Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p013646 Quercus lobata HOM05D000610 ORTHO05D004774 1.7e-34 148.7 69 100.0
Thhalv10016127m.g Eutrema salsugineum HOM05D000610 ORTHO05D004774 1.3e-10 69.3 43 81.4
Sp4g23940 Schrenkiella parvula HOM05D000610 ORTHO05D004774 1.3e-10 69.3 43 81.4
Carub.0004s2397 Capsella rubella HOM05D000610 ORTHO05D004774 2.9e-10 68.2 43 81.4
Atru.chr1.1122 Acer truncatum HOM05D000610 ORTHO05D004774 3.8e-10 67.8 45 80.0
Atru.chr1.1123 Acer truncatum HOM05D000610 ORTHO05D004774 3.8e-10 67.8 45 80.0
Aa31LG1G23710 Aethionema arabicum HOM05D000610 ORTHO05D004774 4.9e-10 67.4 35 94.3
AL4G40000 Arabidopsis lyrata HOM05D000610 ORTHO05D004774 4.9e-10 67.4 35 94.3
AT2G41700 Arabidopsis thaliana HOM05D000610 ORTHO05D004774 4.9e-10 67.4 35 94.3
A03p23380 Brassica napus HOM05D000610 ORTHO05D004774 4.9e-10 67.4 35 94.3
C03p27900 Brassica napus HOM05D000610 ORTHO05D004774 4.9e-10 67.4 35 94.3
BolC3t15161H Brassica oleracea HOM05D000610 ORTHO05D004774 4.9e-10 67.4 35 94.3
BraA03t11555Z Brassica rapa HOM05D000610 ORTHO05D004774 4.9e-10 67.4 35 94.3
CARHR136790 Cardamine hirsuta HOM05D000610 ORTHO05D004774 4.9e-10 67.4 35 94.3
Haze_19838 Corylus avellana HOM05D000610 ORTHO05D004774 4.9e-10 67.4 35 94.3
THA.LOC104824436 Tarenaya hassleriana HOM05D000610 ORTHO05D004774 4.9e-10 67.4 35 94.3
Cfa016807 Carpinus fangiana HOM05D000610 ORTHO05D004774 1.4e-09 65.9 35 91.4
CANSAT80G2124 Cannabis sativa HOM05D000610 ORTHO05D004774 1.9e-09 65.5 35 91.4
CiPaw.09G038900 Carya illinoinensis HOM05D000610 ORTHO05D004774 1.9e-09 65.5 35 91.4
SGA_v2.0_scaffold69G23121 Striga asiatica HOM05D000610 ORTHO05D004774 1.9e-09 65.5 35 91.4
TWI53G1231 Tripterygium wilfordii HOM05D000610 ORTHO05D004774 1.9e-09 65.5 35 91.4
TWI74G1635 Tripterygium wilfordii HOM05D000610 ORTHO05D004774 1.9e-09 65.5 35 91.4
Cpa.g.sc224.8 Carica papaya HOM05D000610 ORTHO05D004774 2.4e-09 65.1 44 77.3
Hma1.2p1_1280F.1_g272560 Hydrangea macrophylla HOM05D000610 ORTHO05D004774 2.4e-09 65.1 35 88.6
Ciclev10004128m.g Citrus clementina HOM05D000610 ORTHO05D004774 3.2e-09 64.7 35 88.6
Potri.006G049300 Populus trichocarpa HOM05D000610 ORTHO05D004774 3.2e-09 64.7 35 88.6
COL.COLO4_08236 Corchorus olitorius HOM05D000610 ORTHO05D004774 4.2e-09 64.3 35 88.6
Duzib128G1628 Durio zibethinus HOM05D000610 ORTHO05D004774 4.2e-09 64.3 35 88.6
Gohir.A01G131111 Gossypium hirsutum HOM05D000610 ORTHO05D004774 4.2e-09 64.3 35 88.6
Gohir.D01G120000 Gossypium hirsutum HOM05D000610 ORTHO05D004774 4.2e-09 64.3 35 88.6
Gorai.002G146400 Gossypium raimondii HOM05D000610 ORTHO05D004774 4.2e-09 64.3 35 88.6
