Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p015760 Quercus lobata HOM05D000027 ORTHO05D016286 3.0e-66 255.0 125 100.0
QL07p001466 Quercus lobata HOM05D000186 ORTHO05D001124 8.6e-21 104.0 60 86.7
QL03p070155 Quercus lobata HOM05D000053 ORTHO05D000035 1.1e-15 87.0 50 86.0
QL10p066404 Quercus lobata HOM05D000403 ORTHO05D000350 5.1e-13 78.2 44 86.4
QL12p000119 Quercus lobata HOM05D000027 ORTHO05D000066 2.3e-10 69.3 36 86.1
QL12p015765 Quercus lobata HOM05D000027 ORTHO05D000066 2.3e-10 69.3 36 86.1
Haze_15077 Corylus avellana HOM05D000027 ORTHO05D000066 8.9e-10 67.4 36 80.6
QL12p015733 Quercus lobata HOM05D000027 ORTHO05D000066 1.2e-09 67.0 36 86.1
QL12p015795 Quercus lobata HOM05D000027 ORTHO05D000066 1.5e-09 66.6 36 83.3
QL04p079162 Quercus lobata HOM05D000054 ORTHO05D000286 4.4e-09 65.1 43 76.7
QL11p041692 Quercus lobata HOM05D003372 ORTHO05D004539 7.5e-09 64.3 40 80.0
QL07p006180 Quercus lobata HOM05D001971 ORTHO05D016286 9.9e-09 63.9 31 96.8
QL12p015673 Quercus lobata HOM05D000027 ORTHO05D000066 9.9e-09 63.9 36 80.6
QL02p079488 Quercus lobata HOM05D000027 ORTHO05D000066 3.7e-08 62.0 36 80.6
QL02p079518 Quercus lobata HOM05D000027 ORTHO05D000066 3.7e-08 62.0 36 80.6
QL10p063084 Quercus lobata HOM05D000403 ORTHO05D000350 3.7e-08 62.0 32 93.8
MD16G1231000 Malus domestica HOM05D000027 ORTHO05D000066 8.3e-08 60.8 36 72.2
QL04p036684 Quercus lobata HOM05D005763 ORTHO05D016286 8.3e-08 60.8 31 93.5
QL04p096082 Quercus lobata HOM05D000027 ORTHO05D000066 8.3e-08 60.8 36 75.0
QL02p079535 Quercus lobata HOM05D000027 ORTHO05D000066 1.1e-07 60.5 36 75.0
QL04p096262 Quercus lobata HOM05D000027 ORTHO05D000066 1.1e-07 60.5 36 75.0
QL12p000414 Quercus lobata HOM05D000027 ORTHO05D000066 1.9e-07 59.7 36 75.0
Prupe.4G236900 Prunus persica HOM05D000027 ORTHO05D000066 2.4e-07 59.3 33 81.8
Dinv12708 Davidia involucrata HOM05D000027 ORTHO05D000066 3.2e-07 58.9 36 77.8
QL02p051225 Quercus lobata HOM05D000027 ORTHO05D000066 3.2e-07 58.9 38 73.7
QL12p000421 Quercus lobata HOM05D000027 ORTHO05D000066 3.2e-07 58.9 65 52.3
Dinv26424 Davidia involucrata HOM05D000027 ORTHO05D000066 7.1e-07 57.8 36 75.0
QL02p051214 Quercus lobata HOM05D000027 ORTHO05D000066 7.1e-07 57.8 38 71.1
QL02p079510 Quercus lobata HOM05D000027 ORTHO05D000066 7.1e-07 57.8 36 75.0
MD09G1142800 Malus domestica HOM05D000027 ORTHO05D000066 9.2e-07 57.4 33 78.8
Prupe.3G190600 Prunus persica HOM05D000027 ORTHO05D000066 9.2e-07 57.4 36 72.2
Prupe.3G190800 Prunus persica HOM05D000027 ORTHO05D000066 9.2e-07 57.4 36 72.2
Prupe.4G236700 Prunus persica HOM05D000027 ORTHO05D000066 9.2e-07 57.4 36 77.8
Prupe.4G236800 Prunus persica HOM05D000027 ORTHO05D000066 9.2e-07 57.4 36 77.8
Prupe.4G237000 Prunus persica HOM05D000027 ORTHO05D000066 9.2e-07 57.4 36 77.8
RcHm_v2.0_Chr2g0154031 Rosa chinensis HOM05D000027 ORTHO05D000066 9.2e-07 57.4 36 72.2
MD16G1231100 Malus domestica HOM05D000027 ORTHO05D000066 1.2e-06 57.0 36 66.7
MD17G1125400 Malus domestica HOM05D000027 ORTHO05D000066 1.2e-06 57.0 34 76.5
FAN04G0540 Fragaria x ananassa HOM05D000027 ORTHO05D000066 1.6e-06 56.6 65 50.8
FAN04G1344 Fragaria x ananassa HOM05D000027 ORTHO05D000066 1.6e-06 56.6 65 50.8
FAN13G0853 Fragaria x ananassa HOM05D000027 ORTHO05D000066 1.6e-06 56.6 65 50.8
Dinv12710 Davidia involucrata HOM05D000027 ORTHO05D000066 2.1e-06 56.2 36 75.0
