Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p011282 Quercus lobata HOM05D011274 ORTHO05D012136 0.0e+00 1320.8 663 100.0
QL08p064279 Quercus lobata HOM05D011274 ORTHO05D012136 2.1e-113 414.1 649 43.8
QL08p063661 Quercus lobata HOM05D011274 ORTHO05D012136 5.4e-98 362.8 520 45.4
QL08p063692 Quercus lobata HOM05D011274 ORTHO05D012136 2.7e-97 360.5 511 45.6
QL08p063682 Quercus lobata HOM05D011274 ORTHO05D012136 7.1e-90 335.9 489 45.2
QL08p045355 Quercus lobata HOM05D011274 ORTHO05D012136 7.1e-82 309.3 469 43.7
QL08p064561 Quercus lobata HOM05D011274 ORTHO05D012136 1.3e-67 261.9 615 33.3
QL07p010955 Quercus lobata HOM05D011274 ORTHO05D012136 2.5e-58 231.1 432 37.0
QL10p018154 Quercus lobata HOM05D011274 ORTHO05D012136 4.5e-52 210.3 434 33.4
QL07p010851 Quercus lobata HOM05D011274 ORTHO05D012136 1.4e-37 162.2 283 37.8
QL07p010661 Quercus lobata HOM05D011274 ORTHO05D012136 1.9e-34 151.8 282 36.5
vmacro10955 Vaccinium macrocarpon HOM05D011274 ORTHO05D012136 3.6e-25 120.9 403 27.5
Rhsim06G0012900 Rhododendron simsii HOM05D011274 ORTHO05D012136 8.9e-24 116.3 430 29.5
QL08p016266 Quercus lobata HOM05D011274 ORTHO05D012136 1.7e-22 112.1 315 29.8
AUR62032965 Chenopodium quinoa HOM05D037678 ORTHO05D012136 5.4e-21 107.1 368 26.6
Ah.09g227600 Amaranthus hybridus HOM05D037678 ORTHO05D012136 9.2e-21 106.3 373 27.1
Rhsim06G0014500 Rhododendron simsii HOM05D000059 ORTHO05D012136 9.2e-21 106.3 391 27.1
Ah.04g152630 Amaranthus hybridus HOM05D014492 ORTHO05D015818 1.1e-16 92.8 396 26.8
Ah.04g152570 Amaranthus hybridus HOM05D014492 ORTHO05D015818 1.2e-15 89.4 399 26.1
Ah.04g152650 Amaranthus hybridus HOM05D014492 ORTHO05D015818 1.4e-13 82.4 399 25.1
COL.COLO4_16992 Corchorus olitorius HOM05D017991 ORTHO05D020493 2.4e-13 81.6 401 24.7
Ah.03g147960 Amaranthus hybridus HOM05D037678 ORTHO05D012136 2.1e-12 78.6 357 24.9
COL.COLO4_16993 Corchorus olitorius HOM05D017991 ORTHO05D020493 3.3e-10 71.2 252 26.6
AUR62010232 Chenopodium quinoa HOM05D014492 ORTHO05D015818 5.6e-10 70.5 368 25.8
QL08p015662 Quercus lobata HOM05D011274 ORTHO05D012136 1.2e-09 69.3 126 34.1
AUR62010225 Chenopodium quinoa HOM05D014492 ORTHO05D015818 4.7e-09 67.4 388 24.0
AUR62010229 Chenopodium quinoa HOM05D014492 ORTHO05D015818 4.7e-09 67.4 388 24.0
vmacro12005 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 8.1e-09 66.6 262 24.8
Rhsim04G0245000 Rhododendron simsii HOM05D019272 ORTHO05D020252 1.2e-07 62.8 243 25.1
CSS0029958 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 2.0e-07 62.0 256 24.6
CSS0000622 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 3.4e-07 61.2 263 25.1
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 7.5e-07 60.1 205 27.3
TWI79G0211 Tripterygium wilfordii HOM05D022892 ORTHO05D014676 1.7e-06 58.9 255 25.1
Dinv24224 Davidia involucrata HOM05D015193 ORTHO05D005682 4.9e-06 57.4 154 28.6


User provided reference genes

Program Settings