MBI19_g35693_MAGBIO Magnolia biondii HOM05D000610 ORTHO05D004774 4.2e-09 64.3 35 88.6
Thecc.05G148900 Theobroma cacao HOM05D000610 ORTHO05D004774 4.2e-09 64.3 35 88.6
ATR0188G019 Amborella trichopoda HOM05D000610 ORTHO05D004774 5.4e-09 63.9 44 70.5
CSS0003889 Camellia sinensis var. sinensis HOM05D000610 ORTHO05D004774 5.4e-09 63.9 35 88.6
CSS0013319 Camellia sinensis var. sinensis HOM05D000610 ORTHO05D004774 5.4e-09 63.9 35 88.6
CAN.G676.30 Capsicum annuum HOM05D000610 ORTHO05D004774 7.1e-09 63.5 35 88.6
ECA247G3032 Erigeron canadensis HOM05D000610 ORTHO05D004774 7.1e-09 63.5 35 88.6
Migut.J01749 Erythranthe guttata HOM05D000610 ORTHO05D004774 7.1e-09 63.5 35 88.6
HanXRQChr10g0300621 Helianthus annuus HOM05D000610 ORTHO05D004774 7.1e-09 63.5 35 88.6
Lsat_1_v5_gn_9_30620 Lactuca sativa HOM05D000610 ORTHO05D004774 7.1e-09 63.5 35 88.6
Manes.09G020400 Manihot esculenta HOM05D000610 ORTHO05D004774 7.1e-09 63.5 35 88.6
Nitab4.5_0002328g0010 Nicotiana tabacum HOM05D000610 ORTHO05D004774 7.1e-09 63.5 35 88.6
PSO384G3904 Papaver somniferum HOM05D000610 ORTHO05D004774 7.1e-09 63.5 35 88.6
Peaxi162Scf00130g00325 Petunia axillaris HOM05D000610 ORTHO05D004774 7.1e-09 63.5 35 88.6
TAR633G1531 Trochodendron aralioides HOM05D000610 ORTHO05D004774 7.1e-09 63.5 35 88.6
VMungo1383G0969 Vigna mungo HOM05D000610 ORTHO05D004774 7.1e-09 63.5 36 86.1
MSTRG.6422 Avicennia marina HOM05D000610 ORTHO05D004774 9.3e-09 63.2 35 85.7
Dinv18665 Davidia involucrata HOM05D000610 ORTHO05D004774 9.3e-09 63.2 35 85.7
Oeu023112.1 Olea europaea HOM05D000610 ORTHO05D004774 9.3e-09 63.2 35 85.7
SalBow6G0358 Salvia bowleyana HOM05D000610 ORTHO05D004774 9.3e-09 63.2 35 85.7
SalBow6G6580 Salvia bowleyana HOM05D000610 ORTHO05D004774 9.3e-09 63.2 35 85.7
Duzib093G2237 Durio zibethinus HOM05D000610 ORTHO05D004774 1.2e-08 62.8 35 85.7
vmacro07837 Vaccinium macrocarpon HOM05D000610 ORTHO05D004774 1.2e-08 62.8 35 85.7
Cc06_g17650 Coffea canephora HOM05D000610 ORTHO05D004774 1.6e-08 62.4 35 85.7
DCAR_020495 Daucus carota HOM05D000610 ORTHO05D004774 1.6e-08 62.4 35 85.7
Eucgr.A02339 Eucalyptus grandis HOM05D000610 ORTHO05D004774 1.6e-08 62.4 35 85.7
FvH4_6g24100 Fragaria vesca HOM05D000610 ORTHO05D004774 1.6e-08 62.4 35 85.7
FAN02G4008 Fragaria x ananassa HOM05D000610 ORTHO05D004774 1.6e-08 62.4 35 85.7
FAN09G1277 Fragaria x ananassa HOM05D000610 ORTHO05D004774 1.6e-08 62.4 35 85.7
FAN14G3175 Fragaria x ananassa HOM05D000610 ORTHO05D004774 1.6e-08 62.4 35 85.7
Rhsim03G0027100 Rhododendron simsii HOM05D000610 ORTHO05D004774 1.6e-08 62.4 35 85.7
RcHm_v2.0_Chr3g0482761 Rosa chinensis HOM05D000610 ORTHO05D004774 1.6e-08 62.4 35 85.7