Prupe.3G188500 Prunus persica HOM05D000027 ORTHO05D000066 2.1e-06 56.2 30 80.0
Prupe.4G237300 Prunus persica HOM05D000027 ORTHO05D000066 2.1e-06 56.2 33 78.8
FvH4_6g39814 Fragaria vesca HOM05D000027 ORTHO05D000066 2.7e-06 55.8 36 69.4
FAN14G1706 Fragaria x ananassa HOM05D000027 ORTHO05D000066 2.7e-06 55.8 34 76.5
FAN14G2226 Fragaria x ananassa HOM05D000027 ORTHO05D000066 2.7e-06 55.8 36 69.4
MD09G1142300 Malus domestica HOM05D000027 ORTHO05D000066 2.7e-06 55.8 36 72.2
CiPaw.03G274800 Carya illinoinensis HOM05D000027 ORTHO05D000066 3.5e-06 55.5 35 74.3
Dinv08188 Davidia involucrata HOM05D000027 ORTHO05D000066 3.5e-06 55.5 65 50.8
Dinv20420 Davidia involucrata HOM05D000027 ORTHO05D000066 3.5e-06 55.5 36 66.7
FAN02G2526 Fragaria x ananassa HOM05D000027 ORTHO05D000066 3.5e-06 55.5 36 69.4
MD17G1125800 Malus domestica HOM05D000027 ORTHO05D000066 3.5e-06 55.5 36 75.0
vmacro00966 Vaccinium macrocarpon HOM05D000027 ORTHO05D000066 3.5e-06 55.5 108 40.7
FvH4_5g36980 Fragaria vesca HOM05D000027 ORTHO05D000066 4.6e-06 55.1 65 49.2
FAN18G0792 Fragaria x ananassa HOM05D000027 ORTHO05D000066 4.6e-06 55.1 65 49.2
MD09G1142500 Malus domestica HOM05D000027 ORTHO05D000066 4.6e-06 55.1 33 72.7
MD09G1142900 Malus domestica HOM05D000027 ORTHO05D000066 4.6e-06 55.1 32 78.1
Prupe.1G053100 Prunus persica HOM05D000027 ORTHO05D000066 4.6e-06 55.1 36 63.9
Prupe.3G188800 Prunus persica HOM05D000027 ORTHO05D000066 4.6e-06 55.1 36 66.7
Prupe.3G189100 Prunus persica HOM05D000027 ORTHO05D000066 4.6e-06 55.1 36 75.0
Prupe.3G189300 Prunus persica HOM05D000027 ORTHO05D000066 4.6e-06 55.1 36 75.0
Prupe.3G190300 Prunus persica HOM05D000027 ORTHO05D000066 4.6e-06 55.1 34 73.5
Prupe.3G190500 Prunus persica HOM05D000027 ORTHO05D000066 4.6e-06 55.1 28 85.7
QL02p051142 Quercus lobata HOM05D000027 ORTHO05D000066 4.6e-06 55.1 38 73.7
QL02p051186 Quercus lobata HOM05D000027 ORTHO05D000066 4.6e-06 55.1 38 73.7
RcHm_v2.0_Chr2g0154061 Rosa chinensis HOM05D000027 ORTHO05D000066 4.6e-06 55.1 36 66.7
Haze_12736 Corylus avellana HOM05D000027 ORTHO05D000066 6.0e-06 54.7 35 74.3
Dinv41763 Davidia involucrata HOM05D000027 ORTHO05D000066 6.0e-06 54.7 65 49.2
FvH4_6g39842 Fragaria vesca HOM05D000027 ORTHO05D000066 6.0e-06 54.7 30 76.7
Prupe.1G053500 Prunus persica HOM05D000027 ORTHO05D000066 6.0e-06 54.7 30 73.3
Prupe.3G190100 Prunus persica HOM05D000027 ORTHO05D000066 6.0e-06 54.7 29 79.3
Prupe.4G236600 Prunus persica HOM05D000027 ORTHO05D000066 6.0e-06 54.7 36 75.0
RcHm_v2.0_Chr2g0154371 Rosa chinensis HOM05D000027 ORTHO05D000066 6.0e-06 54.7 34 73.5
TWI32G0301 Tripterygium wilfordii HOM05D000027 ORTHO05D000066 6.0e-06 54.7 36 72.2
TWI60G0304 Tripterygium wilfordii HOM05D000027 ORTHO05D000066 6.0e-06 54.7 36 72.2
FvH4_6g39792 Fragaria vesca HOM05D000027 ORTHO05D000066 7.8e-06 54.3 34 67.6
FvH4_6g39872 Fragaria vesca HOM05D000027 ORTHO05D000066 7.8e-06 54.3 42 61.9
FAN02G4527 Fragaria x ananassa HOM05D000027 ORTHO05D000066 7.8e-06 54.3 34 67.6
FAN14G3115 Fragaria x ananassa HOM05D000027 ORTHO05D000066 7.8e-06 54.3 34 67.6
MD13G1226000 Malus domestica HOM05D000027 ORTHO05D000066 7.8e-06 54.3 36 66.7
Prupe.1G053300 Prunus persica HOM05D000027 ORTHO05D000066 7.8e-06 54.3 31 71.0


User provided reference genes

Program Settings