.3 804 54.6
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 9.8e-222 774.2 834 52.3
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 2.2e-221 773.1 807 53.2
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 8.3e-221 771.2 793 54.6
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 7.0e-220 768.1 840 51.2
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 5.8e-206 721.8 821 49.2
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 3.0e-194 682.9 552 67.2
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 6.6e-186 655.2 610 58.0
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 6.2e-184 648.7 843 45.4
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 2.4e-183 646.7 750 52.3
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 5.4e-180 635.6 579 59.4
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 1.1e-177 627.9 795 44.8
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.8e-175 620.5 483 68.1
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 4.8e-152 542.7 424 67.7
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 7.1e-148 528.9 783 45.6
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 1.5e-137 494.6 814 40.0
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 2.3e-130 470.7 517 50.3
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 7.7e-126 455.7 353 68.3
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 5.3e-111 406.4 486 53.9
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.5e-108 397.5 313 67.4
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 3.3e-92 344.0 315 61.3
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 4.4e-89 333.6 908 29.4
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 1.7e-88 331.6 267 63.7
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 2.0e-86 324.7 866 29.4
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 3.6e-83 313.9 223 73.1
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 1.3e-72 278.9 222 66.2
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 4.6e-70 270.4 822 28.7
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 1.5e-60 238.8 397 37.8
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 2.4e-58 231.5 246 49.6
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 2.1e-54 218.4 555 29.2
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 2.3e-53 214.9 576 31.8
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 9.0e-50 203.0 223 52.5
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 1.8e-29 135.6 216 43.1
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 3.6e-22 111.3 71 76.1
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 3.8e-16 91.3 452 23.0


User provided reference genes

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