Sed0024936 Sechium edule HOM05D000610 ORTHO05D004774 1.6e-08 62.4 35 85.7
ClCG04G003390 Citrullus lanatus HOM05D000610 ORTHO05D004774 2.1e-08 62.0 35 82.9
MELO3C023103.2 Cucumis melo HOM05D000610 ORTHO05D004774 2.1e-08 62.0 35 82.9
CsaV3_4G011860 Cucumis sativus L. HOM05D000610 ORTHO05D004774 2.1e-08 62.0 35 82.9
Lju124C43G3 Lonicera japonica HOM05D000610 ORTHO05D004774 2.1e-08 62.0 34 88.2
MD12G1079400 Malus domestica HOM05D000610 ORTHO05D004774 2.1e-08 62.0 35 82.9
Nn7g36312 Nelumbo nucifera HOM05D000610 ORTHO05D004774 2.1e-08 62.0 39 79.5
Solyc04g015970.3 Solanum lycopersicum HOM05D000610 ORTHO05D004774 2.1e-08 62.0 34 88.2
Sopen04g007980 Solanum pennellii HOM05D000610 ORTHO05D004774 2.1e-08 62.0 34 88.2
TAR636G1590 Trochodendron aralioides HOM05D000610 ORTHO05D004774 2.1e-08 62.0 35 85.7
arahy.Tifrunner.gnm1.ann1.50CUSQ Arachis hypogaea HOM05D000610 ORTHO05D004774 2.7e-08 61.6 35 85.7
Lj1g0005409 Lotus japonicus HOM05D000610 ORTHO05D004774 2.7e-08 61.6 35 85.7
Lalb_Chr25g0287161 Lupinus albus HOM05D000610 ORTHO05D004774 2.7e-08 61.6 35 85.7
Medtr7g091380 Medicago truncatula HOM05D000610 ORTHO05D004774 2.7e-08 61.6 35 85.7
Nitab4.5_0000586g0130 Nicotiana tabacum HOM05D000610 ORTHO05D004774 2.7e-08 61.6 35 85.7
Phvul.001G131150 Phaseolus vulgaris HOM05D000610 ORTHO05D004774 2.7e-08 61.6 35 85.7
Psat3g072960 Pisum sativum HOM05D000610 ORTHO05D004774 2.7e-08 61.6 35 85.7
TPR.G3701 Trifolium pratense HOM05D000610 ORTHO05D004774 2.7e-08 61.6 35 85.7
EL10Ac3g07101 Beta vulgaris HOM05D000610 ORTHO05D004774 3.5e-08 61.2 43 72.1
PGR004G2234 Punica granatum HOM05D000610 ORTHO05D004774 3.5e-08 61.2 35 82.9
Sc13g0001650 Simmondsia chinensis HOM05D000610 ORTHO05D004774 3.5e-08 61.2 35 82.9
Ah.04g151590 Amaranthus hybridus HOM05D000610 ORTHO05D004774 4.6e-08 60.8 43 72.1
CDE05G0129 Ceratophyllum demersum HOM05D000610 ORTHO05D004774 4.6e-08 60.8 39 76.9
AUR62026051 Chenopodium quinoa HOM05D000610 ORTHO05D004774 4.6e-08 60.8 43 72.1
Ca_08444_v3 Cicer arietinum L. HOM05D000610 ORTHO05D004774 4.6e-08 60.8 35 82.9
Glyma.03G136000 Glycine max HOM05D000610 ORTHO05D004774 4.6e-08 60.8 35 82.9
Prupe.7G058100 Prunus persica HOM05D000610 ORTHO05D004774 4.6e-08 60.8 35 80.0
HPP92_019408 Vanilla planifolia HOM05D000610 ORTHO05D004774 4.6e-08 60.8 45 71.1
AUR62024461 Chenopodium quinoa HOM05D000610 ORTHO05D004774 6.0e-08 60.5 35 82.9
Aqoxy1G00231 Aquilegia oxysepala HOM05D000610 ORTHO05D004774 7.9e-08 60.1 35 80.0
SMO266G0031 Selaginella moellendorffii HOM05D000610 ORTHO05D004774 7.9e-08 60.1 35 82.9
GSVIVG01033258001 Vitis vinifera HOM05D000610 ORTHO05D004774 7.9e-08 60.1 35 80.0


User provided reference genes

Program Settings