Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 3.9e-123 444.9 238 100.0
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 1.8e-104 382.9 240 84.6
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.1e-98 363.6 239 80.3
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 7.0e-96 354.4 242 78.1
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 9.1e-96 354.0 243 77.4
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 5.9e-95 351.3 243 77.0
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 1.0e-94 350.5 240 78.8
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 3.8e-94 348.6 240 75.8
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.4e-93 346.7 241 77.2
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 3.2e-93 345.5 239 78.2
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 4.2e-93 345.1 239 77.0
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 4.2e-93 345.1 239 77.0
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 5.5e-93 344.7 241 75.9
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 9.4e-93 344.0 242 74.8
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.2e-92 343.6 248 75.4
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 1.6e-92 343.2 219 83.6
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 2.1e-92 342.8 240 75.0
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 2.7e-92 342.4 238 77.7
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 6.1e-92 341.3 241 75.9
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 3.9e-91 338.6 240 74.6
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 3.9e-91 338.6 242 74.4
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 3.3e-90 335.5 242 72.7
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 7.4e-90 334.3 238 73.5
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 7.4e-90 334.3 238 74.4
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 2.8e-89 332.4 240 72.5
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 2.8e-89 332.4 240 74.6
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 1.4e-88 330.1 242 74.8
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 2.6e-87 325.9 240 73.3
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 7.7e-87 324.3 240 72.1
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 2.2e-86 322.8 234 75.6
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 2.9e-86 322.4 242 71.1
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 3.8e-86 322.0 238 71.8
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 3.8e-86 322.0 239 72.0
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 6.5e-86 321.2 241 68.0
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 1.9e-85 319.7 238 72.7
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 9.4e-85 317.4 242 69.4
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 9.4e-85 317.4 235 69.8
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 1.2e-84 317.0 215 75.3
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 1.2e-84 317.0 232 72.0
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 1.2e-84 317.0 242 70.2
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 2.1e-84 316.2 238 71.0
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 2.7e-84 315.8 244 68.0
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 2.7e-84 315.8 241 70.1
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 3.6e-84 315.5 251 70.5
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 4.7e-84 315.1 207 78.3
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 2.3e-83 312.8 244 67.6
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 2.3e-83 312.8 239 70.7
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 3.0e-83 312.4 238 69.3
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 8.8e-83 310.8 244 69.3
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 3.3e-82 308.9 203 79.8
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.3e-81 307.0 245 68.6
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 1.3e-81 307.0 226 69.9
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 2.2e-81 306.2 241 67.2
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 8.2e-81 304.3 242 65.7
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 1.1e-80 303.9 240 67.9
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 1.4e-80 303.5 238 67.6
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 1.4e-80 303.5 229 69.9
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.8e-80 303.1 240 67.5
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 2.4e-80 302.8 214 74.8
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 3.1e-80 302.4 242 66.9
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 4.1e-80 302.0 238 66.4
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 4.1e-80 302.0 245 66.9
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 4.1e-80 302.0 207 75.8
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 5.3e-80 301.6 241 68.5
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 5.3e-80 301.6 214 74.3
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 7.0e-80 301.2 238 67.2
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 9.1e-80 300.8 212 71.7
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 1.2e-79 300.4 234 67.5
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 1.2e-79 300.4 238 66.4
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 2.7e-79 299.3 229 67.7
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 4.5e-79 298.5 229 67.7
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 4.5e-79 298.5 214 73.8
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 1.0e-78 297.4 238 66.4
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 2.2e-78 296.2 238 66.0
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 3.8e-78 295.4 238 66.0
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 3.8e-78 295.4 238 66.0
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 5.0e-78 295.0 238 66.0
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 5.0e-78 295.0 238 65.5
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 1.1e-77 293.9 243 64.6
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.1e-77 293.9 241 66.8
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.2e-76 290.4 239 66.5
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 1.6e-76 290.0 221 70.6
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 2.7e-76 289.3 233 67.4
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 4.7e-76 288.5 246 63.8
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 2.3e-75 286.2 239 66.9
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 3.0e-75 285.8 223 66.8
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 8.8e-75 284.3 249 62.7
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 6.3e-73 278.1 224 64.7
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 1.4e-72 276.9 241 61.0
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 1.8e-72 276.6 234 63.7
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 2.4e-72 276.2 233 65.7
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 6.6e-70 268.1 228 61.4
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 4.4e-66 255.4 190 71.1
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 2.3e-62 243.0 211 61.6
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 5.0e-62 241.9 220 60.5
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 8.6e-62 241.1 172 74.4
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 2.5e-61 239.6 219 57.5
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 3.3e-61 239.2 246 58.1
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 1.1e-56 224.2 205 59.0
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 2.6e-50 203.0 226 49.6
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 4.7e-44 182.2 238 49.6
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 1.4e-40 170.6 183 56.8
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 6.0e-39 165.2 228 45.2
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 7.8e-39 164.9 118 72.0
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.2e-36 157.5 98 84.7
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 1.6e-31 140.6 120 67.5
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 2.4e-27 126.7 245 39.6
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 1.7e-25 120.6 79 79.7
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 3.8e-17 92.8 205 33.2
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 8.7e-14 81.6 156 34.0
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 2.8e-12 76.6 64 64.1
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 1.2e-10 71.2 52 69.2
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 2.7e-07 60.1 46 65.2


User provided reference genes

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